Leishmania mexicana: LMXM_33_0360
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Entry
LMXM_33_0360 CDS
T02288
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit, putative
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMXM_33_0360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmi03021
]
LMXM_33_0360
Enzymes [BR:
lmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMXM_33_0360
Transcription machinery [BR:
lmi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
LMXM_33_0360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
13452228
NCBI-ProteinID:
XP_003878621
UniProt:
E9B4K4
LinkDB
All DBs
Position
33:124460..129229
Genome browser
AA seq
1589 aa
AA seq
DB search
MSQAATTAAQFVRPLLDKPVEVTSIKYSLLSEDMIHRLSVLPCHRVIGTEKSFGVNDGRL
GPSDRLSVCNTCGQRSIECTGHAGHIDLEAPVFHLGYFSAVIRVCRTICKRCSNVLLTRE
EMEYYLHRLRSTTHEPQQRAAIIKGIQEDAYKTRVCLMCGGLNGTVRRVRPMRIVHEKYL
VDLRRGEQANEDPTAFFQEELRSAAMQNSEVGAHKEFVHEFLHPQRVKELFEAIPLEQVP
LLGLQPGTSPCSLLISTLLVPPVCVRPRGMSTTSHIREDDLTTQYNEILICSDMMSDGTN
DAARSVETWELLQTRVARLLDAALPGFPSHLRTVECKSYAQRMKGKQGRFRGNLSGKRVD
FSGRSVISPDPNLRIDELAVPLRVARVLTYPQRVFAGNIQLMRRLVRNGPHVHPGALTVY
LSKECSRKSLRNARDREAIAARLSIGDVVERHVMNGDYILFNRQPSLHRISLMAHRARVL
PFRTFRFNECCCAPYNADFDGDEMNIHVVQTEEARAEAKELMLTSHNIITAKNGEPIIAC
TQDFLTAAYLVTARDALFDRASFTQMVSHWLGSETQYALPIPAILKPAELWSGKQLFELI
LRPTSETQLLLNLEAKARFYSGAGRHDDPAEGYVAFLDSVFLSGRLDKKLLGGGAKDGLF
ARLYALGGGEQTATCMSRIAQFTARYLQNYGFSLGLGDVSPTSSLNEKKAAVLAVSFDKC
DHLISLAKTGRLIPKPGLSVKQSLEAMLNAELSQVRDACGSAAVQALDAKSNAPLIMVNS
GSKGSALNTAQMMACVGQQTVSGKRIMNAFQDRALPHFPRFAEDPASRGFVASSFYSGLS
PTEFFFHGMAGREGIVDTAVKTAETGYIYRRLSKAMENLSIGYDASVRSVQGSIVQLRYG
EDGMDPWLMEGAHGTPLNLDQEWLSSRAAYARFRKQIASVFSERQGSGGLAASADPLLQT
YHRLYDEWHAVSMLPDELDTFVHHLLHAEEASVASCARLMEAEAAIRGAVPSSATAGLQL
LKQLAQQHGSDRLRSDIQAFLRKKRDELVQLRQKLKLPLDAHAPAAAAPAAASAKAVRSG
EKRKSSPHDDVLPSVTADASASAAAVQAFAESLQAELLPLTKGMLLHFLEASARKVHRKL
CEPGTPCGAIAAQSVGEPSTQMTLRTFHFAGVASMSITQGVPRLVEIINANKSIATPVIT
APIVLEDEFTSIDLASATRTQHQAARAVKGLMERVLLKEITREMVEVVTPRTYYIHIFLN
MELIERLLLPIDATVVCQRLYAAAARPMSPLRHLSEACVDVVSRDSLVVKSYEKDPARVH
FNVQHLLTLLPDLVVGGVPGVNRVMIADRSEKLLAEGAELLSVMSLPYVDGVRTTCNHVA
VIERALGIEAARETIVKETTSILQAYSLNIDIRHIYLLADVMTSRGVVLGITRYGIQKMN
NNVLTMASFERTTEHLYNAAMTEREDVNLSVSESIIIGKPIPLGTSSFSILLDKGSIAPP
GSNTGRMPSPQRSANAAATATAALKSSGKAAAAKDSKKVEPTPKEVFLRNSFMAHAAAHG
AATHRGLRGCFSSRSLSAEGVFRLDLFAL
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggctgctaccacggctgcgcagtttgtgcggccgctgcttgataagccggtg
