Leishmania mexicana: LMXM_34_2450
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Entry
LMXM_34_2450 CDS
T02288
Name
(RefSeq) hypothetical protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lmi
Leishmania mexicana
Pathway
lmi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
LMXM_34_2450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmi04121
]
LMXM_34_2450
Enzymes [BR:
lmi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
LMXM_34_2450
Ubiquitin system [BR:
lmi04121
]
Ubiquitin ligases (E3)
HECT type E3
LMXM_34_2450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
C1_1
Motif
Other DBs
NCBI-GeneID:
13450960
NCBI-ProteinID:
XP_003879242
UniProt:
E9B6C5
LinkDB
All DBs
Position
34:<937723..>944643
Genome browser
AA seq
2306 aa
AA seq
DB search
MDVGVYDPKAQVKAVAAELKAVNTTRLLEAVDVMSTSLVMGLEGYLRKFDSATAIPLLAD
VCETFIREAAQGDLLVMALRALSLIMEHVPSSYEAAQGFHVSLMQLASQAIHRALCAEWK
FVLSNNALMIEEGLRVMRFVSKDDMTGEIIHHAFVGDLLTLCTDPHPLVARQALETLLMM
SSKVVMPSELEKRTHSFAAGIFSFFKSKKKSSRTGSDTGKAGHRSGSSGSSSTKAAATED
IVPYADHPTVSQVENVILPLLVSLIEHYAKSFTSIPEHWTLLELSLQCLGTLIERALICH
RPHTARALASALLPKILFQLILDTESNVTLEPSVRVDRVLLCETTLTLLTYCHRYLVLES
LQLPEARRFFRLILEDSTEEITSFLDDPFPRAVIATRSTQRRDKDHITSIAALQLFVLAC
PTVPPNAFGMKPKLVLPVHQWMWEDELRHNNRLMEEQCLSLERNWTRLDHHARISVHLKQ
LNVNLHTMTMSKAASGGHRNISRAYVPFVYHFADEATLRPIVAVKEAGPCAEDGTMLAWK
PTASTTHSSKTTASGLIAKQVDDNASGSSSAKRSRRKCLSTSSLSEGEVMNTRASVPLTV
VLNTQVEVPEDHISLAEEYFDFLCVFAKNTSGQMAKQVATCACASMLQLMFLSGASARFV
GLMSTAVLPMCEMCREALISADKATKAVVLTMIEWMLFHPMAEPCQFTESALRCGLLNQL
DILSKTTLLVHDKPTRTATLVEKAKALVGCILEKIENHRAAHTGGAGINADRGSKTTLGG
GFLSTTMRRVQTVLDELRLCHCGAIKATVVDTSSSTRTAIAADKNRNPTRTIKGRVDTHE
SAIRELLRIFHESIDITPFEVFTADVASTLLYYLLGDRTLEDMLGDTLVFASGASASTSR
RETVGLPELHTGPIDRDTSSWTAMMASGMHVADILAMYVVEKRLRCFIQCAVAYPIGMRR
LVHTLTANLSLQSYLPLVESVVTYDKVVCKTPLQAYHALSVISPLIALCGDAGRRISAAI
KTSTDDDAMLPPRTSSSATVSGDSPALAASSSNGTGTKQRKTNLLASSFARSRAGSSRAN
DSAKAAHVAKECCMAGHRLHDMEHYPQLRRCDKCNRTISSGRSCNTCNYEVCENCYAGYT
GNLELVRSLSTMERNRVHLCATIGDLERWFRTGSTSTKGTESAPTSQSSLHHLERFTTRV
LTFLKRYTAVDSSAVSIIPYASGATASNFLAYANPAARSNLPVELAEKLLSHPSVVRRLT
YKYLSRFSTRGALMDEGTPIAPEIAASLDFEVQTVLGTAAERQAAESMVQEAVEERYILY
RTSCGMLPFQETVLSTLYRRAFALGDRQVLLQLENCLLRADNAVDEPLTLQANSSVTVAN
PAALSSRFSANVKGTKKAKSLKSPLAVAAACSSSSAASTAAAEPVMTSVEKSAEAREFDG
HRVGLDQTYLFHHFESDSATHCACGAHSRAEFHTEEPPALTFTAPAFAHRADMLLLIILH
RALFEETHGLIAYAREATVIFGMDDSIFQNNTIITALVRSLEASALRVSLLPPRYALPRW
VNFLLREGRFLIPLPVRERASRFLAYGARRAFIQHMRVFRSQRNDRALLIVPGEWAKLSN
HKFAVSRDAFACDAYAILRKCCDARFPISFEFKGDVGVGQGPTAQFYTLLAAEASKCSTK
LWRDSDDKANGSSSNTAAVSNSSTGIVMAAGPLIVGPPPKSLPPRRSSITPITSPARFGT
