KEGG   Leishmania mexicana: LMXM_34_4360
Entry
LMXM_34_4360      CDS       T02288                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit,putative
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lmi  Leishmania mexicana
Pathway
lmi03030  DNA replication
lmi03410  Base excision repair
lmi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMXM_34_4360
   03410 Base excision repair
    LMXM_34_4360
   03420 Nucleotide excision repair
    LMXM_34_4360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lmi03032]
    LMXM_34_4360
   03400 DNA repair and recombination proteins [BR:lmi03400]
    LMXM_34_4360
Enzymes [BR:lmi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LMXM_34_4360
DNA replication proteins [BR:lmi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    LMXM_34_4360
DNA repair and recombination proteins [BR:lmi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      LMXM_34_4360
SSDB
Motif
Pfam: POL2_thumb DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 zf_DPOE_2 zf-DPOE HARE-HTH
Other DBs
NCBI-GeneID: 13451150
NCBI-ProteinID: XP_003879433
UniProt: E9B6W6
LinkDB
Position
34:<1640204..>1647118
AA seq 2304 aa
MSTRLESGTKVGWLFNYHPTTEVLQEEEDAVAGEGAQRAALVLLFQDLAGDTFYVHLHYD
PYILVQAVEGHEREVELGLMSTFGPQIISEIIAVEKEDLDLVNHLSGKKRVYLKVVFRNV
QDLTTVRGRLEKTVKLNASLGSENPLRSQFSGSLGDAMAKTFAEDPLYSAAGSSRWMDWV
QDIREYDVKYYMRVAIDMKVYCGLWYDVTVTERGARVQRCDDSRYAPAMPRVIAFDIETT
KAPLRFPQPEVDEVYMISYMLDGRGYLIINREIVTEDIAPFEYTPKPEYEGFFDTFNEEN
EAATLRRFFDEMRKYKPNVYVTYNGDYFDFPFIHARALYHGMNMRNEIGFTQTADGAFLN
KQIPHLDCFYWVKRDSYLPQGSQGLKAVTKYKLGYEPIEVDPEDMLPLAQSQPQRMASYS
VSDAVSTWYLYQKYVHPFIFSLATIIPMPPDDVLRKGSGGLCESLLMVQAEANNVVFPNK
KEAERERFYEGHLIDTETYIGGRVEALRSGVYRSDIPMTFDMNPDTYQSLMDDVDEALRF
TLEVENGVKVEEVTNLKEVRAAVLAKLTNLRDRPHQQEKPFIYHLDVGAMYPNIILTNRL
QPYAIARPDVCAGCCFNSPNNEAQCKRVMSWKWRAELFTAGRYEFQRVKAQLENESFAAG
VIDQANLAAVQKKAYGNRKGNVLEGTAYERKDDWKKNQSSNRGGSGAGYRQESRQQQREA
ADALLQREFGADRNGDGGTSDSDDDADGPKAYHKLNENTQFNMLKRRLSEYSRKAYGKIH
ETREVMRSNVVCQRENSFYVDTVRLFRDRRYEYKAALKTWKKRLDAAKDSDERKVCQSRC
VQMESLQLAHKCILNSFYGYVMRKGSRWSSMEMAGIVTYLGATLIQMARSLVQQIGVTLE
LDTDGIWCCLPNTFPENFTFTTTNPSKPKISISYPCVVLNKMVHDRYSNHQYQDLVSTGV
YKTHNECSIYFEVDGPYLAMLLPASREEGKSIKKRYAVFNPDGSLAELKGFELKRRGELM
LVKDFQSQVFRRFLDGSTLADAYASAAVVADAALDMLESKGEGYDTEEILEKIAESSNMT
RRLSEYPESQKSLAITTARRIAEFLGPQMVKDKGLACHFIISRMPAGRPVTERAIPVTIF
RADPAVRTHFLRKWTADTSVPSELNLKTLLDWDYYTARFSACVQKIVSIPAALQSLPNPV
PRVVHPEWLEKRIRHRNSRYRQVSLLGMLSKVQGKNEELVGVSSSAAAAAAVRVDENQGE
DVVMRKPGGSAGAVEGELQDLEDIVGGAGSGTVRHARKTKKAGAARAGERRGTAGEDAEA
KSDEDDVECEESEDDMERLQREADAELDTLAHDVKQRYFAPKSTNALDAEFFADRGTKRW
LAQRKDAWLQRARLRRELALENGLSEVALGGENSGAAAFGLATTPDVAGMNSHFIDLKSR
