Leishmania mexicana: LMXM_29_0540
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Entry
LMXM_29_0540 CDS
T02288
Name
(RefSeq) putative nuclear cap binding protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
lmi
Leishmania mexicana
Pathway
lmi03013
Nucleocytoplasmic transport
lmi03015
mRNA surveillance pathway
lmi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMXM_29_0540
09122 Translation
03013 Nucleocytoplasmic transport
LMXM_29_0540
03015 mRNA surveillance pathway
LMXM_29_0540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmi03019
]
LMXM_29_0540
03041 Spliceosome [BR:
lmi03041
]
LMXM_29_0540
Messenger RNA biogenesis [BR:
lmi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
LMXM_29_0540
Spliceosome [BR:
lmi03041
]
Common components
Common spliceosomal components
Cap binding complex
LMXM_29_0540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Phospho_p8
Motif
Other DBs
NCBI-GeneID:
13451380
NCBI-ProteinID:
XP_003877201
UniProt:
E9B0H9
LinkDB
All DBs
Position
29:complement(173799..174365)
Genome browser
AA seq
188 aa
AA seq
DB search
MSSDLVDTVPRMEYVDRHELLRSLLTTEEFRERRQEQLNYSTTVYVGNLSFYTTEEQVYN
HFSPCGHVRDIVMGLNEETRSPCGFCFVVFESQAAAALAVHGFDGSLLDDRVVSVSWDVG
CDRSRRWGRGAHGGQVVDGVRQNLDEGRGGLGALRRDALGVPASTAEDELVVYDWVEAPP
KCRGARTN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgatttggtggacacggtcccccgaatggagtatgtggatcgccacgagttg
ctccggtctctcttgacgacggaggagttccgggagcggcgacaggagcagctcaactat
agcaccaccgtctatgtgggcaacttgtccttctacacgacggaggagcaagtgtacaat
cattttagcccctgtggacacgtccgcgatatcgtgatgggcctcaacgaggagacacgc
tctccttgcgggttctgctttgtcgtgttcgagtcacaggcggcagcggcactggcggtt
cacggattcgacggatcactactggacgaccgcgtcgtgtctgttagctgggatgtgggc
tgcgacaggagtcgccgctgggggcgtggtgctcacggcggccaagtggtagacggggtt
cgccaaaacctcgacgagggtcgcggtggcttgggcgccctacggcgcgacgcgctgggc
gtgcctgcctcgaccgcagaggacgagctggtcgtctacgattgggtagaggccccaccg
aagtgcagaggtgcccggacaaattag
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