gaggtgacctcgatcaagtacagtctcctctccgaggacatgattcaccgcctctcggtc
ctgccctgccaccgcgtgattgggaccgaaaagagcttcggcgtcaacgatggccgcctt
ggcccgagtgaccgcttgtcggtgtgcaacacctgcggtcagcgcagcatcgagtgcact
ggccacgccggccacatcgacctcgaggcgcccgtcttccacctcggctacttctctgca
gtcattcgagtctgccgcacaatctgcaagcgctgctccaacgtactcctcacgcgagag
gagatggagtactacctgcaccggctgagatccacgacacatgagccgcagcagcgcgcc
gccattatcaagggcatccaggaggacgcctacaagacacgcgtgtgcctcatgtgcggt
gggctgaacggcacggtgcggcgggtgcggccaatgcgcatcgtccacgaaaagtacctc
gtcgatctgcgccgcggcgagcaggcgaatgaggacccgacggcgttcttccaggaggag
ctgcggtccgctgcgatgcagaactcggaggtgggcgcccacaaggagttcgtacacgag
ttcctgcacccgcagcgtgtgaaggaacttttcgaagcgattccgctggagcaggtgccg
ctgctaggcctgcaacctggcaccagtccatgcagcctcctcatcagcaccttgctcgtc
ccaccagtgtgcgtgcggccgcgcggcatgtcgacgacgagccacatccgcgaggatgac
ttgacgacgcagtacaatgagattctcatctgctctgacatgatgagcgacggcacaaac
gatgccgcgcgcagcgtagagacgtgggagctgctgcagacgcgtgtggcgcgactgctg
gatgcggcgctgccggggtttccttcgcacctgcgcaccgtcgagtgcaagtcgtacgcg
cagcgcatgaaaggcaagcagggccgtttccgaggcaacctcagcggcaaacgcgtcgac
ttctctggacggtctgtcatttcacccgacccgaatcttcgcatcgacgagctcgccgtg
ccgctgcgcgtcgcgcgtgtgctgacgtacccgcagcgcgtctttgctggcaacatccag
ctcatgcgccgactcgtgcgcaacggcccgcatgtgcacccgggcgccctcaccgtttac
ctctcgaaggagtgctcgcgcaagtcgctgcgcaacgcccgtgaccgcgaggccatcgcg
gcgcgcctcagtataggcgacgtcgtggagcggcatgtgatgaacggcgactatatcctc
ttcaaccgccagccgtcgctccaccgcatctcgctcatggcgcaccgcgcacgcgtgctg
cccttccgcacatttcgcttcaatgagtgctgctgcgcgccgtacaacgccgacttcgac
ggagacgagatgaacatccacgttgtgcagacggaggaggcccgcgcagaagcgaaggaa
ctgatgctgacgtcgcacaacatcatcaccgccaaaaacggtgagcccatcatcgcatgc
acgcaggactttctgaccgccgcctacctggtgaccgcccgtgacgcccttttcgaccgt
gcctcctttacgcagatggtgtcccactggcttggcagcgagacacagtacgcgctgccg
attccagccatcctgaagccggcagagctgtggagcggcaagcagctcttcgagctcatc
cttcggccgacgtcagagacgcagctgctgctgaacttggaggcgaaggctcgcttctac
tctggcgctggccggcacgacgacccggcggaggggtatgtggcgttcctcgactccgtc
tttctctctggtcgactcgacaagaagctgctcggtggcggcgccaaggacggactcttt
gcccgcctctacgccctgggcggaggggagcagacggcgacgtgcatgtcgcgcatcgcg
cagttcaccgcccgctaccttcagaactacggcttctcccttggtctcggtgatgtgtcc
ccaacgtcgtcgctcaacgagaagaaggccgccgttctggccgtgtccttcgataagtgc
gatcatctcatctctctcgccaagacgggccggctcatccccaagcctgggttgagcgtg
aagcagagcctggaggcgatgctgaacgcggagctgtcgcaggtgcgtgacgcgtgcgga
tcggctgccgtgcaagcgctggatgccaagtcgaacgcaccccttatcatggtgaactct
ggtagcaaaggcagcgccctcaacaccgcacagatgatggcgtgcgtggggcagcagacg
gtcagtggtaaacgcatcatgaatgctttccaggaccgcgccctgccgcacttcccgcgc