ALATVWNVLEVRENEESPGTVQVLAALEHSLYSFRVQVRRTVLVDADPALGLQAFDATEV
SGRVLPRRAAAGRLYQIDVPPGEEGERCLNELQVMEGVRQIYEKHRTRVDTFVEQLGCCV
SVDSARHLRNARRRPPSQRELFGIDEMNMHTYTNYLSRGAGDRAVFVFHAVTEQRGLIAA
VYPQTSTAFVVFIQPAEAAKPVINWGGICAESAKRLHTSTTEPIQVTSAVAVDQRAAWRQ
VHQHLSAALESTKAPLLAVLQSCQPTSALLQQRALPVGLPYLRILGAAEDERLLSDPFRW
TRLLARRLFERFFASLLWVEERLALSRVSGIPLCNIAQDSCVHVLDVLYSRALHRHNHVL
WCSSDPLITFDTVEERPREVCMAGGYTSWCVEFGLSRLDVVALLFSQAIEEGDDPNARVL
SDRGVSTHFNILRDLVADLLGQAMENILVDTLLNNVARWLRDPASSCYEPRLVELLSSLA
HRALTGILLRLAKLGGRAVKVDGSSVTVLTSKYSLQEAVSFARFMTASLQDQPMLVLLSL
HPLRYWCPYVVLDPCDYAGLFITEDAIKFKEAEGPTRSDLHVAHQLTMASRLPSRVRNTF
LERVVETLYRLNASAHRVYCDTVVDHTVTLATRHDHLTRRLLQDSQKFFEGVLQTDIMDE
VQRVTDTRDLYTEEEHAAHERGELTLWSSGAVALEYAKCVCRVLELIPCNGAVGKVRNNC
MRLCGISPFSAQSQFQADPFLAHRLQSVTCSFCNSNISIDLLVRRKSVTSPFTCTACAAP
IAAASMEGTLVRHVSQLLRVYNQQDFVCTKCREMATTYVAERCCGALVSKAAPVEGELRA
LHHLAKIQGFAWLAESVEAALLCT
NT seq 6915 nt   +upstreamnt  +downstreamnt
atgtcgacgcggctggagagcgggaccaaggtggggtggctgtttaactaccaccccacc
accgaggtgctgcaggaggaggaggacgctgtcgccggcgagggggcacagcgagcggcg
ctcgtactgctcttccaggacctcgccggtgacaccttctacgtgcacctccactacgac
ccgtacatcctcgtgcaggccgtcgagggtcacgaacgcgaggtggagctcggcctcatg
tccacctttggcccgcagatcatcagcgaaattatcgccgtggagaaggaagatcttgat
ctcgtcaaccacctgagtggtaagaagcgcgtctacctcaaggtggtcttccgcaatgtg
caggacctcacgacggtgcgcgggcgtctggaaaagactgtcaagctcaacgcctccctc
ggttccgagaacccgctgcggagccagttcagcggctcgctcggtgacgccatggcgaaa
acgttcgccgaggatcccctttacagcgcagccggtagcagtcggtggatggattgggtg
caggacatacgcgagtacgatgtgaagtactacatgcgcgtcgccatcgacatgaaggtg
tactgcggcctctggtacgacgtgacggtcacggaaagaggcgcgcgtgtgcagcggtgc
gacgacagccgctacgcgccggccatgccacgtgtcatcgccttcgacattgaaacgaca
aaggctcctctgcgctttccgcagccggaggtggatgaggtgtacatgatatcgtacatg
ctggacggtcgcggctacctgatcatcaaccgcgagatcgtgacggaggacatcgcgccg
ttcgagtacaccccaaagcccgagtacgagggctttttcgacaccttcaacgaggagaac
gaggcagcgacgctgcgacgcttcttcgatgagatgcgcaagtacaagccgaatgtgtat
gttacatacaacggcgactacttcgacttccccttcatccacgcccgtgccctgtaccac
ggaatgaatatgcgcaatgagatcggcttcacgcagacggccgatggcgccttcctgaac
aagcagattcctcacctcgactgcttctactgggtgaagcgggactcgtacttgccgcag
ggcagtcaaggcttgaaggcggtcaccaagtacaagctcggctacgagcctatcgaggtg
gaccctgaagacatgctccctctcgcgcagtcgcagccgcagcgcatggcctcgtactcg
gtgtcggacgctgtttcgacgtggtacctctatcagaagtacgtgcaccccttcatcttt
tccctcgccacgattattccgatgccaccagacgacgtgctgcgcaagggctcaggtggc
ctgtgcgagtcgctgctgatggtgcaggcggaggcgaacaacgtggtatttccaaacaag
aaggaagccgagcgggagcgtttctacgagggccatctaattgacacagaaacgtacatc
ggcggccgcgtcgaagcgctgcgcagcggcgtgtaccgctccgatatcccaatgaccttt
gacatgaatcctgatacctaccagagtctcatggacgacgtcgacgaagcgctccgcttc
accctcgaggtggagaacggtgtgaaggtagaggaggtgacgaatctgaaagaggtgagg
gcggccgtcctcgccaagctaacgaacctgcgcgaccggccgcaccagcaagagaagccg