PRPGSFTNGAGGTVSTPRLGSIPTQSSLRNFVRADSAHLTIPSATLSPSLSITTAAEADA
VLVPPPEGFYPRHMDGVRRYLEDIDSFPATPLLGCSHSHAMHDDSAAHALSQSASEYFGS
TATRKGSAVTDVSTAGAGGHGTNSNSRTASAVQYDLSKAAFLVDTNVGLMRDYVLEQRER
AKAYYVIGAALGRAFVDEQVFPLPLSRAVAYFIRRGVPAYQCVVSDVTYIDPPPEFPIDL
FELPLTAASWVDQGIAESLACLSTMDSSTLSALDLRFTLPGDDSFELCPGGAQITVTKKN
LRLYQRRVVGALLYESVAVPLYFLTMGCQDVVPHEALTVMDVKELIGVLCGEDKNPSDPL
WTTEEIRSVLVGDHGYRNDSPQLELLAKVLGQRLTPAEQREFLLFCTGCPRLPIGGIRAL
GAITVVRRSNAFEDERTEALQGEVAAATTSSSGGGGTVDMGEEDDGGGGLMGSLYDHTAQ
SDVEDSPSGQGEAPRRIFSSVYPTASEEPGGLSSSFALHLPESEWALPSVNTCFRYLKLP
PYPSEELLYKKLMMSIMESGSSFELS
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcggcgtctatgatccaaaggcgcaggtgaaggccgtggcggcggagttgaaa
gcagtgaacaccacccggctcctcgaggcagtcgatgtgatgtccacctccctagtaatg
ggcttagagggatatttacgcaaattcgactctgcaaccgccatcccactccttgccgac
gtgtgcgagacgttcattagggaggctgcgcagggcgacctcctcgtcatggcactgcgt
gccctttccctcatcatggagcacgttccatcttcctacgaggcagcacagggattccac
gtctctctcatgcagctggcatcgcaggcgattcaccgcgcgctctgcgcggagtggaag
tttgtgctgtcgaacaacgccttgatgattgaggaaggtctgcgcgtcatgcggttcgtc
agcaaggacgacatgactggcgagataatccaccacgccttcgtcggcgacttgctcaca
ctgtgcacggacccacatccgctggtggcacggcaggcactggaaacgctgttgatgatg
agctccaaggtggtgatgccgtcagagctcgagaagcggacccattccttcgccgccggc
atcttttcattcttcaagtcaaagaagaagtcgtcgcgcaccggcagcgacactggcaag
gctggccataggtccggctctagcggaagctcgtcgacgaaggcggccgcgaccgaggac
attgtgccatacgcggatcaccccacagtgtcgcaggttgagaatgttatcctgcctctg
ctcgtgtccctgatagagcactacgccaagtcattcacgtcgattcctgagcactggacc
ctgctagagctgtcgctgcagtgtctcggcacgctcattgagcgagcgctgatttgccac
cgaccgcatacagcccgtgcgcttgcctcggccctgcttcccaagatcttgttccagctc
atcctcgacacggagtcgaacgtgactctggagcccagcgttcgcgtcgaccgcgtcctc
ctatgcgagacgaccttgacgctgttgacgtactgccaccgctacctggttctcgagagc
ctgcagctgccggaggcgcgccgcttcttccggctcatcctggaggactcgacagaggag
attaccagctttctcgatgaccctttcccgcgcgctgtcatcgccacccgcagcacgcag
cggcgcgacaaggatcacatcacctccattgctgccctgcagctcttcgtactagcctgc
ccgaccgtgcctccgaacgcctttggcatgaagcctaagttggtgctcccagtgcaccag
tggatgtgggaggatgaactgcgccacaacaaccgcctgatggaggagcagtgcttgtcc
ctcgagcggaactggacgcgacttgatcaccacgcccgcatctctgtccacttgaagcag
ctgaatgtgaacttgcacactatgacaatgtccaaggctgccagcggagggcaccgcaac
atcagccgcgcctacgtcccgtttgtgtatcacttcgcagacgaggcgacattgcggccc
atcgttgccgttaaggaggctgggccgtgcgcggaggacggcacaatgctcgcgtggaag
ccgactgcgtcgacgacgcacagcagcaaaacgacggccagtggtttgatagcaaaacaa
gtggacgacaacgcgagcggctcgagctcggcgaagcggagtcgccgcaaatgcctcagc
acatcttctttgtccgagggcgaagtcatgaacacgagagcctctgtgcccttgacggtg
gtgctgaacacgcaggtggaggttccagaggatcacatttcgctcgccgaggagtacttt
gactttctgtgcgtctttgcgaagaacacatcggggcagatggcgaagcaggtggccacg
