Larus michahellis (yellow-legged gull): 141732533
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Entry
141732533 CDS
T11135
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
141732533 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmic03036
]
141732533 (HDAC5)
Enzymes [BR:
lmic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
141732533 (HDAC5)
Chromosome and associated proteins [BR:
lmic03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
141732533 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
141732533
NCBI-ProteinID:
XP_074417754
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All DBs
Position
18:27115..48382
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AA seq
1307 aa
AA seq
DB search
MLLSGRAGPRCKDGGAAGRARGGAAGHRAGLPGGAGTAPAPQLVLTAPPDSHLCTSPRLC
CHPLATMDPQSDTEGGSSREPSLELLSHAQLHATLPAPGAEGPAEVCGAPEACGERRGPG
LDAAARERQLQRELLALKQQQQLQKQLLFAEFQKQHEHLTRQHEVQLQKHLKQQQEALAA
RRQQELEQQRQRERQEALEQQQRLEQLHALRTKDKSRESAIASTEVKLKLQEFLLSKTKE
PGTGPPNHSLPQHPKCWAHHTSLDQSSPPQTGSPGTPPSYKLPLLGTYDGRDDFPLRKTA
SEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEITVSSVCSSAPGSGPSSPN
SSHSAIAENGFTGSVPNIHAEVGAAGGTRVCGACALLPQHRALTLDGASQLSLYTSPSLP
NISLGLQATVTVTNSHLNASPKLSPQAEAERPAVATLRPGAALTGKFLSTSSIPGCLLGV
ALEGDPPAGPASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERAGSVRTVSKLPRHRP
LSRTQSSPLPQSPQALPHGALPHGTLQHHFLDKQQVQLGKLLPKAGELARQPPTHPEETE
EELTEQQSPPPGDGVPPGPPVAIASPDASDPPERLQDPEMPHEEPGDSGDEAEGSGVSDV
TELGVTYKQVFPEAPLQLYPAPTLGILALPHPALARTQSSPASAAIKPPAPDGPPKHLFT
TGVVYDTFMLKHQCTCGNTNIHPEHAGRIQSIWSRLQETGLLGKCERIRGRKATLEEIQT
VHSEHHTLLYGTSPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVR
MAVGCLVELAFKVAAGEIKNGFAVIRPPGHHAEESTAMGFCFFNSVAISAKLLQQKLSVG
RILIVDWDIHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPEEVGSGMGVGYNINI
AWTGGVDPPIGDVEYLTAFRTVVMPIANEFSPDVVLVSAGFDAVEGHLSPLGGYSVTAKC
FGHLTKQLMMLAGGRVVLALEGGHDLTAICDASEACVSALLGLELEPLDPSLLQQKPNVN
AVATLEKVIEIQSETLRPGSEGGTWTLPGSLGLSLTPGNTEGPPGLILSWGGTEGSLELP
LPSGDPSGSVPDMGGDQGTVLALGGPGGVSSAVTGILGGFLGLSLPWGGGPEVTCHGGPM
GPPELPLPRTSWGFPRLSLPWGGSPGLSPPWGSHKVPRFVLAVGDTEGPLDCPCHGGPRR
SLGCPLHRGPRGGPQCCPSCGWHRGPIGPPQLVPTMVGVVGSPGLST
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgtcggggcgggcggggccccgctgcaaagatggaggggcggcggggcgcgcg
cggggcggcgcggccgggcaccgcgcagggctcccaggcggtgcgggcacagccccagca
ccccagctggtgctgacggcccccccagacagccacctctgcacatccccccgcctctgc
tgtcacccactggccaccatggacccccagagcgacacagagggggggtccagccgtgag
ccctcgctggagctcctgtcccatgcccagctccacgccaccctccctgccccaggggcg
gaggggccggcagaggtgtgtggggcacccgaagcgtgcggggagcgccgggggccaggg
ctggatgcggcggcgcgggagcggcagctgcagcgggagctgctggccctcaagcagcag
cagcagctccagaagcagctgctcttcgccgagttccagaagcagcacgagcacctcacc
cgccagcatgaggtccagctccagaagcacctcaagcagcagcaggaagcgctggccgcc
cggcggcagcaggagctggagcagcagcggcagcgggagcggcaggaggccctggagcag
cagcagcgcctggagcagctccatgccctgcgcaccaaggacaagagccgcgagagtgcc
atagccagcacagaggtgaagctgaagctgcaggagttcctgctcagcaagacgaaggag
ccgggcaccggcccccccaaccattccctcccccagcaccccaaatgttgggctcaccac
acctcgttggaccagagttcccccccccagaccggcagcccggggacccccccatcctac
aaactccccctcctcggcacctacgacggccgggatgatttcccgctccgcaaaaccgcc
