Leishmania mexicana: LMXM_33_3430
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Entry
LMXM_33_3430 CDS
T02288
Name
(RefSeq) cleavage and polyadenylation specificity factor,putative
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
lmi
Leishmania mexicana
Pathway
lmi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LMXM_33_3430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmi03021
]
LMXM_33_3430
03019 Messenger RNA biogenesis [BR:
lmi03019
]
LMXM_33_3430
Transcription machinery [BR:
lmi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
LMXM_33_3430
Messenger RNA biogenesis [BR:
lmi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
LMXM_33_3430
U7-dependent histone pre-mRNA processing factors
LMXM_33_3430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B
Lactamase_B_6
Anti-Pycsar_Apyc1
RMMBL
CPSF73-100_C
Lactamase_B_2
Lactamase_B_3
DUF8772
Motif
Other DBs
NCBI-GeneID:
13452507
NCBI-ProteinID:
XP_003878899
UniProt:
E9B5D2
LinkDB
All DBs
Position
33:<1307571..>1309841
Genome browser
AA seq
756 aa
AA seq
DB search
MAAPFLPEAESSAAPAALRSNAPDEVEVLPIGSGGEVGRSCVVVRYKGRGVMLDCGNHPA
KSGLDSLPFFDSIKCDEIDVVLITHFHLDHCGALPYFCNQTSFKGRIFMTSATKAFYKMV
MNDFLRIGAGASDLVTSEWLQSTIDRIETVEYHEEVTVNGISFQPFNAGHVLGAAMFMVD
IAGMRALYTGDFSRVPDRHLLGAEVPPYSPDILIAESTNGIRELESREEREQLFTGSVHE
VVRRGGRCLVPVFALGRAQELLLILEEFWDAHKELQNIPIYYASSLAQRCMKLYQTFVSA
MNDRVKQQHANHHNPFVFKYIHSLMDTKSFEDNGPCVVLASPGMLQSGISLELFERWCGD
RRNGIIMAGYCVDGTIAKDVLAKPKEVTKPDGKVLPLRMSTIEAVSFSAHSDGRQTRDFI
QNLTKVKHTILVHGNPGAMGQLKNKLLQDFRDRNMSVYTTMNQESIRIPFVQERTAKVMG
KLANMSLQEGEFVSGVMLVSGQHQYSIVHPDDVPVFTDLSVNRIQQAMVLPLPRHRSPLE
VLQVLQRYFAQSKLFEEVVPRQSSHEEAAEAHQAAAERGEARDPDSTLLFVSKDVTVDVQ
KSSQAQTTLTITWYSSHYNDLLADVTCIALAKLAEEPHEAEGEDVLVPADVSGQDRIFRV
KCFHYMISQFYPSVKTNLSSGSCSVSLADGQVANIVDCIEVYLERSAGKKDVDYDAPEVQ
KLKQILKRIYLTLFPIPADNGWCDCGMIHGEEPVAE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgtttctgcccgaggcggagagctccgctgcgccagcggccctccgctcc
aacgcaccggacgaggtggaggtgctgcctattggcagtggtggcgaggtgggccgctcg
tgtgtcgtggtgcgatacaagggccgcggcgtcatgcttgactgcggcaaccacccggcc
aaaagtggtcttgactccctgcccttctttgacagcatcaagtgcgacgagatcgatgtg
gtgctcatcacgcacttccacctagaccactgcggagcactgccgtacttctgcaatcag
acgtccttcaagggccgcatcttcatgaccagcgccaccaaggccttctacaagatggtc
atgaacgacttcctgcgcatcggcgccggggccagcgaccttgtcacgagcgagtggctg
cagagcacgatcgatcgcattgagaccgtcgagtaccacgaagaagtcaccgtgaacggc
atctccttccagccgttcaacgccggccacgtgcttggggcagccatgttcatggtcgac
atcgccggcatgcgtgccctgtacacaggcgacttttcccgagtgccggaccgccacctg
ctgggggcagaggtgccgccgtactcaccagacattctgattgcggagagtacaaacggc
atccgcgagctcgagtcccgcgaggagcgcgagcaactcttcacgggcagtgtacacgaa
gtcgtacgccgcggcggtcggtgtctggtgcccgtctttgccctaggccgcgcgcaggag
ctgctcctcattctcgaggagttctgggatgcgcataaggagctgcagaacatccccatc
tactacgcctcatcgctggcccagcgatgcatgaaactctaccaaaccttcgtcagcgcc
atgaacgatcgtgtgaagcagcaacatgccaatcaccacaaccccttcgtcttcaagtac
atccactcgctcatggacacaaagtccttcgaggacaacggcccctgcgtggtgctggcc
tcccccggtatgcttcagtcgggcatctcgctggagttgtttgagcgttggtgcggcgac
cggcgcaacggcatcatcatggccggctactgcgttgacggcaccattgcaaaggatgtg
ctcgcgaagccgaaggaggtgacgaagccggacggcaaagtgctaccgttgcgcatgagc
accatcgaggccgtctccttctccgcccactcggacggtcggcagacgcgcgacttcatt
caaaaccttaccaaggtgaagcacacaatccttgtgcacggcaacccgggtgccatgggg
cagctcaagaacaagctccttcaggacttccgggaccgcaacatgtccgtctacacgacc
atgaaccaagagtcgatccgtattccgttcgtgcaggagcgcaccgcgaaggtgatgggc
aagctggcgaacatgagcctgcaggagggcgagtttgtgagcggcgtgatgctcgtgtcc
ggtcagcaccagtacagcatcgtccaccccgacgacgtcccggtgttcaccgatttgagc
gtgaaccgcattcagcaggccatggtccttcctctgccgcgtcaccgctcgccgctggag
gtattgcaggtgctccagcggtactttgcgcagagcaaactgttcgaggaggtggtgccg
cgccagtccagccacgaggaagcggcagaggcccatcaggccgccgcggagcgcggtgag
gctcgcgaccccgactcgacgctgctgttcgtctccaaagatgtcaccgtcgatgtgcag
aagagctcgcaggcgcagacgacgctcaccatcacgtggtacagcagccactacaacgac
ctcctcgctgatgtcacgtgcatcgcactcgccaagcttgccgaggagccgcatgaggcg
gagggtgaggacgtgcttgtgcctgccgacgtctccggtcaggaccgtatcttccgtgtc
aagtgcttccactacatgatctcgcagttctatccgtccgtcaagacgaacttgtcgtcg
ggtagctgcagcgtcagccttgcagatggccaggtagcaaacatcgtggactgcatcgag
gtctacttggagcgcagtgctggcaagaaggacgtcgactacgacgcgccagaggttcag
aagctgaagcagattctgaagcgcatctacctgaccctgttccccattccagcggacaac
ggctggtgcgactgcggcatgattcacggcgaagaacccgtggcggagtaa
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integrated database retrieval system
