Larus michahellis (yellow-legged gull): 141735827
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Entry
141735827 CDS
T11135
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic02010
ABC transporters
lmic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
141735827 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141735827 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmic02000
]
141735827 (ABCA1)
Transporters [BR:
lmic02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
141735827 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
141735827
NCBI-ProteinID:
XP_074425216
LinkDB
All DBs
Position
Z:complement(55704757..55804949)
Genome browser
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDAKRLLLYSQQDT
SIKDVQKVLGKLRKFGNSSGSDLKLRDFLVDNETFSDFLHHNVSMPSSAVEELLDAEVNL
QQVIVSGYRMRLRDLCNSSTLSEFLTIHNQTAAMDSEVFICTLPKEKLHAAEQTFRANLN
PLKPLQRRFSFNSSLRDLSETVETLKESIGNLVKELLSMKSWSDMRQEVMFLNNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVTNFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMTEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPSSNWTVEDVARFLSNHQEDFETANG
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVATEVRLINKSLELLDERRFWAGIVFT
EIAPNSVELPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDV
VEQAIIRVQTGSEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLMSAGLLVLILKVGNLLPYSDPSVVF
VFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDYVSFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQERQQPHPDQKGSSEVCKEEEPMHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSAIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMAVDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTQRLLDALLNKPGFGTRCMQGHSIPDTPCTVGQMEWTTA
SVPDSVLDIFLKGNWSMENPSPSCECSNEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVIIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaacttcacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctacgagcagcatgaatgtcacttcccaaacaaagct
atgccttcggcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccct
tgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaatgcttcc
attgtttcccgcctgttctcagatgccaagaggttacttttgtacagtcaacaggacacg
agcataaaagatgtccagaaggtcttgggaaaactgcgcaagttcggaaactcctctggt
tcagacttgaaacttcgggatttcctggttgacaacgagacgttctcagacttcctccac
cataatgtgtccatgccatcatctgcagtagaggagctactggatgcagaggtcaacctc
cagcaggtcattgtgtctggttaccgaatgcgactgcgagatctctgcaatagctcaaca
ctgtctgaatttcttacaatccataatcagacggcggccatggactctgaagtctttatt
tgcaccttgccaaaggaaaaactccatgcagctgagcaaaccttccgtgctaacctgaat
cctttgaagcctcttcagagacgattttctttcaattcctccttgcgggatctgtccgaa
actgtggaaactttgaaagagagcattgggaatcttgttaaagagttgctaagcatgaag
agctggagcgacatgaggcaagaggtgatgttcctgaacaacgtgaatgcctcaaactcc
tctacacagatctaccaggctgtgtcgcgcattgtgtgcggccatcctgaaggtggagga
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactatttggaggc
aacagcactgaagacgatgtaactaatttctatgataactccacaacaccctactgcaat
gagctgatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaaa
ccgttgctgattgggaagatcttgtacactccagacacaccagctgtaaggaaggtcatg
actgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcggggggatgtgg
gaggagataagcccgaagatttggacgtttatggaaagtagtcaggaaatggatctcatt
cggacgctgctgaaaggcaaggctctatgggacctgcacttgccatcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaaccaccaggaggactttgagacagcaaacggc
tcagtgtatacctgggtggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacttggataaactggagcctgtggccacagaagttcggctt
ataaacaagtccttggagcttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatagctcctaacagtgtagagctccctcaacatgtgaaatacaagatacgcatggac
attgataacgtggaaaggacaaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtttggggaggctttgcctacctgcaggatgtg
gtggaacaggccatcatcagggtgcagacaggctcagagaagaagacaggagtttatgtg
cagcagatgccctacccatgttatgtggatgacatatttctgcgtgtcatgagtcgctcc
atgcctctcttcatgactctagcctggatctactctgtggctgtgataattaagggcatt
gtgtatgagaaggaagcccggctgaaggagacgatgaggattatgggacttgacaatggc
atcctttggctaagctggttcattagcagcctcatccctctcctgatgagtgcaggtctg
ctggtgctgatccttaaggtgggaaatctgctgccttacagtgaccctagtgtggtgttt
gttttcctgtcgatctttggtgttgtgaccatactccagtgcttcctcatcagcactgtg
ttctccagagccaacctggcagctgcctgtgggggcattgtctatttcacgctgtacctg
ccttatgtgctgtgtgttgcctggcaggactatgtcagcttctcactcaagatttttgcg
agcctgctgtctccagtagcctttggctttggttgtgagtacttcgcactgtttgaagag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatctgctgtcatgatgttgtttgacaccttcctatatggggtcatgacc
