Larus michahellis (yellow-legged gull): 141734978
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Entry
141734978 CDS
T11135
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141734978 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141734978 (EXOSC5)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
141734978 (EXOSC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
141734978
NCBI-ProteinID:
XP_074423485
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All DBs
Position
26:complement(2633960..2637454)
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AA seq
232 aa
AA seq
DB search
MAAAEEEDEGGKMAAAAAAGGGCCLRPFSCEQGLLSRPDGSAAFLQGDTSVLAGLYGPAE
VKGSKELPDRAALEVLLRPKVGLPGVLERSREQQLRGSCEGVLLGVLHPRTAVTLVLQVL
SDAGSLLSCCLNAACLGLLDAGLPLSSLFCGVTCALRPDGAIVLDPTTRQEQEARAVLTF
AIASVERKVLMATTKGSCSVEEMQQCLAAAQRAADTIFQFYRDSVRRKYSKS
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggaggaggaggatgaaggagggaagatggcggcggcggcggcggcgggc
ggcgggtgctgcttgcggcccttctcctgcgagcaggggctgctgtcgcgacccgacggc
tcggccgccttcctgcagggcgacacctcggtgctggccgggctctacgggccggcggag
gtgaagggcagtaaggagctgcccgaccgggcggcgctggaggtgctgctgcgccccaag
gtggggctaccgggggtgctggagcgcagccgggagcagcagctgcgggggagctgcgag
ggggtgctgctgggggtgctgcacccccgcaccgccgtcaccctggtgctgcaggtgctg
agcgacgccggctccctgctctcctgctgcctgaacgccgcctgcctggggctgctggac
gcggggctgcccctctcctccctcttctgcggcgtcacctgcgccctgcgccccgacggc
gccatcgtcctcgaccccaccacccgccaggagcaggaggcccgcgccgtcctcaccttc
gccatcgccagcgtcgagaggaaggtgctgatggccaccaccaagggcagctgctccgtg
gaggagatgcagcagtgcctggcggcggcccagcgcgccgccgacaccatcttccagttc
taccgcgattccgtccggcggaaatactccaaatcctga
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