tgtgcgtgcgcgtcgatgctgcaacttatgttcctgtctggtgcctcggcgcgctttgtg
gggctgatgagcacggcggtactgcccatgtgcgagatgtgccgcgaagcgctcatctcg
gcggacaaggccaccaaggcggttgttctgacgatgattgagtggatgctgttccacccg
atggcggagccgtgccagttcacagagagcgcactgcgctgcgggctgctgaaccagctg
gatatactgtccaagacgacgctgctggtgcacgacaaaccgacgcggacggcgacgctc
gtggagaaggcgaaggctctggtgggttgcattctggagaagatcgagaaccaccgtgcc
gcacacacgggtggggcgggcataaatgcggacagggggagtaaaactactctaggtggc
gggtttctgtcgacgacgatgcggcgtgtgcagacggtgctggacgagctccggctgtgc
cactgtggggccatcaaggccacagtggtcgacaccagcagcagcacgaggacggccata
gctgccgacaaaaacaggaaccctacgcggacgatcaagggacgcgttgatacacacgag
agcgcaattcgcgagctgctgcgcatcttccacgagtcgatcgacatcacccccttcgag
gtcttcaccgccgacgtggcatcaacgctgctgtactaccttctcggtgaccggacgctg
gaggacatgctgggtgacacattggtgtttgcctccggtgcctccgcctccacctcgagg
cgcgaaactgttgggcttccagagttgcacacgggaccgatcgaccgagacacgtcgtcg
tggacggccatgatggcaagcggtatgcatgtcgccgacatccttgccatgtacgtggtt
gaaaagcgcttgcggtgcttcatccagtgcgcggtggcgtaccctattggcatgcgccgg
cttgtgcacactctgacggcgaacctgtctttgcaaagctatctcccgcttgtcgagtcg
gtagtgacctacgacaaggtggtatgcaagacccctctacaggcatatcacgcgctaagc
gtaatctcgccattgatcgcactttgtggcgatgccggccggcgcatctccgccgcgatc
aagacctcgacagacgacgacgccatgctgccgcctcgtaccagctcctctgcaacggtg
tccggcgactccccggcgcttgctgcatcgtcctcaaacgggacggggacgaagcagcgc
aagacaaacttgctggcgtcctcctttgcacgtagccgggctgggtcgtcgcgggcgaac
gactcggccaaggccgctcacgtggcaaaggagtgctgtatggcgggccaccgcctgcac
gacatggagcactacccgcagctgcgccgatgcgataagtgcaaccgcactatctccagc
ggtcgaagctgcaacacgtgcaactacgaagtatgcgagaactgctacgcgggctacacg
ggtaatttggagttggttcggtcactttccacgatggagcggaaccgcgtacacctctgc
gccactatcggcgatctagagcggtggttccgcaccggctccacgtcaactaagggcact
gagtcggcccctacgtcacagtcgtcgcttcatcatctcgagcggttcacgacgcgtgtg
ctcaccttcttgaaacggtatacggcggtggactcgtctgcggtctcaatcatcccatac
gccagcggtgcaacagcgtcaaacttcctcgcttatgcgaacccggccgcacgcagcaat
cttcctgtggagcttgcggagaaactgctaagtcaccccagcgtcgtacggcgcttgacg
tacaagtacctctcgcggttttcgacgcgcggggcgctgatggacgaaggcacgccgata
gcgccggaaatcgcggcctcccttgatttcgaggtgcagacggtgctgggcaccgccgcg
gagaggcaggcagctgagagtatggtgcaggaggctgtggaggagcgctacatcttgtat
cgcacctcatgcggtatgcttccgttccaggagactgtgctgagcacgctttaccgacgc
gcctttgccctcggcgatcgtcaagtgctcctgcaactagagaactgtctgctgcgggct
gacaacgccgtggatgagccgctgacgctgcaggcgaacagctccgtgacagtcgcaaac
ccagctgccctgtccagtcgattcagcgctaacgtgaagggtaccaagaaggccaagtca
ctcaagtcaccgcttgcagtggccgcagcctgctcgtccagctccgcggcttcgaccgcg
gcagcggagccggtcatgacctccgtggagaagtccgcggaggcgcgcgagttcgatggc
caccgcgtcggactggaccagacctacctcttccaccacttcgagagtgactcggcgacg
cactgcgcgtgcggtgcgcactcccgcgcagagtttcacacggaggagccgccggcgctc
actttcacggcacccgcctttgcccaccgggccgatatgctgctgctcatcatccttcac
