Larus michahellis (yellow-legged gull): 141734955
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Entry
141734955 CDS
T11135
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03015
mRNA surveillance pathway
lmic04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141734955 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
141734955 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmic03021
]
141734955 (SYMPK)
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141734955 (SYMPK)
Transcription machinery [BR:
lmic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
141734955 (SYMPK)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
141734955 (SYMPK)
U7-dependent histone pre-mRNA processing factors
141734955 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Cnd1
PDS5
INTS7_N
Motif
Other DBs
NCBI-GeneID:
141734955
NCBI-ProteinID:
XP_074423437
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All DBs
Position
26:complement(2043423..2056427)
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AA seq
1251 aa
AA seq
DB search
MAGPGGAEGPSPRRSVASQFFSEEESGDGRSTSERVVDLLNQAALISTDSKITILKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVVGFIEEACKRDIELLLKLIANLNMLLKD
ENVNVVKKAILTMTQLYKVALQWMVKSKVISELQEACWEMMAAMASDIILLLDSDNDGVR
THAIKFVEGLIITLSPRMADSDVPKRHENDISLERIPKDHPYIKYNVLWEEGKAALEQLL
KFMVHPAISSINLTAALGSLATIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLRHPSSGDFQPQITTLLVDLGTQQAEIARSMPSPRDTRKRPRDEPDATLKKM
KIEPPLGEDDEDKDLEPPMVAAPKAAGQASVPSDTDITAEFLQPLLTPENVANLVLISMV
YLPEAMPASFQATYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKHLKEEPKEEK
AAKPESVVIKRRLSALAQGQAISVLGAQGSAANLLEEEAPQAKRRPEPIIPATQPRLAGA
GGRKKVFRLADVLKPLSDAQMEKLKLSAIKRILRAERAVACSGAAQARVKILASLVTQFE
VPLKSEVLAFILDDVRGRLDLAFAWLFQEYNAYLSHLPAGSLERYDECLIGLLAGLQEKP
DQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVL
LDLSSHEKDKVRQQALLFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTE
VAAPWTEETIKQCLYLYLALLPHNHKLIHELASVYTEAIADIKRTVLRVIEQPIRGMGMN
SPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNG
LEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGDGSSAVSPLNPGELLIALHNIDSSKC
DMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQALTMYPRLGGFVM
NILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVVLQLPPPQLAAIFDKCPELREPLLS
HVRALTPHQQAHIPLSTMAILEASTRHEPDAREGPPGEEKPPKRPNEEEAKGKAAAAAPG
GGPSTGAPPAPSEAPPELGGADLEPPPIFISVPEDEESSGGAGSPPDATLEPPAAPPKDP
PATAEPPAAAPPLAEAAPGSPPSSEPPPPGTQSPEVPPGGAPEAPAGPAEG
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccggggggggctgagggccccagcccccgccgcagcgtggcctcccagttc
ttcagcgaggaggagagcggggacggacggagcacctcggaacgggtggtggatctcctc
aaccaggcggccttgatcagcactgactccaagatcaccatcctcaagcaggtgcaggag
ctgatcatcaacaaggaccccacgctgctggacaacttcttggatgagatcatcgccttc
caggctgacaagtccatcgaggtgcggaagtttgtggtgggcttcatcgaggaggcgtgc
aagcgggacatcgagctgctgctcaaactgatcgccaacctcaacatgctgctgaaggat
gagaacgtcaacgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcgaaggtgatcagcgagctgcaggaggcttgctgggagatg
atggcggccatggccagcgacatcatcctcctcctggactcggacaacgacggcgtccgc
acccacgccatcaagtttgtggaggggctcatcatcaccctctcgccccgcatggccgac
tctgacgtccccaagcgccacgagaacgacatcagcctggagcgcattcccaaggaccac
ccctacatcaaatacaacgtgctgtgggaggagggcaaggccgccctggagcagctcctc
