Leishmania mexicana: LMXM_32_0410
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Entry
LMXM_32_0410 CDS
T02288
Name
(RefSeq) MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
lmi
Leishmania mexicana
Pathway
lmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LMXM_32_0410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmi03400
]
LMXM_32_0410
DNA repair and recombination proteins [BR:
lmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LMXM_32_0410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_29
MnmE_helical
Motif
Other DBs
NCBI-GeneID:
13453805
NCBI-ProteinID:
XP_003878286
UniProt:
E9B3L9
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Position
32:complement(130757..133576)
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AA seq
939 aa
AA seq
DB search
MADERDGGIVQAFLALGADSIQCFRMFSRGSNPGCYVLGWWATFVANEYIKSTAVLKKWS
SGSSSSGTVDAVVVNDALCKEIIRDCLLRRGVSVEYYERETAGGSYVCRQRGSPGNITDF
EASLFEFEEAEIQLLASGSLVFGARQDTGTAIGFAALNNTLRQLSFAEYTDTLQLTSLDA
LVAQTNLKELLLCVMSSAASAGAEATFNDDDRITAVRRICERCGVQLSVRTLREVQQLQK
AEAAAKGLEALAEILRVPEERLSLELCPIARQAVENILGRIDVMDPSNQRAFYLRRTVPS
TYMKLDSAAIEALDLVSKKPEPRGTLPTSVFSWLNRCHTGMGARAMRQWLLQPLRCADDI
NQRLTMVELFVENPILRDMFTAQVLKRCGDMDRLNRKLQRRSLALKDTQAFLEFVNVVPA
ALQVLGTYTGPQSKLLKDEYVAPLEDINDHMANLKTLIEATVDFSDRNAVRMNATFDDEL
QDLHEQLTSTQRQIDKEYGRVLSKYGWNEKQLKHEYHGTYGYVFRVSRKEDRQLRSTKEL
ITVSTSKDGVRFVSEKMAALSEQYRRISDDYETRQMDLKRKLVDTIASYLPVLDDAKELI
ATLDVYVAWALVVKDCPRPMVRPVVREAPGTVTLVKQEGTGARSADAAPLLSFKGLRHPL
VELRQPAYKANPLHLTTQTNGLLITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQ
VRDAVMCRVGATDHLAQGVSTFMVEMLESASILTGATQDTLAIVDELGRGTSTYDGFGLA
WAIAQDVAVRVRATLLFSTHYHELTQLPQQCSALQNMHFGAEVDESAGTLRFSYTLQPGP
CGRSYGLYVASLAHLPESVIACAKVKVAEWETFEKEGATKSSAGAALEEKVVRKVSAYAK
RIRELEQQGPGDDHDAAVKRLKLEIQQDADVRPYLCEVA
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagcgcgacggtggtattgtgcaggcctttctggcccttggcgccgactcc
atccaatgctttcgcatgttctccagaggctccaacccgggatgctacgtgctgggctgg
tgggccacctttgtcgcgaacgagtacatcaagtccaccgccgtgctgaagaagtggtct
agcggcagctcctcctccggcacggtggacgctgtagttgtgaatgacgcactctgcaag
gagatcatccgcgactgcctgctgcggcgaggggtgtcggtggagtactacgagcgagaa
acggccggcgggtcgtacgtgtgccgccagcgcggctcgccggggaacatcacggacttt
gaggcatcgctcttcgagtttgaggaggcggagattcaactgctggcgagcggctccctt
gtgttcggtgcaaggcaggacacggggacagcgattggttttgcggcattgaataacacg
ctgcgacagttgagctttgccgagtacacggatacgctgcagctcactagcctggacgcg
cttgtcgcgcagaccaacttgaaggagcttttgttgtgtgtgatgtcatcggctgcttcc
gctggcgccgaagccaccttcaacgacgatgaccgaatcaccgcggtgcgccgtatatgt
gagcggtgcggcgtgcagctgagcgtgcgcacgctgcgcgaggttcagcagctgcagaag
gcggaagccgctgcgaaaggcctcgaggcactggcagagattctgcgagtgccagaggag
cgtctgtcgctagagctctgtccgatcgcgcggcaagccgtggagaacatcctaggccgc
atcgatgtgatggacccgtcgaatcagcgcgccttctacctgcgccgcaccgtgccgtcc
acgtacatgaagctggacagcgcggcgatcgaggcgctggacctggtgagcaagaagccg
gagccgcgcggcacccttccgacgtctgtgttctcatggctgaaccgctgtcacaccggc
atgggcgcgcgtgcgatgcggcagtggctgctgcagccgctccgctgcgccgacgacata
aaccagcgcctcaccatggtggaactcttcgtggagaaccccattctgcgcgacatgttc
acggcccaggtgctgaagcggtgcggcgacatggatcgacttaaccgcaaactgcagcgt
cgcagcctcgccctgaaggacacgcaggcgttcctggagtttgtgaatgtcgtccctgcc
gctctacaggtactgggtacctacacaggtccgcagtcgaagctcttgaaagacgagtac
gttgccccgttggaggatattaacgaccatatggcgaatctgaagacgctgatcgaggca
acagtggacttcagtgaccgcaatgcggtccgcatgaacgccacgttcgacgacgagctt
caggacctgcatgagcagctcacgagcactcagcggcagatcgacaaggagtacggccgc
gtcctgagcaagtacgggtggaatgagaagcagctcaagcacgagtaccacggcacgtat
ggctacgtcttccgcgtctctcgcaaggaggatcgccagctgcgcagcacaaaggagctt
atcacggtaagcacgtccaaggacggcgtacggtttgtgtcagagaagatggcggccctc
agcgagcagtatcggcgcattagcgacgactacgagacacggcagatggacctcaagcgc
aagcttgtggacaccatcgcctcctatctgcccgtgctcgacgacgccaaggagctgata
gcgaccctggacgtctacgtggcctgggctctcgtggtgaaggattgtccgcgccccatg
gtgcggccagttgtacgcgaggcccctggcactgtgacattggtgaagcaggaggggaca
ggcgcacgcagcgcagacgcggcgccgctcctctccttcaaggggcttcgtcatcctttg
gtagagctacgccagccggcctacaaggccaaccctctccacctcaccacgcaaaccaac
ggactgctcattaccggacccaacatgggtggcaagtccacgtacatgcgcagcgtcggt
gtcgctgtggtgctggcgcaagcgggctgctttgtgccggctgatgcggcagaggttcag
gtgcgcgacgctgtcatgtgccgagtcggcgcgaccgatcacctggcgcagggcgtctct
acgtttatggtggagatgctcgagtctgcgtcgatactcacaggtgcgacgcaggacacc
ctcgccatcgtcgacgagctcggccgcggtacgtctacgtacgacggcttcgggttggcg
tgggcgattgcccaggacgtggcggtgcgtgttcgcgcgacgctgttgttctccacccat
tatcacgagctgacgcagctaccgcagcagtgtagcgctctgcagaacatgcactttggc
gccgaggtcgacgagtcggccggaacgctgcgcttctcctacaccctccagccaggcccg
tgcggacgcagttacggcctgtacgtcgcgtcgttggcgcacctgccagagtccgtgatt
gcgtgcgccaaagtgaaggtggcggagtgggagacgtttgaaaaagagggcgccacgaag
agcagtgctggagcggcgctcgaggagaaggtggtgcggaaggtttcggcgtacgccaag
cgcatccgtgagctggaacagcagggacccggcgacgatcacgacgcggcagtaaagcgg
ctaaagctagagatccagcaggacgcagatgttcgcccgtacttgtgcgaggtggcgtag
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