ttcatctaccatctcgacgtcggcgccatgtatccgaacatcattcttacaaaccgcctg
cagccgtacgccattgcgcgaccagacgtgtgcgctgggtgctgcttcaactccccgaac
aacgaggcgcagtgcaagcgcgtcatgtcatggaagtggagggccgagctcttcaccgcc
ggtcgctacgagtttcagcgggtcaaggcccagctcgagaacgagtccttcgctgccggc
gtgattgaccaggcgaacctcgcggccgtgcagaaaaaggcgtacggcaaccgcaagggc
aatgtgctggaaggcaccgcttacgagcggaaagacgactggaaaaagaaccagagcagt
aacaggggcggcagcggtgccgggtaccgacaggagtcgcggcagcagcagcgcgaggct
gccgacgcgcttctccagcgcgagtttggtgccgatcgcaacggtgatggcggcacctcc
gactcggacgacgacgccgacggcccaaaggcgtaccacaagctcaacgagaacacgcag
ttcaacatgctgaagcggcggctcagcgaatatagtcgaaaggcctacggcaagattcac
gagacgcgcgaagtgatgcggtcaaatgtggtgtgccagcgcgagaactccttctacgtc
gacacggtccgcctctttcgcgaccgccgctacgaatacaaggcagcactgaagacatgg
aagaagaggctggacgctgcgaaggactcggacgagcgcaaggtgtgccagagtcgctgc
gtgcagatggaatcgctgcagctggcgcacaagtgcatcctcaactcgttttacggctat
gtgatgcggaaaggctcgcggtggtcgagtatggaaatggcaggcatcgtcacctatctc
ggcgcgacgctgattcagatggcccgctcgcttgtccagcagatcggtgtgacactcgag
cttgacacggatggcatctggtgctgtcttcctaacacgtttcccgagaacttcacgttt
accacgacaaacccgtccaagccgaagatatccatatcgtacccgtgcgtcgtgctgaac
aaaatggtgcatgatcggtactcaaatcaccagtaccaggaccttgtcagcacgggcgtg
tacaagactcacaacgagtgctcgatttactttgaagtggacggcccgtacctcgccatg
ttgctccctgctagtcgcgaggagggcaaaagcatcaagaagcgctacgccgtcttcaac
ccggacggcagcttggccgagctcaaggggtttgagctgaagcgtcgcggcgagctgatg
cttgtcaaggacttccagtcacaggtattccgccgcttcctcgacggcagcacgctcgct
gacgcgtatgcctcggcggctgtcgtggcggatgccgcgcttgacatgctcgagtccaaa
ggcgaaggctacgatacagaggagatcctggaaaagattgcggagagcagcaacatgact
cggcgcctctccgagtaccccgaatcgcagaagtcgctggccatcacgacagcacggcgc
attgccgagttcctgggaccgcaaatggtgaaagataagggcctggcgtgccacttcatc
atctcacgcatgccggcgggccgccccgtcacggagcgggcgattcccgtcacaatcttc
cgcgcggacccggcagttcgcacgcattttctgcgcaagtggaccgccgacacgtcggtt
ccgtccgagctgaatttgaagacgctgctggactgggattactacaccgcacgcttcagc
gcctgtgtgcagaaaatcgtgtctatcccagctgcactgcagtcgctgccgaacccggtg
ccgcgcgtggtgcacccagagtggctggagaagcgcattcgtcaccgcaactctcgctac
cgccaagtctcacttctcggcatgctatccaaggtgcagggcaaaaacgaggagctcgtt
ggcgtgtcgtcatcggcggccgccgctgctgcagtcagagtggacgagaaccagggcgag
gacgtggttatgcggaagccggggggtagtgcgggcgctgtagagggagagctccaggac
ttggaagacatcgtgggcggtgcaggcagcggcaccgtacgccacgcacggaagacgaag
aaggccggtgcggcccgtgctggtgaacggcgaggtaccgcgggggaggacgctgaagcg
aaatcggacgaagacgacgtggagtgtgaggagtcggaggatgacatggagcggctgcag
cgcgaggcggatgccgagctggatacgctggcgcatgatgtgaagcagcgctactttgcg
ccgaagagcacgaacgcgctcgacgcagaattttttgccgaccgtggtacaaagcggtgg
ctggcgcagcgcaaggacgcgtggctacaacgagctcgtctgcgcagggagctggcgctc
gagaacggcctgagcgaggtcgctctcggtggggagaacagtggcgcagcggctttcggg
ctagcgacgacgcccgatgtcgctggcatgaacagccacttcatcgatctaaagtcacgc
gcgctggcgaccgtttggaacgtgctcgaggtgcgcgagaatgaggaaagccccggaact
