Leishmania mexicana: LMXM_31_0310
Help
Entry
LMXM_31_0310 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K19672
intraflagellar transport protein 140
Organism
lmi
Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmi03037
]
LMXM_31_0310
Cilium and associated proteins [BR:
lmi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
LMXM_31_0310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_2nd
TPR_IF140_C
Beta-prop_IFT140_1st
WD40_CDC20-Fz
TPR_COPA_B
WD40_WDHD1_1st
WDR55
TPR_GEMI5
Beta-prop_RIG_2nd
TPR_19
Frtz
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
13453460
NCBI-ProteinID:
XP_003877871
UniProt:
E9B2F2
LinkDB
All DBs
Position
31:complement(108146..113113)
Genome browser
AA seq
1655 aa
AA seq
DB search
MSLFVVNTPNHEGQLKEHLIAAHKRKPLLATAWVNPPSVLITNSEGEVLTPVTEPAGSTG
CTHQPMALTWHPSEALLLIGWSNGEMSLWSMPSVSSLALGEDYTAAAALTAVQSIAARAA
TQSDVEGAVREHGAGAVLAAEWSTRGLYLVSASQQRHVVMWMLEQTPTETSVSFKLKPLW
SVQACEPVVGIFHVPGKAAHSPTAFNAYDGAAAAAAAEGGDDDISFLLADGSSSLAAINE
DQQLFPCVRQQEAIVSVLYDATSRTLVTLTTTCMVEVYRVGEGIKGSSMLRRKLSAPSTT
ATTSAATGGRITMSMVWASPGVVAFGCDDDRVRVLDLSNESMDVLMLPQPDLHVSSLATF
AAKGILTVGTVEGVLAVFQHRAASLSTVHHALEARETTTINSPFAAAAGVASQWEAIAVH
QVGKCVDRVVFTAFGDVALCRGGSELQVLHEIIRKRSWDGVAAVTQISSDMVVIESVTGC
QCLLQNKGNVRGLSIAFPNIAIWNGSQIDLYIINEVASEFTFVNFVMTTSPAFAIHRDGL
IYVKGNRIIFETMQLAPIAQMTFTESEGIPVIIDIMNDYLVAVSSKNYLRLARVSSRDLQ
QVGPARPLTFPSASEPTPSDTASGAPAAGPFAAKDTNALEVSVSTARVNAQGRRVALMTS
LGPLALPDTRIWVYDSDTDKMSSFDFGSRNEMPNSVYWNTPEPNTSTIGEFEYILLACET
YQIHMDDKKAASEEVATPKAGTDGINDKNGSADRPAGQENFPEALQNMENYAEKKAELED
ARRGSVGATNYVAQRAHNIVTLFATHDGLVVQNVASMRRYQICLVGLTIPDFLLASVKIN
GNPSNAEDYVIEQKRLRDFEGLKSDKDVAVREALMKFSYYATIGNMDEAYRCVKSIKNPA
AWQGLARLCVTSGRLDVAAVCLATMEDCVAARALREAREEYPDDKGVQLATLALGLGMTE
EAEELLRKSKRYDLLTDVYMACGKFEHAQRHSERFDRARIRPVAYKYAQFMESLQNMDAA
IMWYYNAKCAGTDVPRIFFQTNRMHELRQLMVTQSQSPSPSAGASAPTAQPGRDERQSAF
AATFPQNRELLLWWAQHSERRRNVQEALRFYHAGEDVYNIVRILCSLTPPKLDSAVQLVN
KEMEKAKTRFQQQQAFAAAAPMHCGDDDQGEPDPVGAAYFVGQLYERQGNAQLALQYYQA
AGAYRSGVRVAWKTEQYGTVVNLAIKSTDERLMLETAMALEKQQAYDKAVQLYRRIGAVQ
CALDACVRGGLYETLHEVSATFANGSTDPAVFLGMADHFQSEGDYQKAVEMLLFAKHFDE
ALKLCETRGVTLTEEMAESMTSDMGKLSMEERQAVLRRVAHIAKDQGSCSLACKKYTQAG
DRVKAMRMLMRGGETEKVIFFANHSRNVEIYTMAANFLQSQNWSTDASIYKSIILFYTKA
KAWTNLLVFYESCAQLHIDENRNYPEALRALEDCIAMTESGSAGKANIDSDKVEQLKRRV
EVLKAFVKAQKTVDSMVVADRGSVAEKAKADSVIASCSDIIKRSRPSSPDHDLIQDALRI
GDVFALMVRFYFDKLGESNNALKVMESMSKHGADPQLFIETDYMERVCQANGKSLANVLP
GVMAAGAPGAVWEGARKESTDTRRSSVIDEVDRAV
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttttcgtggtaaacactcccaaccatgaggggcagctgaaggagcacctcatc
