KEGG   Larus michahellis (yellow-legged gull): 141735806
Entry
141735806         CDS       T11135                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
  KO
K10570  DNA excision repair protein ERCC-8
Organism
lmic  Larus michahellis (yellow-legged gull)
Pathway
lmic03420  Nucleotide excision repair
lmic04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lmic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    141735806 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    141735806 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lmic04121]
    141735806 (ERCC8)
   03400 DNA repair and recombination proteins [BR:lmic03400]
    141735806 (ERCC8)
Ubiquitin system [BR:lmic04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     141735806 (ERCC8)
DNA repair and recombination proteins [BR:lmic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      141735806 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD_LRWD1 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_RIG_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 141735806
NCBI-ProteinID: XP_074425147
LinkDB
Position
Z:complement(22031760..22062510)
AA seq 430 aa
MLGFISARQAGLDDPVRLRRAESTRRVLSLELNKDRDVERIHGSGINTLDIEPVEGRYML
SGGSDGVIVLYDLENLSRKPNYTCRALCSVGRSHPDVHRFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNTLQPADVFHFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSCSH
ILQGHRQEVLAVSWSPRHEYILATASADSRVKLWDVRRASGCLSTLDQHNGEKSKAASEA
ASTAHNGRVNGLCYTNDGLHLLTIGTDDRMRLWNSSTGENTLVNYGKVCNESRKGLKFTV
SWGCNPEFAFVPYGSTIAVYTIFTGELITMLRGHYSTVNCCVLQPNFQGCALIEDHDVRG
ISVAYVSSEKSLVMFLGQAFLYWVVPSTIHFVSHRLKRRRLSFSEIPKTNHRKKECGVHL
GGVPWYCYQY
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgctggggttcatttcggctcgtcaggccgggctcgacgatccagtgcggctgcgccgg
gccgagtccacgcggagggttctaagtttggagctaaataaagatagagatgtggaaaga
atacatgggagtggtatcaacacccttgatattgagcctgttgagggaagatacatgtta
tccggtggatcagatggtgttattgtactctacgacctcgaaaacttgagcagaaaacca
aattacacgtgtagagcactttgctctgtgggaaggagccatcctgatgtacatagattc
agtgtggagacagtccagtggtatcctcatgacactggcatgtttacatccagctcattt
gataaaaccttgaaaatatgggatacaaatactttacagcctgcagatgtatttcacttt
gagggaacagtgtatagccatcacatgtctccagttgctacaaagcattgtttaatagca
gttggtaccaaaagccccaaagtacagctctgtgacttgaagtctggatcctgttctcac
attctgcagggtcatcggcaagaggtacttgcagtgtcttggtcaccacgtcatgagtat
attttggcaacagcaagtgctgatagtagagtaaaattatgggatgtgaggagagcatct
ggatgtctgagtacacttgaccagcacaatggagaaaaatccaaagctgcttctgaggca
gcaagtactgctcacaatgggagagttaatggtttatgctatacaaatgatggacttcat
ctgttgaccattggtacagatgatcggatgcgactttggaacagctctactggcgaaaac
acgttagtgaattatgggaaagtctgtaatgaaagtagaaaaggactcaaattcaccgtc
tcctggggctgtaatccagagtttgcctttgtaccatatggtagtaccattgctgtttac
acaattttcacaggagagctgataacaatgcttagggggcattatagtactgtcaactgc
tgtgtacttcaacctaattttcagggatgtgctttgatcgaagatcatgacgtaagaggg
atttctgtagcctatgtgtcaagtgagaaaagtttggtcatgttcttgggacaggccttt
ctatattgggttgttccttccacgattcatttcgtgtcacatagactgaagaggaggcgt
ttgtctttctctgagatacctaagacaaatcacaggaagaaagaatgtggagtgcattta
ggtggagtgccttggtattgctatcagtactga

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