Leishmania mexicana: LMXM_31_1090
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Entry
LMXM_31_1090 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lmi
Leishmania mexicana
Pathway
lmi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LMXM_31_1090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmi04121
]
LMXM_31_1090
Enzymes [BR:
lmi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
LMXM_31_1090
Ubiquitin system [BR:
lmi04121
]
Ubiquitin ligases (E3)
HECT type E3
LMXM_31_1090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ZZ
DUF6771
Motif
Other DBs
NCBI-GeneID:
13453542
NCBI-ProteinID:
XP_003877953
UniProt:
E9B2N4
LinkDB
All DBs
Position
31:419756..424645
Genome browser
AA seq
1629 aa
AA seq
DB search
MDGFRFYMEGVGLPEGSMRRVNAELIGAINSPDPMVQHSGLQMLCDQLTMSSFISPSTMA
TIPLVLPSLLRCIASSQVREVFITAARALTYIIDAFPRTFETFPTRDTLMEVLLQHLRSI
QDVELSEQCITCLEMITRSQMGSRELLRNDGVEAVLGFADFFTLHKQRQIWTIVQRLVGE
MDESSVRHITACLPTLRIGMTNNDSEIRQKAIATLAQAIEGVKTDRATVETVFGDAADRI
AVLLHERDVNDDTMSSALSLLYAGVQWSAGIAASVIQSDLFNTLLSLLQPAPLPAVVAEQ
YTAPSAAGRAGHRGAVAEMVVGGDSGRDSGGDAGTEPAAARTTMLTSHQRTIVCRLLASL
LIPYRAGAAEELERLEMLTQRPLLTGAPAHGNRSGMDDGDGYDEDYTTEEDEDGEEMHDF
DDDSDADTTLTHLRQRVAQEQGLKIETKPAYARCRASGFMCDGCGKNCTPGDWYRCNECP
DKDYCTACVLEHYKDDHDGQHSYTDMEQVVGAAARNRDKLELYRKSPQLLQRVLEAIPTV
VGVCISSELVAVRTSCLDFLVSAVDMASTEQLLASEITKVSLGESLNNNLRGADLLCNAL
AVALAGRLLQKLSDIYQVQFVREGVKLSLQVLKQRCKVKGRTTLTREARAALITCTAGWG
TIIGTEASILLQRFLDVEDEQATESLRRVVEELRQDHFSTAVGLLRDVLAGDVTAFEFFS
SGVVRELRSCLSRQQNIYAVMHLVATLSTSPATTRGAKAKKSAGVAPTLAATTAGRVGHG
SGSLLSHFVHHLHTILTLLDDFAVPTYDFIGGVHNYFVVSFEPHRASVAVAGDTTAGTSP
PSVRGDGDSAVSPRQCIKARIRPISSVSAMAQVLQQEVLQQESEEGDNADGEEGEAVTNV
LPDLHPRHSPTSRDAEAPVPAGPSSPASAPENSSIWIRYGTHVLPLSMTMLQIMEHLVLP
AAAASEQEARGSHHDNAERRAKPPLQQRGKRDDTTASEEGAHEEEGARHGAHSRPAPLAT
STAAGYSLQRPVVLYYSTAPYNPQYYSLFKVPNAFPASGNPQAPLQVRLPSEDRKPRAVW
DVQEQLAGAFPYSKHVLSDSQRDVLGLLGTLYAAVANWAVLLNYVRAQAAAESKHLRGID
AACILSTFAPAISIAEFQHAKLNNKAIQQCSQMLLAGQQRGTWAVKLALDCTYLFSYSTR
KFLFDVGFTSTDRCLIQMRKYRELFGLNELRMSSEQMRGIYGQLKKETKRVWREDVLECA
KKVLSAQDARARNRVWSFHFYNENGWGDGPTREFYTLVSQELRQRKLGLWRDGNEAAGDT
EYSTAAYGLFPKPVLPGSTQEEDHLVPFFRLIGRFIGRALVDEHVPGLPLSPVFLRLLRG
DVCGVHDVQDLSEEVGRLLVAMAGAAASGHARVQLPGQTKAVEVQDLGLDFTLPGDDSVE
LCVNGAKTAVTANNMMAYCDAVTSFLLDRGVAAAVHALREGFHWYIPLVALQMLSVDELY
RLIAGHETAITRDDFEKYSKANYGYTLSCKHVQWLFDILAAFTVEEQRQFFFFLTGSAHL
PVGGLGRLRPSFTIVRKTSEDASIKEEDMLPSAMTCQNYLKLPQYNTKEEMEKKLRFAIT
EGGGVFLLS
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggacggctttcgcttttacatggagggggtcggccttccggaagggagcatgcggcgt