aagttcatggtgcacccggccatctccagcatcaacctgacggccgcgctgggctccctg
gccaccatcgcccgccagcggcccatgttcatggccgaggtcatccaagcctatgagacc
ctccacgccaacctgccccccaccctggccaagtcgcaggtgagcagtgtccgtaagaac
ctgaagctgcacctcctgagcgtcctgcggcacccgtcctcgggggacttccagccccag
atcaccaccctcctcgtcgacctgggcacccagcaggccgagattgcccgcagcatgccc
agcccccgtgacacccgcaaacgaccccgtgacgagcccgacgccaccctcaagaaaatg
aagattgaaccccccctgggtgaggacgacgaggacaaggacctggagccgccgatggtg
gcggcccccaaagctgccggccaagccagcgtcccctcggacacggacatcaccgccgag
ttcctgcagccgctgctcaccccggagaacgtcgccaacctggtgctgatcagcatggtg
tacctgcccgaggccatgcccgcctcctttcaggccacctacacccccgtggagtcggcc
ggcaccgaggcgcagatcaagcacctggcccggctcatggccacccagatgacagcggcg
gggctcggcccgggcgtggaacagacgaagcacctgaaggaggagccgaaggaggagaag
gcggccaagccggagagcgtggtgatcaaacggcggctctcggcgctggcccagggccag
gccatctcggtgctgggtgcccaaggctcggctgccaacctgctggaggaggaagccccc
caagccaagcgtcgccccgagcccatcatcccggccacgcaaccccggctggcgggcgcc
ggcggccgcaagaaggttttccgcctggctgacgtcctgaagccgctgagcgacgcgcag
atggagaagctgaagctgagcgccatcaagcgcatcctgcgcgccgagcgcgccgtggcc
tgcagtggggctgcccaggcccgcgtgaagatcttggcttcgctggtgacgcagttcgag
gtgccgctgaagagtgaggtgctggccttcatcctcgacgacgtccgcggccgcctggac
ctggcctttgcctggctcttccaggagtacaacgcctacctgagccacctccccgccggc
agcctggagcgctacgacgagtgtctcatcgggctcctcgccggcctccaggagaagcct
gaccagaaggacgggattttcaccaaagtggtgctggaggcgccgctgatcaccgagagc
gccctggaggtcatccgcaagtactgcgaggacgagagccggacctacctgggcatgtcc
acgctgcgcgacctcatcttcaagcggccgtcgcggcagttccagtacctccacgtccta
ctggacctcagctcccatgagaaggacaaggtccgccagcaggccctgctcttcatcaag
cgcatgtacgagaaggaccagctacgggagtatgtggagaagttcgccctcaactacctg
cagctcctggtgcaccccaacccaccctctgtcctcttcggggctgacaaggacacggag
gtggccgcgccgtggacggaggagaccatcaagcagtgcctctacctctacctggcgctg
ctgccccacaaccacaagctcatccatgagttggcgtccgtctacaccgaggccatcgcc
gacatcaagcgcaccgtcctgcgggtcatcgagcagccgatccgggggatggggatgaac
tcgcccgagctgctgctgctggtggagaactgccccaagggagccgagacgctggtgacg
cgctgcctgcacagcctgacggacaaagtgcccccctcgcccgagctggtgaagagggtc
cgtgatctctatcacaaacggctgccggacgtgaggttcctcatccctgtcctcaacggg
ctggagaagaaagaggtgatccaggccctgcccaaactcatcaagctcaaccccattgtg
gtcaaggaggtcttcaaccgcctgctggggacacagcacggtgacggctcctcggccgtg
tccccgctgaacccgggggagctgctgatcgccctgcacaacatcgactcctccaagtgc
gacatgaagtccatcatcaaggccaccaacctgtgcttcgccgagcgcaacgtgtacacc
tcggaggtgctggcggtggtgatgcagcagctgatggagcagagccccctgcccatgctg
ctcatgcgcaccgtcatccaggccctcaccatgtacccccgcctgggcggcttcgtcatg
aacatcctctcccgcctcatcatgaagcaggtgtggaagtaccccaaggtgtgggagggg
ttcatcaagtgctgccagcgcacgaagccccagtccttccaggtggtgctgcagctgccc
cccccccagctggccgccatcttcgacaagtgccctgagctgcgggagccgctgctcagc
cacgtccgggccctcaccccccaccagcaagcccacatcccgctctccaccatggccatc
ctggaggcttccacccgccacgagcccgacgcccgggaggggccccctggagaggagaag
cccccgaagcggcccaatgaggaggaggcaaaggggaaggcagccgccgcagcgccgggg
gggggtcccagcacaggggccccccctgccccctccgaagcaccccccgagctggggggg
gccgatctcgagcccccccccatcttcatcagtgtccccgaggatgaggagagctcaggg
ggggccgggtccccccctgatgccaccctggagccccccgccgccccccccaaggacccc
cccgccaccgcggagccccccgcagcggccccccccctggccgaggcagcccctggcagc
cccccctcctcggagccgcccccaccgggcacccagagccccgaagtgcccccggggggg
gcccccgaagcccccgcggggccggcagaaggctga
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