Larus michahellis (yellow-legged gull): 141734027
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Entry
141734027 CDS
T11135
Symbol
SMARCC2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141734027 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmic03021
]
141734027 (SMARCC2)
03036 Chromosome and associated proteins [BR:
lmic03036
]
141734027 (SMARCC2)
Transcription machinery [BR:
lmic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
141734027 (SMARCC2)
Chromosome and associated proteins [BR:
lmic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
141734027 (SMARCC2)
PBAF complex
141734027 (SMARCC2)
GBAF(ncBAF) complex
141734027 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
141734027
NCBI-ProteinID:
XP_074421293
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All DBs
Position
22:5755366..5765662
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AA seq
1203 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLSKLKDIVKRHQGTVTEDKSNASHIVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVARRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEDLVTETVKGKPELQTSASQQMLNFPDKSKEKP
ADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGAEEARAEAQPAEEKKEAKEPRDGAAEEEAKEKPGETPKKEEEKGKEVEGEKEPD
KGDGDGAGEPEKEKEGKEGPDEAPKEPPEPEAERKAKVERDIGEGNLSTAAAAAXAAAAV
KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR
QAFHMEQLKYAEMRARQQHFQHLQQQQQQQPPPLPPGAQPLPAAAAGAPLAPAAHPLAVP
PAPAMVAPAEPVGQPLPGAPPPQPPPPPGAPAVPHAPAPFPGQQPPSQSLAGSLGGSGHP
AVPGNAPAALPFGLPPSAIPFSMANPPAEPLGATFPANPPALPLHGALASSMPSGGCPPP
PTHLAWPCRTSRGARPPRTAPPSWPPCREASFPTPACSQTKAPLADGPHRAQPQHGHPSP
PTQ
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtccgcctctggctcggcaagaactacaagaagtacatccag
gccgagccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtcttcggcaagcacgtcagcaacgcgcccctcaccaagctgccgataaaatgc
ttcttggatttcaaggcggggggagccctgtgccacatcctggcagcggcctataaattc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggaccgcaac
gtggagatgttcatgaccatcgagaaatccctggtgcagaacaactgcctggcccggccc
aacatctttctgcaccaggagattgaacccaagctgctgagcaagctgaaagacattgtc
aagaggcatcagggcacggtgaccgaggacaagagcaacgcgtcccacatcgtctgccct
gtccccgggaacctggaggaagaggagtgggtccggccggtcatgaagcgcgacaagcag
gtcctgctgcactggggctactacccagacagctatgacacctggatccccgccagtgag
attgaggcctccgtggaggacgccccgacgccggagaagccccggaaggtccacgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggactacgaggtgacg
gacgagaagagccctgtcgcccgcaggaagaagatctcggccaaaacgctgacggatgag
gtgaacagccccgactcagaccggcgggacaagaaggggggcaattacaagaagcgaaag
cgctcgccctccccctcgcccacccccgaggccaagaagaagaacgcgaagaagggaccc
tccaccccctacaacaaatccaagcgtgggcaccgtgaggaggagcaggaggacctgacg
aaggacatggacgagccctcgcccgtccccaacgtggaggaggtcaccctgcccaagaca
gtcaacaccaagaaggattcggagtctgcacccgtcaaggggggcaccatgacggacctg
gatgagcaggaggacgagagcatggagacggccggcaaggatgaggaggagaacggcacc
gggagcaagggggagcaggccaagaaccccgacctgcacgaggacaacgtgacagagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgccgagccctgcccgagttcttcaatggcaagaataaatccaagacccctgaa
atatacttggcttaccgcaacttcatgatcgacacgtaccggctgaacccgcaggagtac
ctgacctccaccgcctgccgccgcaacttggccggggacgtctgtgccatcatgcgggtc
cacgctttcctggagcagtggggcctcatcaactaccaggtggacgccgagagccggccc
acccccatgggccccccgccgacctcccacttccacgtcctggccgataccccctcgggg
ctggtgccgctgcagcccaagacgccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagatcgaagacctcgtcaccgagacggtgaaggggaagccggag
ctgcagacctcggcctcgcagcagatgctgaacttccccgacaagagcaaggagaagcca
gccgacatgcagaacttcggcctccgcacggacatgtacaccaagaagaacgtcccctcc
aagagcaaagccgccgccagcgccacgcgggagtggacggagcaggagacgctgctgctg
ctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtaggcagc
cggacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggacccctacctg
gaggactcggaggcgtccctggggccgctggcctaccagcccatccccttcagccagtcc
ggcaaccccgtcatgagcaccgtcgccttcctggcctccgtcgtcgacccccgcgtcgcc
tccgccgccgccaagtcggctctggaggagttctccaagatgaaggaggaggtgcccacg
gccctggtggaggcccacgtccgcaaggtggaggaggcggccaaggtgacgggcaaggcc
gaccctgcgttcgggctggagagcagcggcatcgccggcaccacctccgacgagccggag
cggatagaggagagcggcgcagaggaggcacgggcggaggcgcagccggccgaggagaag
aaggaggcgaaggagccccgggatggagctgctgaggaggaggcgaaggagaagcccggg
gagacacccaagaaggaggaggagaaggggaaggaggtggagggcgaaaaggagcccgac
aagggtgacggtgatggtgcaggggagccggagaaggagaaggaggggaaggaggggccg
gacgaggcgcccaaggagccgccggagcccgaggccgagcgcaaggccaaggtggagcgg
gacatcggcgaggggaacctctccaccgccgccgccgccgccnctgccgccgccgccgtc
aaggccaagcatttggcagccgtggaggagcgtaagatcaagtcgctggtggctctgctg
gtggagacgcagatgaagaagctggagatcaaactgcggcacttcgaggagctggagacc
atcatggaccgggagcgcgaggctctggagtaccagcggcagcagctgctggcggaccgt
caggccttccacatggagcagctgaagtacgcggagatgcgcgcccgccagcagcacttc
cagcacctccagcagcagcagcagcagcagccgcccccgctgcccccgggggcccaaccc
ctgcccgccgccgccgccggtgcccccctggcccccgccgcccacccgctggccgtgccg
cccgcccccgccatggtggcccccgccgagcccgtggggcagccgctgcccggggccccc
ccgccgcagccgcccccgccgccgggcgccccggccgtcccgcacgccccggcgccgttc
cccgggcagcagccgccgtcccagagcctggcggggagcctcggtggcagcggccacccc
gccgtgcccggtaatgcccccgcggccttgcccttcggattgcctccatccgccattcca
tttagcatggctaacccccccgccgaacccctcggcgccaccttccccgctaacccgccc
gccctcccgctgcatggggccctcgccagcagcatgccgtccggggggtgcccccccccg
cccacccacctggcctggccctgccgcacctcgcggggggctcggccgccgcgcacagcc
ccgccatcgtggccgccgtgcagggaagcctccttcccaaccccggcctgctcgcagacc
aaggccccccttgcagacggaccccaccgcgcccagccccagcacggccaccccagcccc
cccacgcagtga
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