KEGG   Larus michahellis (yellow-legged gull): 141734240
Entry
141734240         CDS       T11135                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
lmic  Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:lmic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lmic03016]
    141734240
Enzymes [BR:lmic01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     141734240
Transfer RNA biogenesis [BR:lmic03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    141734240
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf_CCCH_4 FMN_dh zf-CCCH_9 zf-CCCH Zn_finger_prot Tim54
Other DBs
NCBI-GeneID: 141734240
NCBI-ProteinID: XP_074421826
LinkDB
Position
23:complement(2663827..2672427)
AA seq 665 aa
MAAAAVASGVAPVRARFLTSKEQFHAYLRARGEPSGGCEEEEEEEEKVKEEEEVGSCQSE
PPAKRVKSEDLGQDGESREDAGAAEKEPAERKRARGQNKSRPCMKPKHYEQSRLCPSVTQ
GCVEKCYFGPRCRFLHDIGEYMAAKPADLGRSCVLFETFGKCIYGITCRFAQAHLGDGYQ
NIVNTDLAKQWEGKSLVRNNLSKELQHQLRKRKFSFRKADEYLRGLGKPHGDGGKGGKAT
ERSTEEQEVSNCTTAQEGLGDGPECPALPEQGEDPKPDALQSRSPTAGEEASSVKTVGPL
TDEDVIKLRSCEKKKLEIQGKLYLAPLTTCGNLPFRRICKRFGADVTCGEMAVCTNLLQG
QSSEWALLKRHHTEDIFGVQLEGAFPDTMTKCAELLNQTIEVDFVDINVGCPIDLVYKKG
GGCALMTRSNKFEQIVRGMNSVLDVPLTVKIRTGVQEKINVAHKIIPKIREWGASMVTLH
GRSREQRYTRGADWDYIAECAKIASPMPLFGNGDILSYEDADRAMKMGVSGIMIARGALI
KPWLFTEIKEQRHWDISSSERFDILKDFTNYGLEHWGSDTQGVEKTRKFLLEWLSFLCRY
IPVGLLEHLPQKINERPPYYVGRDYLETLMASQNVDDWIRISELLLGAVPTNFTFLPKHK
ANSYR
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcggcggcggcggtggcgtccggggtggcgccggtccgcgcccggttcctcacctcc
aaggagcagttccatgcctacctgcgggcccggggcgagcccagcggcgggtgtgaggag
gaggaggaggaggaagagaaggtcaaggaggaggaggaggtcggcagctgccagagcgag
ccccccgccaaacgggtgaagtcagaggacctcggtcaggacggggaaagccgagaggat
gcgggagcagcggagaaggagcccgcggagcggaagcgggcccgggggcagaacaagagc
aggccgtgtatgaagcccaagcactacgagcagagcaggctgtgcccgtcggtaacgcag
gggtgtgtggagaagtgctactttggcccacggtgccgcttccttcacgacataggcgag
tacatggccgcgaagccggctgacctggggcgcagctgtgtgctcttcgaaaccttcggc
aagtgcatttacggcatcacttgccgctttgcccaggcccacctcggggatggctaccag
aacatcgtcaacacggacctggccaagcagtgggaggggaagtcgctggtgaggaacaac
ctttccaaggagctccagcaccagctgcgcaagaggaagtttagcttcaggaaggctgac
gagtacctccgtggtctgggcaagccccacggggatggtgggaagggaggcaaagccacg
gagcgttccacagaggagcaagaggtgtccaactgcacaacagcccaggaggggctggga
gacggtcctgaatgtcctgcgctaccggagcagggggaagatcccaaaccagacgccttg
cagagtcgcagccccaccgccggtgaggaggcttcctccgtgaaaacggtgggcccgctg
acagatgaagatgtcataaagctgcggtcatgtgagaagaagaagttggaaatccaaggc
aagctctacttggctccgctgaccacgtgcggtaacctccctttccgaaggatatgcaag
cgctttggggcagacgtcacctgtggagagatggctgtgtgcacaaacctgcttcagggc
cagtcctccgagtgggctctcctcaaacggcatcacaccgaagatatttttggggtgcag
ctggagggagcatttccagacacgatgaccaaatgcgcagagctcctgaaccagacaatt
gaagtggactttgtagacatcaatgtcgggtgtcccattgacctggtctacaagaaggga
ggaggctgtgctctgatgactcggtccaacaagtttgaacagattgtccgagggatgaac
tcggtgctggacgtcccactgactgtgaagatacggacgggggtgcaagaaaagattaat
gtggctcataaaataatccccaagatccgggagtggggagcgtccatggtcacgcttcac
ggccgatccagggagcagcggtacacgaggggtgccgactgggactacatagcagaatgt
gcgaaaatcgcaagccccatgcccctttttggaaacggtgatattttgtcttacgaagat
gctgatcgggccatgaagatgggtgtgtcgggaattatgattgcaaggggggcactcatc
aaaccgtggcttttcactgaaattaaggagcagagacactgggatatctcctccagcgag
agatttgatatcctcaaagacttcaccaactatggccttgagcactgggggtcggatact
cagggagtggagaagaccaggaagttcctgctggaatggctctcgttcctgtgcaggtat
attccagttggcttattagaacacctacctcagaaaattaacgagcggccgccttactac
gtggggagagactatctggagacactgatggcgagccaaaacgtggacgactggattaga
ataagtgagctgctgctgggagccgtacctaccaacttcaccttcctgcccaaacacaag
gcaaattcctacagatag

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