Leishmania mexicana: LMXM_32_1690
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Entry
LMXM_32_1690 CDS
T02288
Name
(RefSeq) putative DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03030
DNA replication
lmi03410
Base excision repair
lmi03420
Nucleotide excision repair
lmi03430
Mismatch repair
lmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMXM_32_1690
03410 Base excision repair
LMXM_32_1690
03420 Nucleotide excision repair
LMXM_32_1690
03430 Mismatch repair
LMXM_32_1690
03440 Homologous recombination
LMXM_32_1690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmi03032
]
LMXM_32_1690
03400 DNA repair and recombination proteins [BR:
lmi03400
]
LMXM_32_1690
Enzymes [BR:
lmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMXM_32_1690
DNA replication proteins [BR:
lmi03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
LMXM_32_1690
DNA repair and recombination proteins [BR:
lmi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
LMXM_32_1690
MMR (mismatch excision repair)
DNA polymerase delta complex
LMXM_32_1690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
REV3_N
divDNApol
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
13452028
NCBI-ProteinID:
XP_003878423
UniProt:
E9B406
LinkDB
All DBs
Position
32:<655921..>659019
Genome browser
AA seq
1032 aa
AA seq
DB search
MSSSALSQWKSVARLPLPASYLDKELCFQLLDCCQTKGNPDETVSRVRHSEVPVVRLYGV
TAEGFSVLVHCYNYEPYLWIEAPPNWVDVHSQGLMRELNNQLSNQTRLQDTVVRVEAHQR
RSLMYFKGGQLVPHLKIVVQLPQHIPKLRSLLCDRGVSCPGVWDGTRIFQTFESNVIFPL
RFLVDNDIGGSNWLTLTYGKFFACSAKTSTCQIEVACSHEDVQNHEPLGDYLSIAPFRIL
SIDIECQGRKGLFPEPEHDPVIQIANHCVEYGHESEPLTKTIFTLKSCAPIAGAQVLSYE
TEAEMLLAWATFMKALDPDILTGYNICNFDFPYLLNRAAALKASDAFHYWGRQVHERTVA
RDKKFQSKQMGNREYTELTLEGRIIMDAMVVIQRDYKLRSYSLNSVSQNFLGEQKEDVHH
SIISDLQHGDEETRRRLAVYCLKDAFLPVKLLDRLMCIVNNVEMARVTGVPVGWLLERGQ
QIKVFSMLLRKAQKKKLVVPTVEYTGGSDRGYEGATVIDPIKGFYNCPVATLDFASLYPS
IIIAHNLCYSTLVRPADARLYPEDSLDRSPTSDIFVKKEVFPGILPEVLQDLLAARKHAR
AMMKDVPMNSLEYKVLNGRQLALKVSANSVYGFTGAQVGKLPCLEISASVTAYGRQMIDR
TKNLVEELYPGARVLYGDTDSVMVKCVTNEKASDKERLQAAMDFGIEAAEKVSSNFLNPI
KLEFEKVYFPYLLMNKKRYAGLLWTNTDRFDKLDAKGIETVRRDNCPLVARMVSGVLNRI
LIHRSVESAVEFVKGTISDLLLNRLDISNLVITKAFSKAEDEYAGAQAHIALVERMRQRD
PASAPTIGDRVAYVIIKAAKGAKAYERSEDPIYVLDNNIPIDTQYYLEHQLAPPILRVFE
GVLDDPSVLIKGDHTRHIAISAPSKNAGGLMRFVKIQLQCISCRAVIKAGALCDNCQDKA
PEVYGKIVAKRNHYEAIYSQVWTQCQQCQGSLNQEVICSSRDCPVFYMRKKVQKDLHEQQ
VLLDRFGVVDDW
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctctgctctgtcgcagtggaagtctgtcgcgcgcttgcctctccctgcttcg
tacctggacaaggagttgtgctttcagctcctcgactgttgccagacaaaaggaaacccg
gatgaaacggtgtcacgtgttcgtcatagcgaggtgccggtggtgcgtctctacggagtc
accgccgagggattcagtgtcttggttcactgctacaactacgagccgtatttgtggatt
gaggcgccaccgaactgggtggatgtacattctcaagggcttatgcgggagcttaacaac
cagcttagcaaccagactcgcctacaagacactgttgtgcgagtggaggcgcaccagcgc
