Leishmania mexicana: LMXM_33_2260
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Entry
LMXM_33_2260 CDS
T02288
Name
(RefSeq) ATP-dependent RNA helicase-like protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMXM_33_2260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmi03041
]
LMXM_33_2260
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_33_2260
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LMXM_33_2260
Spliceosome [BR:
lmi03041
]
Complex A
U2 snRNP components
U2 related factors
LMXM_33_2260
Complex B
LMXM_33_2260
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
LMXM_33_2260
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
90S particles
Helicases
LMXM_33_2260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
HA2_C
AAA_22
AAA_19
HA2_N
SRP54
AAA_7
AAA_30
AAA_16
Cas3-like_C_2
ResIII
ABC_tran
nSTAND3
AAA
TilS
AAA_25
AAA_29
Flavi_DEAD
NACHT
Helicase_RecD
T2SSE
TrwB_AAD_bind
ATPase
Motif
Other DBs
NCBI-GeneID:
13452386
NCBI-ProteinID:
XP_003878779
UniProt:
E9B512
LinkDB
All DBs
Position
33:complement(826923..829352)
Genome browser
AA seq
809 aa
AA seq
DB search
MLSRVKKTPMLLHPALRRLALLFFLYCHASGTLHTAHLMALKRVREEAAENGEVGLGDTL
VSQLPKKRPDVAVCTSSSALSPFTQQPFSARYRQLLQSRQRLPVYEKRHLIQETVRTNAV
TLLVGETGSGKTTQVPHFLAELQDTFTGVIACTQPRRIAAISVATRVAEEMDVPLGAQVG
YHVRFDSRQCDATRVLYMTDGMLLREAFTDADLKKYSVVVVDEAHERTIDTDVVLGLLKR
LLTRRPRFRLVVMSATLDVAKIQSYFPGSPLVHVSGRMHDVDVFYMPQPVRDYVEATVSC
VLQLHKREPAGDILCFLTGEAEIERAVAALHQALDSSSAAAFKEQEASVQGPGTGLTLLK
TSADDLARPARPTEVVVLPLYGSLSLQEQQKVFAAYPPNTRKVVVATNIAETSVTIDGIV
YVVDCGYQKQSLYNSEARVDYLLPAVISKASAEQRKGRAGRTRPGKCFRLYTSADFATFP
DQTHPEILRTNIVNTVLLLLTLGVANPCEFPFIDPPSDQGMSDAFYQLLYFGAVDDGLQL
TDFGRRMAVFPVDVCLARMLLMASKHGCGADAAVVAAMLEAGNAFSRPPSRLAEAREAHA
RFDDADGDHVALFRVFHAYFKNQQNGKRFCYENYLRHQTLQQAVQVYNQLRRLMGQLTIP
VQSTYIPEREYVDTVALRKAVLEGFFTQVAFLTPVTPITHRAGADPTTRVYRTVRDALNV
TLHRQSVLAATHKSRALPTWIVFDRLEVQGDSGTFIRTASAVEVGWLLDVSDFYTDLSEI
PDGEIAQVLRRAHEAESSAHPCKVKRESV
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgcgggtaaaaaaaactcccatgctcttgcaccccgccctccgtcgtcttgcg
ttgcttttctttttgtattgccacgcatctggtacactgcatacagcgcacctcatggcc
ctcaagcgcgtgcgcgaggaagctgccgagaacggcgaggtcggcctcggcgacacactc
gtctcccaactcccgaagaagcgtcctgacgtggctgtctgcacctccagctccgcattg
agtcctttcacgcagcaacccttctcagcccgctaccgtcagctgttgcagtcgcgtcag
cgactgcctgtgtacgagaagcgccaccttatacaggagacagtgcgaaccaacgctgtc
acgttgctcgtgggcgagacgggcagcggcaagacgacgcaggttcctcactttcttgcg
gagctgcaggacaccttcaccggcgtcatcgcatgtacgcagccgcgtcgtatcgctgcc
atctccgttgccacgcgtgtggccgaagagatggacgtgcccctcggtgcgcaagtcggc
tatcacgtccgctttgactcgcgccagtgcgacgccacgcgagtgctgtacatgacggat
ggcatgctgcttcgtgaagcgttcacggatgcggacctcaagaaatacagtgtcgtggtg
gtggacgaggcgcacgagcggacgattgacacggatgtggttctcggcctgctgaagcgg
ctcctcacacggcgtccgcgtttccggctggtggtcatgtcggccacgctggatgtggca
aagattcagtcctacttccctggttcgcctctcgtgcacgtctcggggcgcatgcatgac
gtggacgtcttctacatgccacagccggtacgcgattacgtggaggcgaccgtgtcgtgc
gtgcttcagctgcataaacgtgagcccgccggggatattctctgcttcttgactggcgag
gcggagattgagcgggcggtcgcggcacttcaccaggccctcgactcgagctctgcagcc
gccttcaaggagcaagaagcgtcggtgcagggacccggaacgggcttgacgcttctcaag
acgtcggcggacgacctggcgcggccggcgcggccgacggaggtggtggtgctgcctctc
tacggctctcttagcctccaggagcagcagaaggtgtttgctgcctatccccccaacacg
cgcaaggttgtcgtggccacgaacattgctgagacgtccgtcacaattgacggcatcgtc
tacgttgtggactgtgggtatcagaagcagagcttgtacaactccgaggcgcgcgtggac
tacttgctgccggcggttattagcaaggcctccgcagaacagcgcaagggccgcgctggc
cgtacgcggcctgggaagtgcttccgcctctacacgtcggccgactttgccacctttccc
gatcaaacgcacccggagatactacgcacgaacattgtgaacactgtgttgctgctgctc
actcttggtgtcgctaacccgtgcgagttccccttcatcgacccgccctcggatcagggc
atgagcgacgcattctaccagctcttgtacttcggcgccgtggatgacgggttgcagctc
acagactttgggcgacgcatggcagtgttccccgtggatgtctgcttggcacgaatgctg
ctcatggcatccaagcacgggtgcggtgccgacgccgcggtggtggcggcgatgctggag
gctggaaacgcgttcagccgtccaccatcgcggttggccgaggctcgcgaggcgcacgcg
cgcttcgacgatgccgacggcgaccacgttgcgctctttcgcgtctttcacgcgtacttc
aagaatcagcagaacggtaagcgcttctgctacgagaactacctacgacaccagaccctg
cagcaggcggtgcaggtgtacaaccagctgcggcggttaatgggccaacttacgatacca
gtgcagtccacctacatcccggagcgcgagtacgtggacacggtggcgctccgcaaggcg
gtgctggagggattcttcacacaggtcgccttcttgactcccgtgacacccatcactcat
agagccggagcggacccgacgacgcgagtctaccgcactgtccgggacgccttgaatgtg
acgctgcatcgtcagtccgtgctggcggcgacgcacaagtcacgcgcgcttccgacctgg
attgtgtttgaccgtctggaggtgcaaggggactccgggacgtttatccgaaccgcctca
gcagtggaggtgggctggctgctggacgtcagtgacttctacacggacctcagcgaaatc
ccagacggcgagattgcgcaggtgctgcgccgtgctcatgaggcggaaagtagcgcacac
ccgtgcaaagtcaagcgcgagagtgtgtag
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