Larus michahellis (yellow-legged gull): 141734962
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Entry
141734962 CDS
T11135
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmic03000
]
141734962 (HIF3A)
Transcription factors [BR:
lmic03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
141734962 (HIF3A)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
141734962
NCBI-ProteinID:
XP_074423448
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Position
26:complement(1926643..1937900)
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AA seq
631 aa
AA seq
DB search
MDGRPGARSTPELRKERSRDAARCRRSRETEVFYQLAHTLPFARGVSAHLDKASIMRLTI
SYLRVHRLLAAGAWAAAAEEVDGCYLKALSGFVMVLSEAGDMIFLSENVNRLLGLSQLEL
IGHSVFDFVHPCDHEELQDVLSPRQAVPRRRGERSGRSFSLRMKSTLTGRGRCLNLKAAS
WKVLHCAGHMRSYAGAGGGDPPLRCLVLICEAIPHPGAIETPLGSGTVLTRHSMDMKFTY
CDDRIGEVAGYTPEELLGCSLYEYVHALDSDTLSRSVHTLLSKGQAVTSQYRFLAKRGGF
LWAQTQATVIANSRSAQPEGIVCLTFVLSRVEQRGVVLSLEQTQRRGEGRRLPPPAPGPD
TPDAILNLSLGVGGPRVLAFLRPAHVPEAVLQRDPRRFCSPELARLLAPIFDPPPAPSRR
RPHSPSPPPGDELLFEVQKLFAGSPGPRTTLQASPLDLAMLAPYIPMDGDFQLGGAEAPR
GRGPRPPGPAPSAAAPPPRPRARSFPGRGSAPSRPGPALPRWGSDPALGPALAPRPTRKR
ARELSGEDAGAPLKRPELDPHLLPPLGLGLLLSGEDPPGLSPSLGQEQPLALLADGLALP
GVPPHPTLGPPQEETEGHPGGPPRGACLGSN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcggcccggggcgaggtcgacgccggagctgcggaaggagcgctcgcgggac
gcggcccgttgccggcgcagccgggagaccgaggtcttctaccagctggcgcacaccctg
cccttcgcccgcggcgtcagcgcccacctggacaaggcctccatcatgcgcctcaccatc
agctacctgcgcgtccaccgcctcctcgctgctggtgcctgggcggcggcggcggaggag
gtggatgggtgctacctgaaggcgctgagcgggttcgtgatggtgctgagcgaggcgggc
gacatgatcttcctctccgagaacgtcaaccggctcctggggctcagccagctggagctg
atcggccacagcgtctttgacttcgtgcacccctgtgaccacgaggagctgcaggacgtg
ctcagcccccggcaggcggtgccgcggcggcggggggagcgctcagggcgcagcttctcc
ctgcggatgaagagcaccctgacggggcgcgggcgctgcctcaacctcaaggcagcctcc
tggaaggtgctgcactgcgcgggccacatgcggtcgtacgcgggggccggggggggcgac
ccccctctgcgctgcctggtgctgatctgcgaggccatcccccacccgggggccattgag
acccccctgggctccggcaccgtcctcacccgccactccatggacatgaagttcacctac
tgtgacgacaggatcggggaggtggcggggtacacccccgaggagctgctcggctgctcc
ctctacgagtacgtccatgccctcgactccgacaccctcagcaggagcgtgcacaccctg
ctgagcaagggccaggcggtgacgagccagtaccggttcctggccaagcgcggggggttc
ctgtgggcgcagacccaggccaccgtcatcgccaacagccgcagcgcccagcccgagggc
atcgtctgcctcaccttcgtcctcagccgtgtggagcagcggggggtggtgctgtcgctg
gagcagacccaacgccggggggaagggcgccgcctgcccccccccgcccccggccccgac
acccccgatgccatcctcaacctcagcctcggggtagggggcccgcgggtgctggctttc
ctgcgcccggcccatgtccccgaggcggtgctgcagcgggacccccggcgcttctgctcc
cccgaactcgcccgtctcctcgcccccatcttcgacccccccccagcaccctcccgccgc
cgcccccacagcccctccccgccccccggggacgagctgctgttcgaggtgcagaagctt
ttcgcggggagcccggggccccgaacgaccctgcaggcgtcgcccctggacctggccatg
cttgccccctacatccccatggacggcgacttccagctgggcggggccgaggcgccgcgt
gggcggggcccgcgcccacccggccccgccccctcggccgcggccccgccccctcggccg
cgcgcccgcagcttccccgggcgcggctccgccccctcccggcccggccccgccctcccg
cgctggggcagcgaccccgccctcggccccgccctggcgccccgccccaccaggaagagg
gcacgggagctgagcggggaggacgcgggggcccccctgaagcgccccgagctcgacccc
cacctgctgccccccctcggcctggggctgctgctgagtggggaggaccccccgggactg
agcccctccctggggcaggagcagcctctcgcgctgctggctgatggcctggccctgccg
ggggtccccccgcaccccaccctggggcccccccaggaggagaccgaggggcacccagga
ggacccccccggggtgcatgtctggggagcaactga
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