Leishmania mexicana: LMXM_36_2130
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Entry
LMXM_36_2130 CDS
T02288
Name
(RefSeq) putative DEAD box RNA helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
LMXM_36_2130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmi03041
]
LMXM_36_2130
03009 Ribosome biogenesis [BR:
lmi03009
]
LMXM_36_2130
Enzymes [BR:
lmi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LMXM_36_2130
Spliceosome [BR:
lmi03041
]
Complex A
U1 snRNP components
U1 related factors
LMXM_36_2130
Complex B
LMXM_36_2130
Ribosome biogenesis [BR:
lmi03009
]
Eukaryotic type
Pre-60S particles
Helicases
LMXM_36_2130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
P-loop_SecA
Cas3-like_C_2
DUF2239
ERCC3_RAD25_C
PRAI
Motif
Other DBs
NCBI-GeneID:
13448018
NCBI-ProteinID:
XP_003874564
UniProt:
E9ASZ0
LinkDB
All DBs
Position
20:842212..843927
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AA seq
571 aa
AA seq
DB search
MAERNYSPFSGFSTTSRGGGGGARSKGTSEGMGSKLAPVNWSTKSLVPGKWRVVDASAIR
KAASVKDDHGASKVKHLSDVDADEWRQANSITVSDSDQCPNPITEFDMLTAVPQYLKAKL
LEQGFKAPTPIQAQSWSIVLSGRDLVGVAKTGSGKTLAFIVPALAHIALQEPLKAGDGPM
VIVLAPTRELAQQIEQEAIKVLPQSIRCGCIYGGAPKGPQLGLLRQGVHILVATPGRLID
FMEIKRVNLLRVTYLVLDEADRMLDMGFEPQVRAICGQIRPDRQTLMFSATWPRDIQNLA
ASFQKNWVRINVGSMELLANKDVTQHFILTSEAAKLDELKRLMERHRNQRVLVFCKTKKT
ADYLEFQLKRNGVDCMAIHGDKEQRQREFILERFRKDPRLCVVATDVAARGLDIKELETV
VNYDFPMQIDDYVHRIGRTGRAGAKGASFTMITKHETQLNASTVFQLVELVERAGQEVPG
WLREWAEQGGGYHVPKRNRNMMGSFGRNGPRMRMPGDSPAAGAGSSGGHFGLAPHAKGSP
AFGMTDSGIQNKTFDYSSDDDSARPAKRARQ
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcgtaactacagccccttttctgggttctccaccacttcccgcggtggtggt
ggtggtgctcgaagcaagggcacctcggaggggatgggtagcaaactggcacctgtgaac
tggtcgaccaagagcctcgtcccgggcaagtggagggttgtcgatgccagcgcgatccgt
aaggccgccagcgtgaaagatgaccacggcgcaagcaaggtgaagcacctcagcgatgtc
gatgcggacgagtggcgtcaggccaactccatcacagtttccgactccgaccagtgcccg
aacccaatcacggagttcgacatgctcaccgccgtgccccagtacctgaaggcgaagctt
ctggagcagggattcaaggcgcccactccgattcaggcacagtcttggtcgatcgttctg
tcgggacgtgacctcgttggcgtggccaagaccggctccggcaagaccttggcgttcatt
gtgccagccttggctcacatcgcgttgcaggagccgctgaaggcgggggacggcccaatg
gtcattgtcctcgcgccgacccgcgaactggcccagcagattgagcaggaggcgatcaag
gtgctgccgcaaagcattcggtgcggctgcatttacggcggcgcgccgaagggcccgcag
ctcggcctgcttcgccaaggtgtgcatatcctcgtggccaccccgggccgcttgatcgat
ttcatggaaatcaagcgtgtgaacctgttgcgtgtaacgtacctggtgctggatgaggcg
gatcgcatgctggacatgggctttgagccgcaggtgcgcgccatctgcggccagattcgc
cctgaccggcaaacgctcatgttttcggctacgtggccgcgcgacatccagaacctcgcc
gccagctttcagaagaactgggtgcgcatcaacgttggcagcatggagcttctcgcgaac
aaggatgttacgcagcatttcatcttgacctcagaggcagcgaagctcgatgagctaaag
cggctgatggagcggcaccgcaatcagcgcgtgctcgtcttctgcaagacgaagaagacg
gctgactacctcgagttccagctgaagcgcaacggcgtggattgcatggccattcacggc
gataaggagcagcgtcagcgcgagtttatcctggagcgcttccgcaaggacccacgactg
tgtgtggtggccactgacgtggccgctcgcggtcttgacatcaaggagttggagacggtg
gtgaactacgacttccctatgcaaattgacgactatgttcaccgtatcggccgcacgggc
cgcgccggggctaagggtgcgtcctttacgatgatcacgaaacacgagactcagctgaac
gcgtcgacggtgttccagctggtggagctggtagagcgcgcggggcaggaggtgcctggg
tggttgcgcgagtgggctgagcagggtgggggctatcacgttccgaagcgcaaccgcaac
atgatgggcagcttcggccgcaacggcccgcgcatgcgcatgccgggcgatagcccagct
gctggcgccggcagcagcggtggccactttggcctggcgccacacgctaaaggctcgccg
gcgttcggcatgacggacagcggcattcagaacaagacgtttgactacagcagcgacgac
gactctgctcgaccggccaagcgcgcgcgccaatag
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integrated database retrieval system
