KEGG   Larus michahellis (yellow-legged gull): 141736235
Entry
141736235         CDS       T11135                                 
Symbol
SMU1
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
lmic  Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:lmic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lmic03041]
    141736235 (SMU1)
Spliceosome [BR:lmic03041]
 Complex B
  Other components
   Complex B specific factors
    141736235 (SMU1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_Gbeta Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_TEP1_C Ge1_WD40 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Beta-prop_Aladin Beta-prop_NUP159_NUP214 Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_RSE1_2nd DUF7165 TFIIIC_delta KNTC1_N VPS8_N Beta-prop_NOL10_N PROPPIN LisH LisH_PAC1
Other DBs
NCBI-GeneID: 141736235
NCBI-ProteinID: XP_074426230
LinkDB
Position
Z:71489908..71503909
AA seq 513 aa
MSIEIESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQD
GHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgatcgaaatcgagtcctccgacgtgatccggctgatcatgcagtacctgaaagag
aacagcctccaccgagccctcgccaccctccaggaggaaacgactgtgtccctcaacact
gtggacagtattgagagctttgtggccgacatcaacagcgggcattgggacacagtgctg
caagccatacagtcgctgaagctgcctgacaagaccctcattgatctctacgagcaggtt
gtgctggagttgattgagctccgggaactaggtgctgccaggtctctcctgaggcagaca
gatcccatgatcatgctaaagcaaactcagccagagcggtacatccaccttgaaaacctt
ctggccagatcttacttcgatcctcgtgaggcgtacccagatggaagtagcaaagagaag
cggagagctgctattgcacaagctttggctggagaagtcagcgtggtacctccatctcgt
cttatggctttgttggggcaggcactgaaatggcagcagcatcagggcttgcttcctcct
ggtatgacaattgacttgttccgaggcaaagcagctgtgaaagatgtagaagaagaaaag
ttccccacacagctgagcagacatattaagtttgggcagaagtcacatgtggagtgtgct
cggttttccccagatggacagtatctggtgactggctctgttgatggtttcattgaagta
tggaacttcactactggaaagattaggaaggatctgaagtaccaggcacaagataatttt
atgatgatggatgatgcagtgttgtgcatgtgcttcagcagagatacagaaatgctagca
actggagcacaagatggaaagatcaaggtgtggaaaatccagagtggtcagtgtctgaga
agatttgaacgagcacacagtaaaggtgttacatgcctcagtttctccaaagacagcagc
caaattcttagtgcttcttttgatcagacgatcaggattcatggtttaaaatctgggaaa
actttaaaggaattccgtggtcattcatccttcgtcaatgaagctacttttacccaggac
ggccactatattatcagtgcgtcctctgatggcacagtgaaggtttggaatgtgaagacg
acagagtgctcaaacaccttcaaatctcttggcagcactgctgggacagacattactgtg
aacagtgtcattctgctgcctaaaaacccagagcacttcgttgtttgcaacagatcgaat
acagtcgtcattatgaatatgcaaggacaaattgtaagaagttttagctctggtaagaga
gaaggtggtgactttgtctgctgtgcgctttcacctcgtggtgaatggatctactgcgtt
ggtgaagattttgtgctctattgctttagcacagtgaccggcaagctggagagaactctg
actgttcatgaaaaagatgtcattggcattgctcatcacccccaccagaacctgatcgcc
acttacagtgaagatggcctcctcaagctctggaagccatag

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