tccgaacccaacctgaaagtgcgctcgcggttaaaacagaaggtggcggagcggaggagc
agccccctcctgcgcaggaaggacggcaccgtcatcagcaccttcaagaagcgcgccatc
gagatcacggtgtcctcggtgtgcagcagcgcccccggctccgggcccagctcccccaac
agctcccacagcgccatcgccgagaacggcttcaccggctctgtccccaacatccacgcg
gaggtaggagccgccgggggcacacgcgtgtgcggggcgtgtgcgctcctgccccagcac
cgagccctgacgctggacggcgccagccagctcagcctctacacgtccccgtccctcccc
aacatctccctggggctgcaggccaccgtcaccgtcaccaactcccacctcaacgcgtcc
cccaagctgtcaccgcaggcggaggctgagcggccagctgtggccaccctgcgccctggg
gccgccctcactggcaagttcctgagcacgtcctccatcccgggctgcctgctgggggtg
gccctggaaggagaccctcccgccggccccgcgtccctgctgcagcacgtcctgctgctg
gagcaagcgcgccagcagagcaccctcattgctgtgcctctgcacgggcagtcaccactg
gtgacaggggagcgcgcggggagcgtgcggacggtgagcaagctgccgcggcaccggccc
ctgagccgcacgcagtcgtccccgctgccccagagcccccaggccctgccccacggcgcc
ctgccccacggcaccctccagcaccacttccttgacaagcagcaggtccagctgggcaag
ctgctccccaaggcgggggagctagcgcggcagccccccacccaccccgaggagacggag
gaggagttgacggagcagcagtcgccccccccaggcgacggggtcccccctggcccccct
gttgccatcgcctccccggacgccagcgaccccccagagcggctgcaggaccctgaaatg
cctcacgaggagccgggtgacagcggggacgaagccgagggctctggggtctccgatgtc
actgagctgggggtcacatacaagcaggtgttccccgaggcgccgctgcagctgtatcct
gcccccaccctgggcatcctggcgctgccccacccggccctcgcccgcacccagtcgtcc
cccgccagcgccgccatcaagccccccgcacctgacgggccccccaagcatctcttcacc
acaggtgtggtgtacgacaccttcatgctgaagcaccagtgcacctgtgggaacaccaac
atccaccccgagcacgctggtcgcatccagagcatctggtcccgcctgcaggagaccgga
ctcctcggcaagtgcgagcgcatccggggcaggaaggcgacgctggaggagatccaaacg
gtgcactcggagcatcacacgctgctctatggcaccagccccctcaaccgccagaaactc
gacagcaagaagctcctgggtcccattagccagaagatgtacgcagtgctgccgtgcggg
ggcatcggggtggacagtgacacggtgtggaatgagatgcactcctccagcgccgtgcgc
atggcagtgggctgcctggtggagcttgccttcaaggtggccgctggggagatcaagaac
ggcttcgccgtcatccgcccccccggacaccatgcggaggagtccacggccatgggcttc
tgcttcttcaactcggtggccatctcggccaaactgctccagcagaagctgagcgtgggc
aggatcctcatcgtggactgggacatccaccacgggaacgggacccagcaagccttctac
agcgaccccaatgtcctctacatctccctgcaccgctatgatgacggcaacttcttccca
ggcagtggagcgcctgaggaggtcggcagcgggatgggagtgggctacaacatcaacatc
gcctggaccgggggcgttgacccccccatcggggatgtggagtatcttaccgccttcagg
accgtggtgatgcccatcgccaatgagttctccccagatgtggtgctggtctcagccggc
ttcgacgctgtcgagggtcacctctccccactcggtggctactccgtcaccgccaaatgt
tttggccacttgacgaagcagctgatgatgctggcagggggccgggtggtgctggcactg
gagggggggcacgacctgacggccatctgcgacgcctcggaggcctgcgtctccgctctg
ctcggcctggagctggagccgctggatccgtccctgctgcagcagaagccaaacgtgaac
gcggtggccaccctggagaaggtcatcgagatccagagtgagaccctgcggccggggtca
gagggggggacatggaccctgccaggatccctggggctgtcactgacaccggggaacaca
gaggggcccccggggctgattctgtcatgggggggcacagaggggtctctggagctgcct
ttgccgtcgggggatcccagcgggtctgtccctgacatgggtggggaccaggggactgtc
cttgccttggggggacctggaggggtctccagtgctgtcactgggattctgggggggttc
ctggggctgtcactgccttggggggggggcccagaggtgacctgccatgggggtcccatg
ggtcctcctgagttgcccctgccacgaacgtcatgggggttccccaggttgtccctgcca
tggggggggtccccagggctatcccctccatgggggtctcacaaggtccctaggtttgtc
ctggctgtgggtgacacagagggtcccttggactgtccctgccacgggggtcctaggagg
tccctgggctgtcccctccaccggggtcccaggggaggtccccagtgctgtcccagctgt
gggtggcacaggggtcccataggtcccccccagcttgtccctaccatggtgggtgttgtg
ggttccccagggctgtccacgtag
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