gtgaacgctgagcttataggcgccatcaacagccccgacccaatggtccagcacagcggc
ttgcagatgttgtgcgatcaactcacgatgagctccttcatttcgccgtccacgatggcc
actatcccgctcgttttaccgtcgctgcttcggtgcatcgcgtcgtcgcaggtgcgcgag
gtgtttatcacggccgcccgcgcgctcacctacatcattgacgcctttcctcgcaccttc
gagacgttcccaacccgtgacaccttgatggaagtgctgctgcagcacctccgctccatc
caggatgtggagctgtcggagcagtgcatcacctgcttggagatgatcacgcggagtcag
atgggaagccgcgagctgctgcgcaacgacggcgttgaggcggtgcttggcttcgccgac
ttcttcaccctccacaagcaacgtcaaatttggaccattgtgcaacggctcgtcggcgag
atggacgagagcagtgtgcggcacattactgcttgccttcccacactgcggatcggcatg
acgaacaacgactccgagatacgtcaaaaggcgatcgccacactggcgcaggccatcgaa
ggtgtcaagacggaccgggccaccgtagagaccgtgttcggcgacgcggcagaccgcatc
gcagtcctcctccacgagcgtgacgtcaacgacgacacaatgtcgtcagcgctgtccctc
ttgtacgcaggtgtgcagtggagcgccggcatcgccgcctcagtgatccaaagcgatttg
ttcaacacgctgctctccttactgcaaccagcgccgcttccagcggtagtggcggagcag
tacaccgccccatcggcggctggaagggctgggcaccgcggcgcggtggcggagatggta
gtgggaggtgactctggaagggactctggtggtgacgctggtactgagccagcagctgcg
cggacgacgatgctcacctcgcaccagcgcaccatcgtgtgccgacttttggcctctctg
ctgattccgtacagggccggcgctgctgaggagctcgagcggctggagatgctgacacag
cggccactcctcactggcgccccggcccatggcaaccggtcggggatggacgacggtgat
ggctacgacgaggactacacgacggaggaggacgaggacggggaggagatgcatgacttt
gacgatgacagcgacgccgacacgactctgacgcacctgcgtcagagggtggcgcaagag
cagggcctcaagattgagacgaagccggcgtacgcccggtgccgtgcctccggtttcatg
tgcgatggatgcggaaagaactgcactcccggtgactggtaccggtgcaacgagtgcccg
gacaaggactactgcactgcctgcgttttggagcactacaaggacgatcacgatggtcag
cacagctacacagatatggagcaggtagtgggggccgcggcgcgcaatcgggacaagctg
gagctgtaccgcaaatcgcctcagctgctccagcgtgtcttggaagccattcccacggtt
gtcggtgtgtgcatctcctctgagcttgttgcggtgcggacgtcatgcctcgactttctg
gttagcgcggtggacatggcctccacggagcagcttctcgcgagtgaaatcacgaaggtc
tcgctcggtgagtctctcaacaacaatcttcgcggcgccgatctgctctgcaacgctctc
gcggtcgctctggcgggacggctgttgcaaaagctaagtgacatctatcaagttcagttt
gtgcgcgagggcgtgaagctgagtctgcaagtgctgaagcagcgctgcaaggtgaaggga
aggacgacactcacgcgtgaggcgcgcgcagccttgataacctgcacggccggctggggc
accatcatcggcaccgaggcgtcaatactgctccagcgctttcttgatgttgaggatgag
caggcaaccgagtccctgcgtcgcgtcgtcgaggagctccgtcaagatcacttcagcacc
gcggttgggctgctgcgtgacgtgctcgctggtgacgttacggcttttgagtttttctcg
agcggcgttgtgcgggagctgcggagctgcttaagccgccagcagaacatctacgcagtg
atgcacctggtcgctacgctctccacgtctcccgccacgacgagaggtgcgaaagcgaaa
aagagtgctggcgtggcgccgacactagctgccaccaccgctgggcgggtgggtcacggc
agtggtagcctgctctcccactttgtgcaccacttacacacaatactgaccctcctcgac
gactttgccgtgcccacgtacgacttcatcggcggcgttcacaactactttgtcgtctcc
ttcgaacctcatcgcgcgtctgtcgccgtcgctggcgacacaacggcgggcacctcccct