tggtacattgagtctgtcttcccaggtcagtacgggattcccaggccctggtactttcct
ttcacaaagtcctattggtttggcgaagaaccacaggagaggcagcagcctcatcctgac
cagaaagggtcttcagaagtctgcaaggaggaagagcctatgcatctgagccttggtgtt
tccatccagaacctggtcaaggtttatcgtgatggcaagaaagttgctgtagatggtctc
accctgaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccatcttgactggcttgtttcccccaacctcgggtacagccttcatc
ctgggcaaagatatccgctctgagctcagcgccatcaggcagaacctgggtgtctgtcca
caacacaatgtgctgtttgacttgctgactgtggaagagcacatctggttctatgctcgg
ctcaaagggctgccggaaaagaaggtgaaagaggagatggagcagatggcagtggatgtt
ggtttgccacacaaactgaaagcgaggacaagcaaactctctggtggcatgcagaggaag
ctttcagttgccttagcctttgttggtggctccaaggttgtcattctggatgagcctaca
gctggggtggatccctattctcgcagagggatatgggaattgcttctcaagtatcggcaa
ggccgcactatcattctctccacgcaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagcttggaacaggctattatttgaccctggtcaagaaggatgtggattcctctctgagc
tcctgccgaaacagcagcagcacagtgtcctatctgaaaaaggatgacagtgtctcccag
agcagctctgacgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtc
tctgcaatttcaaatctcattacaaaacatgttcctgaggccaggctggtggaggatatc
ggccatgaattaacctatgtcttgccatacaaggctgctaaagagggagctttcgtggag
ctgttccatgaaattgatgaccgtctctctgatcttggcatttccagctatggcatctct
gaaaccaccctggaggagatcttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatgggacattgccagccagaaggaacaggcgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgattcggacatagatcca
gcagaatccagagagacagacctcctcagcggcatggatgggaaaggctcctaccagatg
aagggctggaaactcacccagcagcagttcatggctctgttgtggaagaggctgcttatt
gccaagagaagccggaagggcttctttgctcagattgtactgccagctgtcttcgtgtgt
attgctctcatgttcagcctgatcgttcctccctttgggaagtatcccagcctggaatta
cagccctggatgtatgatgagcagtacacttttattagcaacgatgctccagaagatgca
ggcactcagaggcttttggacgcccttctcaataagcctggttttgggacacgctgcatg
cagggacactccatcccagacactccttgcaccgtggggcagatggagtggaccaccgct
tcagtcccagactcagtcctggacatcttcttgaaaggcaactggagcatggagaaccct
tccccgtcttgcgagtgcagcaatgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgcaggcgggctgccacccccacagcgcgagcaagacactgctgacatcctccagaat
ctgacaggccgcaacatatcggactatctggtgaagacatatgcacagatcattgggaaa
agcttaaagaataagatctgggtgaatgagttcaggtatggtggcttttccttgggagcc
agcagttctctcatgcttcctccaagccatgaagtcactgatgccattaaacaggtgaag
aagatcctggagctagcacaggggagttctggagatcggtttctgaacagcttgtcaagt
ttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggttcaacaacaagggctgg
catgccatcgcctccttcctgaatgtgatcaacaatgccattcttcgggctaacctgcag
cagggcaaaaaccctagtgcttatgggatcactgccttcaatcacccactcaacctcacc
aagcaacagctctctgaagtggctttgatgaccacctccgtggatgtcctagtctccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggtcttccttatccaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaaacctgtgatctactgg
ctggccaactttgtctgggatatgtgcaactacattgttccagccacgctagtcatcatc
atcttcatctgcttccagcagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccagcctcctttgtg
ttcaaaatccccagcacagcatatgttgtgctgaccagcgtgaacctcttcattggcatc
aatggtagcgtggccacctttgtcctggagctcttcaccaacaacaagctgaacaacatc
aatgacatcctgaagtctgtcttcctcatcttcccccacttctgcctgggtcggggactc
attgacatggtgaaaaaccaggctatggctgatgctctggaaaggtttggagaaaaccgt
tttgtgtctcctctgtcatgggacctggtgggaaggaacctcttcgccatggcagtagag
ggcgttgtctttttcctcatcacagtgctcatccagtacagattcttcatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagaga
cagaggataattagtggaggaggacagagtgacatcttggaaatcaaggagctaaccaag
atttacagaatgaagcgaaagccagcagttgataggatctgtgttggaatcccccctgga
gagtgctttggactcctgggggtaaatggtgctggcaagtcatccacttttaagatgcta
actggtgatacagatgtgacaggaggagaagctttcctcaaaggaaacagtattttgtcc
aacatccaagaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgaa
ctgctgacagggcgagagcacttggagttcttcgcgcttctgagaggtgttccagagaaa
gaagtctgcaaggttggtgagtgggcaattcggaaactgggccttgtgaaatacggagaa
aaatatgctgggaattacagtggaggaaacaggcgcaagctctccacagccattgccctc
attggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagca
cgtcgtttcttgtggaactgtgctctgagtgtaatcaaagaggggagatcagtggtgctc
acatctcacagcatggaagaatgtgaagccttgtgtactcgaatggcgataatggtcaat
gggcgattcaggtgtctgggcagcgtccagcatctaaagaacaggtttggagatggttac
accatagtggtgagaattgcaggggcaaacccagacctgaagcctgttgaggagttcttt
gggcatgcgttccctggaagtgtcctgaaggaaaagcatcggaatatgctgcagtaccag
cttccctcttcaccatcctccctggccagaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtatttgtaaat
tttgctaaggaccaaagcgacgacgaccacactaaggacctgtcattgcacaaaaaccag
actgtggtagacattgcaatccttaattccttcctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
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integrated database retrieval system