ttcgccgaagaccccgcgtcgcgcggcttcgtggccagctccttctactctggcctatcg
ccgacggagttcttcttccatggcatggccggccgcgagggtattgtcgatacagccgtc
aagaccgcagagaccggctacatctaccgccgcctcagcaaggccatggagaacctgagc
attggctacgacgcctcggtgcgtagcgtgcagggaagcattgtgcagctgcggtacggc
gaggatggcatggacccgtggctgatggagggagcgcacggcacgccacttaacctcgat
caggagtggcttagctcccgggccgcctacgcccgctttcgaaagcaaatcgccagtgtc
ttcagtgagaggcagggcagtggagggctcgccgcatcagcggatccgctcctccaaacg
taccacaggctctacgatgaatggcacgccgtgtccatgctccctgacgagctggacacg
tttgtgcatcatctgctgcacgcggaggaggcgagtgtcgcctcctgcgcgcgcctgatg
gaggcggaggcggcgatacgcggcgcggtcccgtcgtctgcgaccgccggtctgcagttg
ttaaagcagctcgcgcagcagcacggcagcgaccgcctgcgcagcgacattcaagcgttc
ttgcgcaagaagcgcgacgagctggtgcagctgcggcagaagctgaagctacccctggac
gcccatgcccctgcggctgctgcgcccgcagcggcgagcgccaaggcagttcgcagcgga
gaaaagcgcaagtcaagcccacacgacgacgtgctgccatccgtcacagccgatgcgtcg
gccagcgcagctgcagtgcaggcgtttgcagagtcgctgcaagccgagctgctgccactc
accaaagggatgctgcttcacttcctggaggcttcagcgcgcaaggtgcaccgcaagctg
tgcgagcccggcacgccgtgcggcgccatcgccgctcagtctgtcggcgagccgagcaca
cagatgacgctccgcacgttccacttcgcaggtgtggccagcatgagcatcacgcagggt
gtgccgcgcctcgtcgaaatcatcaatgccaacaagagcatcgccactccggtcattacg
gctcccattgtgttggaggacgaattcacgtcgatagacctcgcgtcggcgacccgtacg
cagcaccaagccgcgcgtgcggtgaagggcctgatggaacgggtgctgctgaaggagatc
acacgcgaaatggtggaggtcgtgacgccgcggacgtattacattcacatcttcctcaac
atggagctcatcgagcgcctcctgctgcctatcgatgcgacggtggtgtgccaacggctc
tacgcggcggccgcgcggccaatgtcgccgctgcgccatctctccgaggcgtgtgtcgac
gtcgtgagccgcgactccctggtcgtcaagtcctacgagaaggacccggcgcgggtgcac
tttaacgttcagcacctcctcaccctcctgcctgatctcgtggtcggtggcgtcccaggc
gtcaaccgagtcatgattgccgaccgctcggagaagctgctggcggagggagcggagctg
ttgtcggtcatgtcgctgccgtacgtggatggtgtgcgcaccacgtgcaaccacgtcgcc
gtcatagagcgcgcgctcgggatcgaggctgcccgcgagaccatcgtgaaggaaactacg
agcatcttgcaagcctattcgctcaacatcgacatccggcacatctacctcctggccgac
gtgatgacgagtcgtggcgtggtcctcggcatcactcgatacggcatccaaaagatgaac
aataacgtcctcaccatggcgtccttcgagcgcaccacggagcacttgtacaatgcggcg
atgacggagagggaggatgtcaacctcagcgtctccgaaagcatcatcattggcaagccg
atccccctcggcaccagcagctttagcatcctgctcgacaagggcagcattgcgcctccc
ggctccaacacgggccgaatgccgtcgccacagcgcagcgctaacgcagcagcaacagca
accgcagccttgaagtcgtccggcaaggctgcggcggccaaggacagcaagaaggtagag
ccgacgccgaaggaggtgtttctgcgcaactctttcatggcgcacgccgccgcgcacggg
gcggcgacgcatcgaggcctgcgtggctgcttttcgagtcggtcgctctccgccgagggc
gtcttccggttggacctcttcgcgttgtaa
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integrated database retrieval system
