Leishmania mexicana: LMXM_31_0720
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Entry
LMXM_31_0720 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
lmi
Leishmania mexicana
Pathway
lmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LMXM_31_0720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmi03019
]
LMXM_31_0720
Messenger RNA biogenesis [BR:
lmi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
LMXM_31_0720
mRNA degradation factors
3'-5' decay
Pan complex
LMXM_31_0720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
DUF7589
Motif
Other DBs
NCBI-GeneID:
13453504
NCBI-ProteinID:
XP_003877915
UniProt:
E9B2J6
LinkDB
All DBs
Position
31:249500..250945
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AA seq
481 aa
AA seq
DB search
MNPVTGGIPGVANGAQMMSPTFPSPHSLYSPQHHMDVYRTNGSLSLAADPFPATPYTPIS
SLFMSPSVRNSLTTPHSVRPRRPVTHVTSSKFSMYTTIYNLEPEPKPSVMMPKVRMQIYQ
TSARYTGKDILLRRLVNVPVKEEDCAAVKEALRQYRHPNLVPLTNLFATEEFVMGSTDVI
MEYRYMSGAKSLQEAFFTEGRRATEGLLWSFTCQLVGLLRSFHETLIPLHGLHWSKIIYV
ETTGRFYFTGLGLTDLLEPRGTTVQQHILMKQDIQALGFILFQLASRNLNVKLETFTNKQ
PLPGFSQSFWELIKTCLEGHADSAQLCHALGERMSMEVGHQEGHTDFLMSQCQKEMHNGR
VMRLLIKLSFALESPAEVHEYTSENQRYVLRLFNQFLFNQVDEQNRVNVDWGHVYHCLNK
LDIGADETIQLIGTDTSNTVLVVSYADLRAMLDSVFDRVQQVSQMTTEVDPQRYTMTPGS
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggtcactggaggcattcccggagttgcgaatggcgcgcagatgatgtcgccg
acgtttccgtcgccccatagcctatacagccctcagcatcacatggatgtgtaccgcacg
aacggcagcctttctttggcggcagacccgttccccgcgacgccgtacacccccatcagt
agtctcttcatgtctccctccgtgcgcaactcgctgaccaccccgcactcggtgcggccg
cgtcgcccggtcacgcacgtcacgtcatcgaagttctccatgtacaccaccatctacaac
ctggagccggagccgaagccaagcgtgatgatgcccaaggtgcgcatgcagatataccag
acgagtgcgcggtacaccggcaaggacattcttctgcgacggcttgtgaacgtcccggtg
aaggaggaggattgtgcggcggtgaaagaggcgctgcggcagtatcggcaccccaacctg
gttccactgacgaacctcttcgccacggaggagttcgtgatgggcagcactgacgtgatc
atggagtaccgctacatgtccggggcgaagagtttgcaggaggccttttttacagaggga
cgccgcgcgacggagggactgctgtggtccttcacatgtcagctcgtcggccttctccgc
tccttccacgagacccttatccccttgcacggcttgcactggtcaaagatcatctacgtc
gagacgaccgggcgattctacttcaccggcttggggctgacagacttgctagaaccgcgc
ggcacgacggtgcagcagcacatcctcatgaagcaagacatccaagccctcggctttatc
ctcttccagctcgcctctcggaatctcaatgtcaagctggagaccttcacgaacaagcag
ccgctgcccggcttctcacagagcttctgggagctcatcaagacatgcctggaggggcac
gccgactcggcgcagctgtgccacgcgcttggtgagcgtatgtcgatggaggtgggccac
caggagggacacacggacttcctaatgtcgcagtgtcaaaaggagatgcacaacggccgt
gtgatgcgcctgctcatcaagctcagctttgctctagagtcgccggctgaagtgcacgag
tacacgtcggagaatcagcgctatgttctgcgcctcttcaaccagttcctgttcaaccag
gtggatgagcagaatcgagtgaacgtggactggggccacgtgtaccactgcctgaacaag
ctggacatcggcgctgacgagacgatccagctgattggcacagacaccagcaacaccgtg
ctcgtcgtgagctacgctgacctgcgtgccatgctcgacagcgttttcgatcgcgtgcag
caagtgtcgcagatgacgacggaggtcgaccctcagcggtacaccatgactcctggtagc
atatag
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