gtgcaggtgcttgcggcgctagagcacagcctctactccttccgtgttcaggtgcgtcgc
accgtccttgtcgacgcggaccccgcactgggcctgcaggcgttcgacgctactgaggtc
agcgggcgggtgctgccgcgccgcgcagcagcaggtcgcctctaccagatcgatgttccg
cctggcgaggagggggagcggtgcctcaatgagctgcaagtgatggagggcgttcgccag
atctacgagaagcatcgcacgcgcgtggacacgtttgtcgagcaactcggttgctgcgtc
tccgtcgactcggcgcgacacctgcgcaacgcgcgtcgtcgcccaccgtcgcagcgtgag
ctctttggcatagatgagatgaacatgcacacgtacacgaattatctcagccgtggcgcc
ggggaccgtgccgtgttcgtcttccacgcggtgacggagcagcgcggtttgattgctgcc
gtttacccgcagacaagcactgccttcgttgtcttcattcaaccagctgaggcggcgaag
cccgtgatcaactggggcggcatttgcgcggagagcgcgaagcggctgcacacgagcacg
acggagccgattcaggtcacatccgccgtggcggtggatcagcgggcggcgtggcgacag
gtccatcagcacctgagcgccgctttggaaagcaccaaggcgcctctcctggctgtgctg
cagagttgccagcccacgtcggcactcctgcagcagcgcgcgttgcctgtgggactgccg
tacctacgtatcctcggcgctgcggaggatgagcggctgctgagcgacccgttccgctgg
acgcgtctgctggcgcggcggctgtttgagcgcttctttgcgtcgctgttgtgggtagag
gagcgtctggcgctgagccgtgtctccggcatcccgctttgcaacattgcccaggacagc
tgcgtgcatgtgctggatgtgctgtacagtcgtgccctgcaccggcacaaccacgtgctg
tggtgcagcagcgatcctctcattacttttgacaccgtggaggagcgtccacgcgaggtg
tgcatggccggcggctacacttcgtggtgcgtcgaattcggcctttcgcgtctggacgtc
gtcgcgctgctcttctcacaggcgattgaggagggtgatgacccgaacgcacgggtgctg
tctgaccgtggcgtatccacgcacttcaacatcttgcgtgatctggtggccgacttgctg
ggccaggccatggagaacatcctcgtcgacacactcctcaacaacgtggcgcggtggctg
cgcgacccagcgtcctcctgctacgagccgcgcttggtggagctgctcagcagcctcgca
caccgtgcgctcacaggcatcctgctccgcctcgccaagctcggcggccgcgccgtaaag
gtggacggcagttccgtcaccgttctcacctccaagtactcgctgcaggaggcggtgagc
ttcgcccgctttatgacagcatcgcttcaggaccagccaatgctagtgctgctctcgctg
catccgctgcgctactggtgtccatacgttgtgcttgacccttgcgactacgctggcctg
ttcatcaccgaggacgccatcaagttcaaggaggccgaggggccgacacgatcggatctg
cacgtagcgcatcagctcacgatggctagccgactgcccagccgtgtccgcaatacgttt
ctggagcgcgttgtcgagactctctaccggctgaacgcgtcagcacaccgcgtgtactgc
gacacagtggtcgatcacacggtcacgctcgccacgcgacacgaccacctgacacggcgc
ttgctgcaggactcgcagaagttctttgagggtgtcctgcagacagacatcatggacgag
gtgcagcgcgtgacggacacgcgcgacctgtacaccgaggaggagcacgcggcacatgag
cgtggcgagctgacgctgtggtccagcggcgccgtggcactcgagtacgcgaagtgtgtg
tgtcgcgttctggagctgatcccgtgcaacggcgcggtcggaaaagtgcgcaacaactgc
atgcgtctctgcggcatcagccccttctccgcccagtcgcagtttcaggccgatccgttt
ctggcgcaccgccttcagtctgtcacatgcagtttctgcaactcaaacatctcgatcgac
ttgcttgtgaggcggaagtcggtgacgtcgccatttacgtgcacggcatgtgcggcgccc
attgcagcagcttccatggaaggaacgctggtccgtcatgtgagccagctgctgcgagtt
tacaaccagcaggactttgtgtgcacaaagtgtcgtgagatggcaacaacctacgtggcc
gaaaggtgctgtggcgccctcgtcagcaaggcagcgccggtagaaggcgagcttcgggca
cttcatcaccttgcgaagatacaaggctttgcgtggcttgccgagagcgtggaggcggcg
ctcctctgcacgtga

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