Larus michahellis (yellow-legged gull): 141732561
Help
Entry
141732561 CDS
T11135
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03013
Nucleocytoplasmic transport
lmic03015
mRNA surveillance pathway
lmic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141732561 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
141732561 (CASC3)
03015 mRNA surveillance pathway
141732561 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141732561 (CASC3)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141732561 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
141732561
NCBI-ProteinID:
XP_074417829
LinkDB
All DBs
Position
18:2118013..2130396
Genome browser
AA seq
717 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSADSAASAPRSRSASGSGSGSGSPRPPHRPPRGSAGA
LSAGPRSRGAESAAGGAAKSAPESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESA
KVELKQDSNDSCESAAKAEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLD
DDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPK
TRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPNKPPRHQGTDSTS
APPRNFTNRNSAGTGRMHPPRNYPRMGGYKETRPSYRTSEASVPHLSRNGEQAKQESNYR
AKRAEQTPPRDKSPEMEAAHVHSSPVKEEVALENQAMAADAAQPPPDRPVEKKSYSRARR
TRVKAGDAGKLADEVPASEGLTPVPPKPVQAETSPPPAKSSNWESPVESNLDGLEQEMTQ
MNLTEQNWTPGQSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQR
PPVPEPAPPMHISIMEGHYYDPLQFQGPIYTHSENPSPLPPQGMIVQPEMHLPHPGLHPH
QTPAPMANPGLYPPPVSMSPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPP
HLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEVPSPWRQQR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacgactcggactcggcc
gcctccgacagcgccgactcggccgccagcgccccccgctcccgatccgcctccggttcc
ggatcgggatctggttccccccgcccgccccaccgcccgccgcggggctccgccggcgcc
ctcagcgctgggccgcggagccgcggggccgagagcgccgccgggggggcggccaagagc
gcgcccgagtccgagtgtgaaagcgaggatggcattgaaggagatgctgtactctcggat
tacgaaagcgcagaagactcagaggcagaagaggaggattacagcgaggaagaaagtgcc
aaagtggaactgaagcaggatagtaatgactcctgcgagtcagcggcaaaagcagagaaa
ggggatgagaaacctgactccaaaggtgctgtaactggtgagaggcaaagcggggacggg
caggagagcactgaacctgttgaaaataaagttgggaaaaaagttcccaagcacctggac
gacgatgaggatcgaaagaacccggcttacatcccacgcaaagggcttttcttcgagcac
gacctccgagggcagacgcaggaggaggaggtcaggccgaagggtcgtcagcgaaagctg
tggaaggatgagggccgctgggagcacgacaaattccgggaggacgagcaggcgcccaag
accaggcaggagctgatcgcgctttatggttatgacatcaggtcagctcacaaccccgac
gacatcaagccgaggaggatgcgcaaaccgcggtttgggagtcctcctcagcgagaccca
aactggtccaacgagaggccaaataagcccccaaggcaccaaggcacagacagcacttca
gctcccccgcgtaacttcaccaacaggaactcggcaggaacaggcaggatgcacccacct
aggaactacccgaggatggggggctacaaagagacccgtccaagctaccgaacttcggaa
gcaagcgtcccacatctgtctcgaaacggcgagcaagctaaacaggagagcaactatcga
gcgaagcgcgcagagcaaaccccacccagagataagtcacccgagatggaagcggcgcat
gtccacagcagccctgtgaaggaggaggtcgctctggaaaaccaagccatggctgctgat
gctgcacagccaccgccagacagaccagtcgaaaagaagtcttattcccgggcaagaagg
accagagtcaaagctggggatgcagggaagctggcagatgaagtgcccgcttcagaaggg
ctgactcctgtgcctccaaaacctgtgcaagccgagacgtcgcccccaccagccaagagc
agtaactgggagtcgccagtagaatccaacttggatggactcgagcaagagatgacccaa
atgaatctcaccgagcagaactggactccggggcagtcgcagttcatacagccccgggag
ctgaggggtattcctaaccatatgcatgtgggaactgggccaccgcctcagtttaacagg
atggaggaaatggcggtgcaggggggccgtgtgaaacgctactcgtcgcagcggcagaga
ccgccggtgccggagcctgccccccccatgcacatcagcatcatggaagggcactactac
gacccactacaattccagggaccaatctacacccacagcgagaacccgtccccgctgccg
ccccaagggatgatcgtacagccagaaatgcacctccctcatccaggtttacatccccac
cagacaccagcccccatggcaaaccctggcctgtaccctccgcccgtctccatgtccccg
ggccagcccccgccgcagcagctgctagcgccgacttacttctcccctcctggagtcatg
aattttgggaatcctggctacccctaccccccaggagcgctcccccctccgccccctcct
catctctattccaacacgcaggcccagtcccaggtgtacggaggggtcacgtactacaac
actgtccagcagcaagtgcagcccaagccttctccgcctcgaaggacgtcccagcctgtg
actatcaagccaccgcctccggaggtaccgtccccttggcgacagcaaaggtga
DBGET
integrated database retrieval system