cgcgctctctttgaggagacccatgggctgatcgcctatgccagggaggcgacggttatt
tttggcatggatgacagcatcttccagaacaacacaatcatcaccgctctggtgcgctcg
ctggaagcgtcggcgctgcgcgtgagcttgctaccgccgcgctacgcgctgccgcggtgg
gtgaactttctgctgcgtgaggggcgcttcctcatcccgctgccggtgcgggagcgtgcg
tcgcgcttcttggcctacggtgcacgacgcgccttcatccagcacatgcgcgtcttccgt
agtcagcgcaacgacagggctctcttgattgtgccaggtgagtgggcgaagttgtcgaac
cacaagttcgccgtcagccgcgacgcgtttgcgtgtgatgcctacgcgatactgcgcaag
tgctgcgacgcgcggttccccatctcgttcgagttcaaaggcgacgtcggcgtcggccag
gggcccacggcgcagttctacactctgctggcggctgaggcgagcaagtgttctacgaag
ctatggcgcgatagcgacgacaaggctaacggcagcagcagcaacactgcagctgtgtcg
aattcgtccacagggatcgtgatggcagctggcccgctgatagttggtccgccaccgaaa
tcgctgccgccgcgccgcagcagcatcacccccataacctctccagctcgctttggcacc
ccccgccctggctccttcaccaacggtgccggcggcaccgtgagcacaccgcgcttgggc
tcgatccctacccagtcctccttgcgcaattttgtgcgcgcagactcggcgcatcttacg
atacccagcgcgaccctcagcccgagtctgtccataacgactgctgcggaggccgacgca
gttctcgttccacctccggaaggcttttatccgcgccacatggatggggtgcggcgctac
ctcgaagacatcgacagttttcccgcgacgcctctactgggttgcagccacagtcacgcc
atgcacgacgacagcgccgcccatgccttgagccaaagcgccagtgaatacttcggctcg
acggcgacccgaaaaggttccgccgtcaccgacgtctccactgcgggggctggtggccat
ggcacgaacagcaacagccgcactgcctctgcggtgcagtatgacctcagcaaggcggct
tttttggtggacacaaacgttggtttgatgagggactatgtcctggaacagcgggagcgc
gccaaggcctactacgtcatcggcgctgcactcggccgcgccttcgtcgatgagcaggtg
ttcccgcttccactgtcacgggcggtggcctacttcattcgtcgtggcgtgccggcctac
cagtgcgttgtctccgacgtgacgtacattgacccgccgccagagttcccgatcgacctg
ttcgagttaccgttgacagcggcaagctgggtggaccagggcatcgcagagagcttagca
tgcttgtctaccatggatagctccaccctctctgcgctcgacctgcgtttcaccctcccg
ggggacgacagcttcgagctttgccctggtggggcacagatcacggtgaccaaaaagaac
ctgcgcctgtatcagcgccgcgttgttggggcgctgctgtacgagtccgtggcggtgccg
ttgtacttcttgacaatgggctgccaggacgttgtgccgcacgaggcgctcacggtgatg
gacgtgaaggagctgattggcgtgctttgtggcgaggacaagaacccaagcgacccgctg
tggacgacggaagagattcgctctgtgctggtcggcgaccacggctaccggaacgactca
ccgcagctcgaattactggcgaaggtgcttggacagcggctgactccagcagagcagcgc
gaattcctgcttttctgcaccggttgcccccggctacctattggcggcatccgcgctcta
ggtgccatcacggtagtgaggcgctcaaacgcgtttgaggacgagcgcacggaggcgctg
cagggagaagtggcagcagcaacgacgagcagcagcggcggcggtggaacggtcgacatg
ggggaggaggacgacggtggcggcggcctgatggggagcttgtacgatcacaccgctcag
tcggatgtggaggactcgccgtctggccagggtgaggcaccgcgccgcatcttttcctcc
gtctaccctacggcgtcagaggagccaggtggcctgtcgtcaagctttgccctccactta
cctgagtctgagtgggctctgccatcggtgaatacatgctttcggtacttaaagctgccg
ccatacccaagtgaggagctgctgtacaagaagctaatgatgagcatcatggaatcgggc
agctcctttgagctttcgtag
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integrated database retrieval system
