Larus michahellis (yellow-legged gull): 141735811
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Entry
141735811 CDS
T11135
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
141735811 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmic04131
]
141735811 (SPATA13)
Membrane trafficking [BR:
lmic04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
141735811 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
141735811
NCBI-ProteinID:
XP_074425173
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All DBs
Position
1:201027637..201214476
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AA seq
1355 aa
AA seq
DB search
MLAIPCGATLSAKDTDHSSSMKAVSAPNLAAQPEELSSPGRCKSKTNGGAADEGEAARSA
GGDSSVAVSYPSLRLHAYSIESMTTFPNGCGNGTTVTCIVMDNKEPQNQTTCVSHNGGYS
TSNSHEEEIQEDKLSPSKIMRFFTTPRKRANSSSDRPRSLVLMGNSSTWNALSSIRKMGS
FKKLKSSVLQGIQTRECSDILNENGVGKQGSKGAVVRVQTNRYSYSGPLHDFQNAVDGLA
SDCSDAEDGDESFLRNTHRSRSIRRAYGAGRINLLDTDKVQSHHNCTRPTSPVIAEPKIC
EILVKDSENNRIIYRRSKSSDNLNFLKKSSFKRKSTSNLTDLKVGNEKQMPTRTVSVTSA
DSDKTGGNPERRSKRWKSPIRAKDFDRVLKLVSNVTDVAWKKDGPKSTAPSPSEQSQRTR
SNSRLHDDYSRRVSSSTDHDRKRCTSPVSSPDSSLPGTPCLQSPAVAQDKEAETNVAVAE
DKSLRTSSGIPDSDSLSPTLNDISPFPNEVFYSDSDEPKATQQFTHEAENPHVPVRPTTP
KPQSPTAEKVKCNMNFQCPDHHSTLSLSSSESEERVEVAGPKLGRNPVCFQDSVQTVYYD
DGNEDSGISSHSQLSLNLASGAEEKKEEVVSDDHWKRSPSQDEEKTDTQKVAPRRWGSGK
RSRPRPLSDYGQMSIRSFSIPEDAVVVESQKTDCTDGENQPGLASVGSVIQSNTVGYHRG
RKRRPISVIGGVNFYGNGPAEEIEGLLTQPATRPPVPAHQVPPYKAVSARFRPLTFSQST
PIGLDRVGRRRQMRTSNVAADGGTESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLA
INELISDGSIVYAEALWDHVTMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPAS
FVRLRVNQEEVPENCSSIQDEEQDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHL
KDICEGYIRQCRKHTGMFTAAQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGS
CFLQHQEGFAIYSEYCNNHPSACIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTP
VQKICKYPLQLAELLKYTTQEHSDYNNITAAYEAMKNVACLINERKRRLESIDKIARWQV
SIVDWEGPDVLARSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYK
DRIDMDEMEIVDTEDGRDKDFNMNVKNAFKIINRATEEIHLFCAKKQEDKKRWMEACESE
RRRVQEDKEMGMEISENQKKQAMQNARKSRHGKIKGVSYNGCPVPPPHQSLHPIHQRHIT
VPTSIPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgttggctattccctgtggtgcaacattgtctgcaaaagacactgatcacagttcctcc
atgaaagccgtcagtgctcctaacttggcagcgcagcctgaggagctgagctcacccggt
cgatgcaaaagcaagacaaacggaggtgcagcagatgaaggagaggcagcgaggtcagct
ggtggggacagcagcgtcgctgtgagctaccccagcctccgtctccatgcctacagcatc
gagagcatgacaacgtttcccaatggctgtggaaatggcaccaccgttacttgtatagtt
atggataataaagagccccaaaaccagactacctgtgtcagtcataatgggggatatagc
accagcaacagtcacgaggaggaaatccaagaggataagctcagcccttccaaaatcatg
cgctttttcaccacccctcgtaaacgggctaattccagctctgacaggcctcgttctctg
gttttgatgggtaactcgtccacctggaatgctttgtcttccatcagaaaaatgggatct
ttcaagaagttgaaatcttcagttctccaaggaattcaaacaagggaatgctcagacatc
ttaaatgagaacggcgtaggcaaacagggttcaaagggggcagtggtgagagttcagact
aacaggtattcctattcggggcctctacatgacttccagaacgcagtggatggtttagct
tctgactgctccgatgcagaggacggcgacgagtctttcctgaggaatacccatcgctca
cgcagcatcaggcgggcttacggtgctggccgcataaacttgctagacacggataaagtt
cagagtcatcacaactgtactaggccaacatcacctgtcattgcagagccaaagatctgt
gaaattttggtgaaagactctgaaaacaacaggatcatttatcggagaagcaaaagttcg
gataatttgaactttctgaaaaaaagctcattcaagcggaagtccacctcgaacctcacc
