Leishmania mexicana: LMXM_36_1840
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Entry
LMXM_36_1840 CDS
T02288
Name
(RefSeq) putative DEAD box RNA helicase
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmi03041
]
LMXM_36_1840
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_36_1840
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_36_1840
Spliceosome [BR:
lmi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
LMXM_36_1840
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
90S particles
Helicases
LMXM_36_1840
Pre-60S particles
LMXM_36_1840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
13448710
NCBI-ProteinID:
XP_003874530
UniProt:
E9ASV6
LinkDB
All DBs
Position
20:complement(<719908..>721884)
Genome browser
AA seq
658 aa
AA seq
DB search
MSARTPTSSPLGDHSDEAAAAAAEQSTKKRRRLRHHRCKSARETASNTAGEPYDELAETV
ENNDDANSVEGAQAAASNVVSTKRSEKRRREDDSDDGDGADADATGWSARQCHPQKPGAA
EGGKTSFPSASVSLAASSAPDGPTAVSMMQRSKELAKSIPAVTDYKSLQLNPHIVSALEQ
EFKFRELTPIQSRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIVCRSGFRPSNGTAAI
IIGPTRELCLQIEGVLLKLLKHFNGSLTFLCCIGGQSRNQEGFKLANGVMIVVASPGRLL
DHLKLTTDWHTKNLLLLAVDEADRVLDNGFEEDMREIVALLPKNRQTFLFSATQTTRVEQ
LARISFHKTPIFISMKSKKDKATVDTLEQGYVVCASEQRLLVLYHFVKKNLKKKVIVFFS
SRNSVSFHCELFNYIDVPCIAFHGKQKQHQRSATYMQFCNAPSGVLFTTDVAARGLDIPE
VDWIVQFDPPDDPVKYVHRVGRTARAGRCGNALMFLLPQEELFLKYLYDDAKVKVNEYTF
DMTKIKGNVQGQLEQLVGTNYYLRTSARQAYEGYLLSYSSCQLKNVFNIQNLDLAAVARG
FALSEPPPIKMDLSQSAAHMSKKSRHEFSAMRHTKNAKRRDVNAKSMSQRHQNISGEW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaggacacctacgtcgtcgccgcttggggaccacagcgacgaggctgcagct
gctgctgcggagcagtccacaaagaagcgccgccgtcttcgccaccaccgatgcaagtcc
gcacgggaaactgcctcaaacacagccggtgagccgtacgacgagcttgccgagacggtg
gagaataacgatgacgcgaattcggtagagggggcgcaggcggcggcgtctaatgtggta
tcgacgaagcgttcggagaagcgacgccgtgaggatgacagtgacgacggtgacggggcg
gacgcggatgcgacgggatggagcgcgcgtcagtgtcacccccaaaagcccggcgcagcg
gagggaggaaagacgtcgttcccctccgcctccgtgtccctggctgcgtcgtcggcgcca
gacggccccactgcggtaagcatgatgcagcgcagcaaggagctggccaagtccatccct
gccgtcacggactataagtcactgcagttgaacccccacatagtgtctgctctagagcag
gagttcaagttcagggagctgacgccaatccagtctcgctgcatccctgctgcgctgcag
ggacgcgatctcctcgccgaggcgaagaccggcgccggcaagacgctggcgttcttgatt
ccaattgtggagatcgtctgccgctcaggctttcgccccagcaacggcacggcggccatc
atcatcgggcctacccgtgagctctgcctgcagatcgagggtgtgctgctgaagctgctg
aagcacttcaacggctctctgacgttcttgtgctgcattggcggccagagccgcaaccaa
gagggcttcaagctcgccaacggcgtcatgatcgtggtcgcctcccctggccgcctgcta
gaccacttgaagttgacgacggactggcacacaaagaacctactgctgctcgccgttgac
gaggcggatcgcgtgctcgacaacggctttgaggaggacatgcgcgagatcgtggccctg
ctgcccaaaaaccgccagacgttcttgttctctgccacgcagacgacgcgtgtcgagcag
ctcgcgcgcatctcgtttcacaagacaccgatcttcatctccatgaagagcaagaaggat
aaggccaccgtggacacgttggagcagggctacgtcgtgtgcgccagcgagcagcgtctg
ctcgtgctctaccactttgtgaaaaagaacctgaagaagaaggtcatcgtcttcttcagc
agtcgcaacagcgtcagcttccactgcgagctcttcaactacatcgacgtgccctgcatc
gccttccacggcaagcagaagcagcaccagcgctccgcgacgtacatgcagttctgcaac
gcaccgagtggcgtgctcttcacgaccgatgtcgcggcacgcggtctcgacatccccgag
gtggactggattgtgcaattcgaccccccggatgatccggtgaagtacgtgcaccgtgtc
gggcgcaccgcgcgtgctgggcgctgcggtaacgcgctcatgtttctgcttccgcaggag
gagctgttcctcaagtacctctacgatgatgccaaggtgaaggtgaacgagtacaccttc
gatatgacaaagataaaagggaacgtgcaggggcagctggagcagctggtgggcaccaac
tactacctgcgcacttcggcgcggcaggcatacgagggctacttgctgagctacagtagc
tgccagctgaaaaacgtattcaacattcaaaacctcgacctcgctgcggtggcgcgcggg
tttgcactgagtgagccgccgccgatcaagatggatctctcccagtccgctgcgcacatg
agcaagaagtcacggcacgagtttagcgccatgcgccacaccaagaacgctaagcgacgc
gacgtgaacgcgaagtcgatgagccagcggcatcagaacatcagtggggagtggtga
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