gcagcgcacaagcgcaagccgctcctcgccaccgcgtgggtgaatccgccctcagtgctc
atcacgaacagtgaaggtgaggtgctgaccccggtgacggagcctgccggctcgacggga
tgcacgcatcagccaatggcattgacatggcaccccagcgaggcgcttctcttgattggg
tggagcaacggggagatgagcttgtggtcgatgccgtcggtgagcagccttgccttgggt
gaggactacaccgcggcagccgcactcaccgctgtgcagtccattgcagcgagggcggct
acgcaaagtgacgtggagggcgcagttcgcgaacacggcgccggagcagtgctggccgcg
gagtggtcgacgcgtggtctgtatctcgtctccgcatcacagcagcgccacgtggtgatg
tggatgctggagcagacccccaccgagacgagcgtcagctttaagctgaagcccctctgg
tccgtccaggcgtgtgagccagttgtgggcatctttcacgtccctggcaaggccgctcac
tctccgacagcgttcaatgcgtacgatggcgctgccgctgccgctgctgcagagggcggc
gatgacgacataagcttccttctcgccgacggcagcagctctctagcggccatcaacgag
gatcaacagctttttccgtgcgtaagacagcaggaggcaattgtgtccgtgctttacgac
gccacaagccgcaccctcgttacacttaccacaacctgcatggttgaggtgtatcgtgta
ggcgaaggcatcaagggtagctcgatgctgcggcgtaagctatcggctccctccaccacg
gctactacgtctgccgcgacgggcgggcggattaccatgtcaatggtgtgggcgtcgcct
ggtgtcgtggccttcggctgcgacgatgatcgcgtgcgcgtcttagacctctcgaacgag
tcgatggatgtgctgatgctcccgcagccggacctgcacgtgtcgtccttggcgaccttc
gctgccaaaggcatcctgacggtcggtaccgtggagggcgtcctggcggtttttcagcac
cgagctgcgtccctgtcgacagtccaccatgctttagaggcgagggaaacaacgaccatc
aactccccgttcgctgcggctgccggggtggcaagccagtgggaggcgatagcggtgcac
caggttggcaagtgcgtcgaccgagttgtcttcacggcttttggcgatgtggcgttgtgt
cgtggtggctcggagctgcaggtattgcacgagatcatccgcaagcgctcctgggacggc
gtcgcggcggtgacgcagatttcgtcggacatggtggtgatcgagagtgtcacgggatgc
cagtgcctgctacagaataaggggaacgtgcgtgggctctccatcgcgttccccaacatc
gccatatggaacgggtcgcagatcgacctatacatcatcaacgaggtcgcatccgaattc
acgttcgtgaactttgtgatgacgacgagccctgccttcgccatacaccgcgacggcctc
atctacgtcaagggcaaccgtatcatattcgagacgatgcagctcgcccccatcgcacag
atgacttttaccgagtccgaaggcatcccagtgatcatagacattatgaacgactacctc
gtggcggtgtcgtcgaagaactacctgcggctcgcccgggtttcgtcgcgcgatttacag
caagtcgggccagctcgcccgctgacgtttcccagcgcatcagagccaactccctcggac
actgctagtggcgcaccagcagcggggccatttgccgccaaagacaccaatgcgctcgaa
gtgtcggtgtccacggcgcgtgtgaacgcgcaaggccgtcgggtcgccttgatgaccagc
ctgggacccctcgcgctgcctgatacgcgcatctgggtgtacgactccgacacagacaaa
atgtcgtcctttgacttcggcagccgcaatgagatgccgaactccgtctactggaacaca
ccagagccgaacacgagcaccatcggcgagttcgagtacatcctgcttgcctgtgagaca
taccagatccacatggatgacaagaaggcggcatcagaagaggtggcgacgccaaaggcc
ggtacggacggcatcaacgacaagaacgggagcgccgatcgcccagctggccaggagaat
ttccccgaggcgttgcagaacatggagaactacgcagagaaaaaggctgagctggaggac
gcgcgccgcgggtccgttggcgccacaaactacgttgcccagcgcgcgcacaacatcgtc
acgttgttcgcaacgcacgacgggctggtcgtgcagaacgttgcgtcgatgcgacgctat
caaatttgtctggtaggcctcaccatccccgacttcctgctcgcctctgtgaagatcaac
