Leishmania mexicana: LMXM_31_3920
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Entry
LMXM_31_3920 CDS
T02288
Name
(RefSeq) putative DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03022
Basal transcription factors
lmi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LMXM_31_3920
09124 Replication and repair
03420 Nucleotide excision repair
LMXM_31_3920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmi03021
]
LMXM_31_3920
03400 DNA repair and recombination proteins [BR:
lmi03400
]
LMXM_31_3920
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LMXM_31_3920
Transcription machinery [BR:
lmi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LMXM_31_3920
DNA repair and recombination proteins [BR:
lmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LMXM_31_3920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-GeneID:
13453420
NCBI-ProteinID:
XP_003878238
UniProt:
E9B3H0
LinkDB
All DBs
Position
31:1483134..1485554
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AA seq
806 aa
AA seq
DB search
MTHSLSGDARTDEKCLFVESRIESGGYITIIAESFRRSYVIIRPLLTTLAEAISRPSLMH
EYRLTPFSLGAAVSNGIDAAEATAFLETYAYGLAESSERRKLVRQFIESCMTCYNLARII
IDSDRTLVQCKNEETAQMLLRDAVIASVAATPLRIFYEESSWDENPAPYPSFLLQSRVMS
KVVAAQCVVLGLPIQQQYDFEKDTSVRTAHISLRTQTKPRRYQIEAVDAAIHDGTLNSGC
LLLPCGAGKTLLGIMLMCKVKKPTLVVCAGGVSVEQWKSQILDYAVLEAPPPTDDGDAAD
AHGGRPHQIKNGAARIACLTGKQKDPITEETDVVLTTYSMLVTAHKAKMRQQATAISSED
GLFTGRGLRKRKENPKEKLFAPYGLLILDEVHVMPAESFRESLGFVDAKGVVGLTATYVR
EDHKILDLFHLVGPKLYDISMETLASQGYLSKVHCVEVRTPMTKEFGLEYMDRSSKAARA
GKAPALVMLAAANPNKMMCVRELVWQHLDAGAKILLCCDHIMLLKEYGELLNAPVICGST
QHKERLMIFSDFQSTSKINVICVSRVGDVSVNLPNANVVIQVSSHGGSRRQEAQRLGRIL
RPKERAANGRTVDAWFYSIISMDTVEMNYAAHRTAFLVDQGYACRVMEYNPFASSVNTAL
GGVKEQVKKHRVGDVVSIKQESLYETLHQSSVLRPRSGERSGCGADAGDCRTESLSYQLE
LLSKVVSSWEIEFQQECRKRRRTAVRDADDNAADETGSADDVVEARPIRTYAAIKSEWRG
GADSANRVTALRDLVGVDDGFVYHEL
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattcactcagcggagatgctcgcacggacgaaaaatgcctcttcgttgagagc
agaatagaatcgggcggctacatcaccatcatcgcggagtcattccgcagaagctacgtg
atcatccgccctctcttgacgacactagcggaggccatctcgcggccctcgctgatgcat
gagtaccgtctgaccccgttctctctcggcgccgccgtgtcaaacgggatcgacgctgct
gaggcgaccgccttcttggagacctacgcttacggacttgcagagagcagtgaaagacgg
aaacttgtgcgccagttcattgaatcctgcatgacgtgctacaaccttgcccgcatcatt
atcgattcggataggaccctcgtgcagtgcaagaacgaggagacggctcagatgctgcta
cgcgacgccgtgatcgcgtcggtggccgcaacgccgcttcgcatattttacgaggagagc
tcttgggacgagaacccagcgccttacccttcgtttctgctgcagagcagggtgatgtca
aaggtggtggccgcccaatgcgtggtgctcggcctccctattcagcagcagtacgacttc
gagaaagacacatcagttcgcacggcgcacatctcgctgcgcacgcagacaaagccgcgc
cgatatcagattgaggcggtggatgccgccatccacgacggtaccctcaacagcggatgc
ctcctactcccctgcggtgctggaaagacgctactgggcatcatgctcatgtgcaaggtg
aagaagccgacgctggtcgtgtgcgccggcggtgtcagtgttgagcagtggaagagccaa
attctcgactatgccgtattggaagcaccaccgccgacggatgacggcgatgccgcagac
gctcatggcggtcgtccccaccaaatcaaaaacggcgctgcccgcatcgcgtgcctgacg
ggcaagcagaaggatcccatcaccgaggaaacggacgttgtgctgacaacgtacagcatg
ctggtcacggcccacaaggccaaaatgcgccaacaagcaacagcaatatccagcgaggac
ggcctgttcacgggacgtggtctacgcaagcggaaagagaaccccaaagagaagctcttc
gctccgtatggcctgctgattctggatgaggtacacgtgatgccagcggagagctttcgt
gagagtctcggcttcgttgacgccaaaggcgtcgtcggcctcaccgccacctacgtgcgc
gaagatcacaagatcctcgacctcttccacctcgtcgggccgaagctgtacgacatttct
atggagacccttgcctcacaggggtacctctccaaggttcactgcgtcgaggtgcgcaca
ccgatgacgaaggagtttgggctcgagtacatggaccgcagcagcaaagcggcacgggcg
gggaaggcgccggcgctggtgatgctggctgcggcgaacccgaacaaaatgatgtgcgta
cgggaacttgtgtggcaacatctcgacgccggcgccaaaatccttctctgctgcgaccac
atcatgctcctgaaggagtatggggaactgctgaacgcaccggtgatatgcggcagtacg
cagcacaaggagcgactgatgatcttctccgacttccagagcacttcgaagattaacgtg
atatgcgtctcgcgcgttggcgacgtgagcgtgaatctgcccaacgcaaatgtcgtgatt
caggtgtccagccacggcggcagccgccgtcaggaagcccagcgactaggccgtatcctg
cggccaaaggagcgcgccgcgaacgggaggacggtggatgcgtggttctactcgatcatc
agcatggacaccgtcgaaatgaactacgcggctcaccgcaccgccttcctcgttgaccaa
gggtacgcgtgccgcgtcatggagtacaaccctttcgcatcatcggtcaacaccgcttta
ggaggcgtgaaggagcaggtgaagaagcatcgggttggcgacgtagtgagcatcaagcag
gagtctttatacgagacgctgcaccagtcaagcgtgttgcggccgcgatcgggcgaacgc
tccgggtgcggtgccgacgctggcgactgtcgcaccgagtcgctctcgtatcagctcgag
ctgctttcaaaggtggtctccagctgggaaatcgaatttcagcaggagtgtcgcaagcgc
cgccgcaccgccgtgagggacgccgacgacaacgccgctgacgagacgggcagcgctgac
gacgtggtggaggctcgaccgattcgcacctatgccgctatcaaaagtgagtggaggggt
ggtgctgactccgcgaaccgtgtcacagcgctacgcgacctcgttggtgtcgatgatgga
tttgtgtaccacgaactctag
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