Leishmania mexicana: LMXM_34_4030
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Entry
LMXM_34_4030 CDS
T02288
Name
(RefSeq) putative ATP-dependent RNA helicase
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_34_4030
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_34_4030
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LMXM_34_4030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-GeneID:
13451115
NCBI-ProteinID:
XP_003879398
UniProt:
E9B6T1
LinkDB
All DBs
Position
34:1509173..1511245
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AA seq
690 aa
AA seq
DB search
MKGAKLSEPTLAFLQDCMKFTTMAPVQARTIPLFLTNYDVVVEAITGSGKTLAYLIPCLE
MLLRPRCREVAKEYKNAVFAVLVLPSRELAQQVFHIVKRMLHFVTKSYKNGSPANGLPAY
SYQCYIGGRDIKHDVEEFSKQGGNVLVGTPGRLYELLVSSKYANLFHLSQFELLILDEAD
KLLEFGFRAKLDALLKRLPKQRRTGLFSATQTKELTELARAGMRNPVSVTVRINPLNSAN
SDSTKPQIPEQLSNFYAFTHASEKLDRLVEFLASHKDEKVLVYVMTCASVEWLYEALSAV
LWQDEADNVFALHGQMKLEKRQKVHRQVTRRSRCVLVCTDVAARGLDIPEVGLVVQYDPP
VDPNTFIHRIGRTARMGRSGKSVVFLMPQELEYINFMRLQNVPLQALDEERDSVDVAKDA
VRNMNARRTLLSSELPDKRKAIHQAHREKQLSRRERRQQLHEAHQAMVDGKSQRLAKRKE
VLGDMCTSPSILALRREECRNEKLLNLAARAFVSFLRAYKEHECRYIFQLQLIDLTDLTH
GFALFKIPNCGEIKRMRVLRIPLQDEFAPFVKQMATVLREKRQRAAEEQSAAAAVDGGGD
DSPDAKRHRTERNEKLEALKLLKMSKSERSRAWKQAELDELLKDSYYVKMERRGKVNRHV
VDEKMGVEAIENSFMSARERKEAQLARKAR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaagggggccaagcttagtgagccgaccctcgcgttcctccaggactgcatgaagttc
acgacaatggctcccgtccaggcccgcaccattccactcttcctcaccaactacgacgta
gttgtggaggccatcaccgggagcggcaagacgctcgcataccttatcccgtgcctggag
atgctgctgcgcccacggtgccgagaggtagcgaaggagtacaagaacgccgtctttgcc
gttctcgtgctgccatcgagggagttggcgcagcaggtgtttcatatcgtaaagcgcatg
ttgcactttgtgacgaaaagctacaaaaacggcagcccagcgaacggtctgcccgcctac
tcttaccagtgctacatcggcggacgcgacatcaagcacgacgtcgaggaattcagcaaa
cagggcggcaacgtactcgtcggcacaccgggccggctctacgagctgctcgtctcctcc
aagtacgcgaacctcttccacttgagtcagttcgagcttctcattctcgacgaggccgat
aaactgctcgagttcggcttccgggcaaagctggatgcgctgctgaagcggctgccgaag
cagcgccgcaccggtctgttcagtgcgacgcagacaaaagagctgacggagctggcgcgg
gctgggatgcgcaacccggtgtccgtcaccgtccgcatcaaccccctcaactccgccaac
agcgactctacaaagccgcagatacccgagcagctctctaacttctacgccttcacgcac
gcgtctgagaagctggaccgcctcgttgagttcctggcgtcgcacaaggatgagaaggtg
cttgtgtatgtcatgacgtgtgctagcgtggagtggctctacgaggcgctctcggcggtg
ctgtggcaggacgaggctgacaacgtcttcgccctccacggccaaatgaaattggagaag
cgtcagaaggtgcaccggcaagtgacgaggcgttcgcgatgcgtgctcgtgtgcaccgac
gtggcggcgcgcgggctggatatcccggaggtaggcctggtggtgcagtacgacccgccg
gtggaccccaacacgtttatccaccgcatcggccgcacggcgcgcatggggcgcagcggt
aagagtgtcgtctttctcatgccgcaggagctggagtacatcaactttatgcggctgcag
aacgtacctctccaggcgctagacgaggagcgggacagcgtcgacgtcgccaaggatgcc
gtccgtaacatgaacgcgcgacgcacgctgctcagctccgagctgccggataagcggaag
gcgattcaccaggcgcaccgtgagaaacagctgagtcggcgagagcgccgccagcagctg
cacgaggcgcatcaagcgatggtggacggaaagagccagcgactcgcgaaacggaaagag
gtgctgggcgacatgtgcacgagtccctccattctcgcgctgcggcgagaggagtgccgc
aatgagaagctgctgaacctcgccgcccgggccttcgtgtcgttcctgcgggcctacaag
gagcacgagtgtcgctacatctttcaactgcagctcattgacctcaccgacctcacgcac
ggcttcgcgcttttcaagatccccaactgcggtgagatcaagcggatgcgtgtgctgcgc
attcctctgcaggacgaattcgctccgtttgtgaagcagatggcgactgtgctgcgggag
aagcggcaacgtgccgccgaggagcagtcggccgcggcagctgtggacggtgggggcgat
gacagcccagatgcgaagagacatcgcacggagcgcaacgagaagttggaagcgctgaag
ctgctgaagatgtccaagtccgagcgcagccgcgcctggaagcaggcagagctggacgag
ctgctcaaagatagctattacgtgaagatggagcggcgtggcaaggtaaaccggcacgtg
gtggacgagaagatgggcgtggaagcaatcgagaactccttcatgagtgcgcgagagcga
aaggaggcgcagcttgcccgcaaggcgcgctga
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integrated database retrieval system