cgcagtctcatgtacttcaaaggtggccagctggtgccacatctaaagatcgtcgtgcag
ctgccgcagcacatcccaaagctgcgcagtctcctatgcgaccgcggcgtctcgtgccct
ggggtgtgggatgggactcgcatcttccagactttcgagtcgaacgtgattttcccgctg
cgcttcctcgtcgacaacgacattggcggcagcaactggctgacgctgacctacggcaag
ttcttcgcgtgctcggccaagacgtcgacctgtcagattgaggtggcgtgttcgcacgag
gatgtgcagaaccacgaaccactcggggactacttgtccatcgcgcctttccgcatcctc
tctatcgacatcgagtgccaaggccgtaaagggctcttccctgagccggagcatgaccct
gtcattcagattgccaaccactgcgttgagtacgggcacgagtcagagccgctcacgaag
accatcttcaccctgaagagctgcgcaccgattgcgggggcgcaagtgctctcatacgaa
acggaggcggagatgctgctggcatgggccaccttcatgaaagcgctggaccccgacatc
ctgacgggctacaacatctgcaatttcgatttcccatacctgctgaaccgcgccgcagcc
ctgaaggccagcgacgcatttcactactggggcagacaagttcacgagcggacggtggcg
cgcgacaagaagttccaatccaagcagatgggcaaccgcgagtatacggagctgaccttg
gaggggcgcatcattatggatgcgatggtggtgatccagcgcgactacaagctgcgctcc
tactcactcaactcggtatcacagaactttctcggggagcagaaggaggatgtgcaccac
tccatcatctcagatctccagcacggcgacgaggagacgcgccgtcgcctcgctgtgtac
tgcctgaaggatgcgttccttcctgtgaagctgctggatcggctcatgtgcatcgtgaac
aacgtggagatggcacgcgtaacgggtgtgccggtggggtggctgctggagcgtggccag
caaatcaaggttttctccatgctcctgcgcaaggcccagaagaagaagctggtggtgccg
acggtcgagtacacaggcggcagcgatcgcggctacgaaggcgccaccgtcatcgacccg
atcaaaggcttctacaactgccccgtcgcaacgctcgacttcgcgtcgctgtatccgtcc
atcataatcgcacacaacctgtgttactcaacattggtgcgcccggcggacgcgaggctg
tacccggaagactccctcgatcgatcgcccacgtcggacatctttgtgaaaaaagaggtc
ttcccaggcattcttcccgaagtgctacaagacttgctggctgcccgaaagcatgcgcgg
gcgatgatgaaggatgtgcccatgaactcgcttgagtacaaggtcctgaacgggcgccag
cttgcgctgaaggttagcgccaactctgtgtacggcttcacgggtgctcaggtgggcaag
ttgccgtgcctggagatcagcgcctccgtcacggcgtatggccggcagatgattgacagg
acgaagaacctcgttgaggagctataccccggcgcgcgtgtgctgtacggcgatactgac
tctgtgatggtgaagtgtgtcaccaacgagaaggcgagcgacaaggagcgcttgcaggcg
gccatggatttcggcatcgaggcggcggagaaggtgtccagcaatttcctcaaccccatc
aagctcgaatttgagaaggtgtactttccgtacctactcatgaacaagaaacgttacgcc
ggcttgctgtggacgaacacggatcgattcgacaagctggatgccaagggtatcgagact
gtacgccgagacaactgccctctagtcgcacgcatggtgtccggcgtgctgaaccgcatt
ctcattcaccgctccgtcgagagcgctgtcgagtttgtgaaaggcacgatcagcgacctg
ctgctaaaccgactcgacatatcgaacttggtgatcaccaaggctttctccaaggcagag
gatgagtatgccggtgcccaggcacacatcgccctggtggagcgcatgcggcagcgagac
cccgcctcagcgccgactattggcgaccgtgtggcgtacgttattattaaggcagcgaaa
ggtgccaaggcgtacgagcgaagcgaggaccccatctacgtgctcgacaacaatatccca
atcgacacacagtactatctcgagcatcagctggctccgccgattctgcgcgtgttcgaa
ggtgtactggacgaccccagtgtgctcatcaaaggagaccacacacgccacatcgccatc
tccgccccgagcaagaatgccggcgggttgatgaggtttgtgaagattcagctgcagtgc
atctcgtgccgcgccgtcatcaaagcaggcgccttgtgcgacaactgccaagacaaggca
cctgaggtgtatggcaagattgtagcgaagcgcaaccattacgaagcaatttactcgcag
gtgtggacgcagtgccagcagtgtcaggggtcgctgaatcaagaggtgatctgctctagc
cgcgactgtccggtgttctacatgcgcaagaaggtgcagaaggatctgcacgaacagcag
gtgctcctggatcgttttggtgttgtggacgactggtaa
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