ggcaatccgagcaacgcggaggactacgtgattgagcagaagcggttgcgcgactttgag
ggcctaaagtcggataaggacgtggctgtgcgggaagcgttgatgaagtttagctactac
gcgaccatcggcaacatggatgaggcgtaccggtgcgtcaagagcatcaagaacccggcg
gcgtggcaagggctggctcgcctgtgcgtgacgagcgggcgcctcgacgtggcggcggtg
tgcttggctacgatggaggactgcgtggccgcacgtgccttgcgagaggccagagaggag
tacccagacgacaaaggcgtgcaactggcgacgctggcgctcggcctgggcatgactgag
gaggcagaggagctactacgcaagtcgaagcggtatgacctgctgaccgatgtgtacatg
gcgtgcggcaagtttgagcacgcccagcgtcactccgagcggtttgaccgcgcccgcatt
cggccggtcgcgtacaagtacgcgcagttcatggagagccttcagaacatggatgccgcc
atcatgtggtactacaacgccaagtgcgctggcaccgatgtcccacgcatcttcttccag
acaaaccgtatgcacgagctccggcagctgatggtgacgcagagccagtcgccatcgccg
tcggccggcgccagcgcgccgacggcccagccagggcgcgatgagcgacagtccgccttt
gctgccacctttccacaaaatcgtgagctactgctgtggtgggcgcagcacagcgagcgg
cgccgcaatgtgcaggaggcgctgcgcttctatcacgctggcgaggatgtgtacaacatt
gttcgaattttatgctcactgacgccgccaaagctggacagtgcagtgcaactcgtgaat
aaggagatggaaaaggcgaagacgcgcttccagcagcagcaagcctttgccgcggcagcg
ccgatgcactgcggagacgacgaccaaggagagcccgatccagtgggtgccgcgtacttt
gtagggcagctgtacgagcgacagggcaacgctcagctggcgctgcagtattaccaggct
gccggcgcataccgcagtggtgttcgcgtcgcgtggaagacggagcagtacggtaccgta
gtgaacctggcgataaagagcactgacgagcgcctgatgctcgagacggcgatggcgcta
gagaagcagcaggcgtacgacaaggccgtgcagctgtaccgccgcatcggcgccgtgcag
tgcgccctcgatgcctgcgtgcgaggcggtctgtatgagaccctgcacgaggtgagcgcc
accttcgccaacggctccaccgatccagcggtcttcctcggcatggcggaccatttccag
agcgagggtgactaccagaaagcggtggagatgctcctcttcgcgaaacattttgatgaa
gcgctgaagctgtgcgagacacgcggtgtcactctgacagaggagatggcagagtccatg
acgagcgacatgggcaagctttccatggaagagaggcaggcggtgctgcgccgggtggcc
cacatcgccaaagatcagggcagctgctctttggcgtgcaaaaagtatacgcaggctggc
gatcgcgttaaggcaatgcggatgctcatgcgtggcggagagacagagaaggtcatcttc
ttcgcaaaccactcgcgcaacgtggagatctacaccatggccgcaaactttctgcagtcg
cagaactggagcaccgacgcgagcatctacaagagcatcattctcttctacacaaaggcg
aaggcatggacgaatcttctcgtcttctatgagtcgtgcgcgcagctgcacatcgacgag
aaccgaaactaccccgaggcgctgcgtgcgctggaggactgcatcgcgatgaccgaaagc
gggtcagcaggcaaggcgaacatagacagcgacaaggtggagcagctgaagcggcgcgtc
gaggtactgaaggcgttcgtgaaggcgcagaagacggtcgactccatggtggtcgccgac
cgtggctctgtcgcggagaaggcgaaggcggacagcgtcatcgcctcctgctctgatatc
atcaaacgcagccgcccttccagcccagatcatgatctcatacaagacgccctccgcatc
ggtgacgtgtttgctctcatggtgcgcttttactttgacaagctcggtgagtcgaacaac
gcgctgaaggtgatggagagcatgtcgaaacacggcgccgatccgcagctctttattgag
accgactacatggagcgggtctgccaggccaacggcaagtcgcttgctaacgtgctgcct
ggcgtgatggcggccggtgcccctggggcagtgtgggagggagcccgaaaggaaagcacg
gacacacgacgttccagcgtgattgatgaagtagaccgagccgtctag
DBGET
integrated database retrieval system