Leishmania mexicana: LMXM_36_1850
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Entry
LMXM_36_1850 CDS
T02288
Name
(RefSeq) putative DEAD box RNA helicase
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_36_1850
03029 Mitochondrial biogenesis [BR:
lmi03029
]
LMXM_36_1850
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_36_1850
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
90S particles
Helicases
LMXM_36_1850
Mitochondrial biogenesis [BR:
lmi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
LMXM_36_1850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
13448711
NCBI-ProteinID:
XP_003874531
UniProt:
E9ASV7
LinkDB
All DBs
Position
20:complement(723060..724643)
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AA seq
527 aa
AA seq
DB search
MSSARRKLPKALREDGDGGNSESRTSMLARSTSSVRHQSLGSELLDDEEFKAKTFQDLGL
CEELCSACAEAGWQHPTRIQASAITVFAEGRDLIGVAQTGSGKTGAYALPLVNWLLTQRK
TPYLSVLVMVPTRELAQQVTAQFVLLGRSVGLRVATLVGGADMVEQACELSKRPHVIVGT
PGRVKDHLSNTKGFKLVKLHALVLDEADKMLDMDYEKEIDAILEQLPQDRRTMLFSATLS
TKIDRLQKASLLDPVLLQVHRKNTTVDTLKQYYIFAPFAQMLSYLHLFLTKETGNHILIF
CRSAALVHKITLALRILGHRALPLMGRMDQSNRNIALTKFKEGKVRMLICTDVAQRGLDI
PHTDVVVNFSLPDHVEDYIHRVGRTARAGAEGKAVNLISQYDIVLLQKIEQQTGVKCVEY
PSLAESEVQLVLQRVEDAEQEAIREIREDAEERSLEKESRQLTTARKGKRDRGDADMGYD
DAKHGTSDFATLRMRREHESIFEMTKKEQHKSLWAKRREAKQQAKSR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagcgcggcgcaagctccccaaggccttgcgagaggatggcgacgggggaaat
agtgagagcagaacctccatgctagcccggagcacctctagtgtcaggcaccaaagcctc
ggctctgagcttttggatgacgaggagttcaaggcgaagacattccaggacctcggtctc
tgcgaggagctttgttcggcgtgcgccgaggctggctggcagcacccgactcgcattcag
gcctccgctatcactgtctttgccgagggccgtgacctcattggtgtggcgcagactggt
agcggcaaaactggcgcctatgcactgcccctggtgaactggctcctgacccagcgcaag
acgccgtacctctctgtcctcgtgatggtgcccacacgcgagttggcgcagcaggtgacg
gcccagtttgtactgcttggccgcagtgtcggactgcgtgtggcgacgctggtgggtggc
gcggacatggtcgagcaggcctgtgagctgagcaagcggccgcatgtcatcgtcggaact
cctggccgggtaaaggaccacctcagcaacacgaagggcttcaagctcgtcaagctgcac
gccttggtgctggatgaggcggacaagatgctcgatatggactacgagaaagagattgac
gccattctggagcagctgccgcaggaccgccgcaccatgctcttctctgctacgctgagt
accaagattgaccgtctccagaaggcgtcgctgctggacccggtgctgctgcaggtgcac
cgcaagaacaccactgtggacacactcaagcagtactacatctttgccccgtttgcgcag
atgctatcctacctgcacctcttcttaacgaaggagacgggcaaccacatcctcattttc
tgtcgaagcgcggctttggtgcacaagattacgctggccctccgcatcttgggccaccgc
gcgttgcctctgatgggtcgcatggaccaaagtaaccgcaacatcgcgctcacgaagttc
aaggagggaaaagtgaggatgctcatctgcaccgatgttgcgcagcgtggcctggacata
ccgcacacggacgtcgtcgtgaatttctcgctgcctgaccacgtcgaggactacatccac
cgcgtcgggcgcacagctcgcgctggggccgagggcaaggctgttaatctcattagtcag
tacgacattgtactgctgcaaaagatcgagcagcaaacaggcgtcaagtgcgtcgagtac
ccctccctcgcggagagcgaggtgcagctggtgctccagcgtgttgaggatgcagagcag
gaggccatccgcgaaatccgcgaggatgccgaggagaggagcttggagaaggagtcgcgg
cagctgacgacggcgcggaaaggcaagcgcgaccgcggcgacgccgacatgggctacgac
gatgctaaacacggtacgagcgacttcgcaacgctgcgcatgcgccgcgaacacgagtcc
atcttcgagatgacgaaaaaggaacagcacaagtctctgtgggcgaagcggcgggaggca
aagcagcaagcgaaatcgcggtag
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