cccagtgtacgcggcgacggcgacagcgctgtttcgccgcggcagtgcatcaaggctcgc
attcgacccatctctagcgtgagcgccatggcgcaggttctgcagcaggaggtgctgcag
caggagagcgaggaaggagacaacgccgacggcgaagaaggcgaagccgtgacaaacgtc
ctgcccgacttgcacccgcggcactcccctacgtcccgcgacgcagaagcacctgtgcca
gccggtccctcgtccccggcttcagcaccagagaacagcagcatatggattcgctatggc
acacatgtgctgccgctgtcgatgacgatgctgcagatcatggagcacctcgtccttcct
gcagcggcggcctccgaacaggaggcgcgaggcagccaccacgacaatgccgaaagaagg
gcgaagccgcctctccagcaacgcggaaagcgcgacgacaccaccgcgtcagaggagggc
gcacacgaggaggagggagcccggcacggcgcccacagccgtcccgctccgctggccaca
tcgaccgccgccgggtactccctgcagcgacctgtcgtcctctactacagcactgcccca
tataacccgcagtactactccttgttcaaggtccccaatgcattccctgccagcggcaat
ccacaggcaccgctgcaggtgcgcctgccgtcggaggaccgcaagccgagggcggtgtgg
gacgttcaagagcagcttgctggcgccttcccctacagcaagcacgtgctctccgacagc
cagcgagatgtactagggctgctcggcacgctgtacgccgcggtagcgaactgggcggtg
cttctcaactatgtgcgagcgcaagccgctgcggagtcgaagcatctgcgtggcatcgac
gccgcatgcattttgagcaccttcgcccccgccatctcaatcgctgagtttcagcacgcg
aagctcaacaacaaagcgattcagcagtgctctcagatgctgctggctggccagcaacgt
ggcacgtgggcggtgaaactcgccctggattgcacctaccttttcagctactcgacgcgc
aagttcctcttcgacgtcggcttcacgtcgacggatcgctgcttgattcaaatgcgcaag
tacagggaactctttggcttgaatgaactgcggatgtcgagtgagcaaatgagaggcatc
tacggtcagctgaagaaggagacaaagcgcgtgtggcgcgaggacgtcctggagtgcgcg
aagaaggtgctcagcgcgcaggacgcgcgggcgcggaaccgtgtctggagctttcacttc
tacaacgaaaacggctggggcgatggcccgacgcgcgagttctacaccctcgtcagccaa
gagctgcggcagcgcaagctggggctctggcgtgacggcaacgaggccgcaggtgacact
gagtacagtaccgccgcctatggcttgttcccgaaaccggtgctccccgggtcgactcag
gaggaggatcacttggtgcctttcttccgtcttattgggcgctttattggacgtgccctc
gtcgacgagcacgtgcccggcctcccgctctcaccggtcttcctccgcctcttgcgcggt
gacgtgtgcggggtccacgatgtgcaggacctcagtgaggaagtcgggcgtctgctggtt
gctatggcgggagccgccgcgagtgggcacgcgcgcgtgcagctgccagggcagacgaaa
gcggtggaggtgcaggacctcggtctcgacttcacgctcccgggcgacgacagtgtggag
ctgtgtgtgaatggggcgaagacggcggtgacggcgaacaacatgatggcctactgtgac
gccgtgacgagctttttgctcgatcgcggggttgcagcggcggtgcatgccctccgcgag
ggcttccactggtacataccgctggtggcgctgcagatgctcagcgtggacgagttgtac
cggctcatcgctggccacgagacggcaatcacgcgcgacgactttgaaaagtacagcaag
gcgaactacgggtacaccctcagctgcaagcatgtacagtggctctttgacatcctggcc
gccttcacggtggaggagcagaggcagttttttttcttcctcaccgggtctgcgcacctc
cctgtaggcggcttgggtcgactgcggccgtcctttacgattgtgcggaaaacgtccgag
gatgccagcatcaaggaagaggacatgctaccatccgccatgacgtgtcagaattacttg
aagctaccgcagtacaacacgaaagaggagatggagaagaagcttcgcttcgccataacc
gaaggcggcggcgtgttcttgctctcctag
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integrated database retrieval system