gacctcaaggttggaaatgaaaaacagatgccaacaaggactgtgagtgttacttctgct
gactcggacaaaaccggtgggaaccccgagaggagatccaagcgatggaagagccctatc
agggcaaaggattttgaccgagttttgaaactcgtcagtaatgttacagatgttgcgtgg
aagaaggatggcccgaagagcacggctccttctcccagcgagcagtcccagagaacaagg
tcaaacagcagactgcacgatgactactcccgcagggtttccagcagcacggatcatgac
agaaagcgatgcacctccccagtatctagtccagactcttccttgccgggaacaccttgt
ctgcaaagccccgctgttgctcaggataaagaggctgaaacgaatgtagctgttgctgaa
gacaaaagcctcaggacgtcatcaggtatcccggactctgatagcttatcacccaccctc
aatgacattagtccatttcccaatgaagtgttttattcggactcggatgaaccaaaagct
acccagcagtttacacatgaagctgaaaaccctcacgttccagtcaggccgactactcca
aagcctcagagtcccaccgcagagaaggtcaagtgcaatatgaatttccagtgcccagac
catcacagcacgttgtcactgagctcatcggagagcgaggagagagtagaggtagcgggg
ccgaagctgggcaggaatcctgtttgcttccaagactcggtgcagactgtgtactacgat
gatggaaacgaagacagtggcataagcagccactctcagctgagtctcaatttagcctct
ggtgctgaagagaaaaaggaagaggttgtttctgatgaccactggaagaggtccccatcc
caggatgaagaaaagacagacacacaaaaggttgcacccaggagatggggctctggaaaa
agatctcgtcccagacctctttcagactatggccaaatgtccatcagaagtttctctata
ccagaagatgcagttgtggtggagtctcagaagacagactgcacggatggagaaaatcag
ccaggactggcttccgtcgggtctgtgatccaaagcaatacagtaggctaccacagagga
cgaaaaagaagacccatctccgtaataggtggggtcaatttctatggaaacggtccggca
gaagagatagaaggtctgctgacacaacctgcaacgcggccacccgtcccagcgcaccag
gtccccccttacaaagccgtttcggccaggttccggccgctcaccttttcacaaagtacc
cccatcggcctggaccgggttggacgaaggcggcagatgagaacatctaatgttgctgca
gatggtgggaccgagtcttcggccttagtggacgacaatggcagcgaggaagactacagt
tacgaggagctgtgccaagccactcccaggtacctgcagcccggaggggaacagctagca
attaatgagctgataagcgatggcagcattgtctatgcagaggctctctgggaccacgtg
actatggatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagct
tccaacaaagactggtggtggggaagaaatgaggacaaggaagcctggtttccagctagc
ttcgtcaggctgcgagttaatcaggaagaagtgccagagaattgtagtagtatccaggat
gaagaacaagatgcagatattagcaagcatcgtcagaaaatagctgaaaacaaggatcag
atgagaaccaacgttatacaggaaattatgaacacagaacgagtctatatcaagcacctc
aaggacatctgtgagggttatattcggcagtgtcgcaaacatacaggaatgttcaccgca
gctcagttaagcaccatttttggaaatattgaagatatttacaagttccaaaggaagttt
ctgaaggatcttgagaaacagtacaacaaagaagaacctcatctaagtgaaatagggtca
tgttttcttcaacatcaagaaggctttgctatttattcagagtactgtaacaatcatccc
agtgcctgcattgaactttcaaaactgatgaaacagggcaaataccgtcacttctttgag
gcctgtcgcttgcttcagcagatgattgacattgccattgacggttttcttctcacgccc
gttcagaaaatctgcaagtaccctctgcagctcgcagaattgctcaaatacaccactcag
gagcacagcgattataacaacataacagctgcatatgaggctatgaagaacgtagcgtgc
ctgatcaatgagcgaaaacgaagactagaaagcatagacaagattgcacgttggcaagtc
tctatcgtagactgggagggaccagatgtgttagccagaagctcagaactgatccactca
ggagaactgaccaaaatatcaaagcaaggcaaaagccagcagaggactttcttccttttt
gaccatcagcttgtgttctgtaagaaggacttactgagaagggacatcttgtattataag
gatcgtattgacatggatgagatggaaattgtggacactgaagatggcagagacaaagac
tttaacatgaatgtcaagaatgcttttaagataataaacagagcaacagaagagattcat
ttgttctgtgcaaaaaaacaagaggataaaaagagatggatggaggcgtgcgaaagtgaa
aggagaagagttcaggaagacaaggaaatgggaatggaaatctcagaaaaccagaagaaa
caagccatgcagaatgcccgtaaatcgaggcatggaaaaattaaaggtgtaagctataac
gggtgtcctgtgcctcctccacaccaaagcctgcatcctattcatcagcgccacatcact
gtgcctaccagcatcccgcagcagcaggttttcgccctggcagaacctaagcggaagcca
tccctcttctggcataccttcaacaaactcactccctttaaaaagtga
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