Larus michahellis (yellow-legged gull): 141736598
Help
Entry
141736598 CDS
T11135
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmic03021
]
141736598 (CHD1)
03036 Chromosome and associated proteins [BR:
lmic03036
]
141736598 (CHD1)
Transcription machinery [BR:
lmic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
141736598 (CHD1)
Chromosome and associated proteins [BR:
lmic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
141736598 (CHD1)
SLIK complex
141736598 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
141736598
NCBI-ProteinID:
XP_074427230
LinkDB
All DBs
Position
Z:complement(59118199..59176524)
Genome browser
AA seq
1812 aa
AA seq
DB search
MNGHSDEESIRNSSAESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGT
QSESESDTSREKKQIQAKPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQKAASSDSGSE
EDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDGEKSSCEESESDY
EPKNKVKSRKPPTRIKSKSGKKGAVLKKRQLDSSEDEEEEEEDDDDDYDKRGSRRQATVN
ISYKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRVGRKGATGAATTIYAVEA
DGDPNAGFEKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQET
KRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYS
ECSWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESL
ELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL
STLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKD
KSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMS
ALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEA
LQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIK
GELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTILHTGSTPSSSTP
FNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQF
KVANFSNMDEDDIELEPERNSRNWEEIIPELQRRRIEEEERQKELEEIYMLPRMRNCAKQ
ISFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYK
KFGGPLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKG
PTFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDS
NLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLAR
KEAQRLAGAGNSKRRKARTKKNKVTKAAKIKEEIKSDSSPQPSEKSDEDDDEDNKDEIVS
VKQPHKKIKAEKENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKD
IKEKRENKVKESTQKEKEVKEEKVNEIKSENKEKTKKMPLLDTPVHITATSEPVPILEES
EELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYT
NPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQQNDQNISSNVNTHVIRN
PDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKD
HRDWDHYKQDSRYYSDSKHRKLDDYRSRDHRSNLEGSLKDSRAHSDHRSHSDHRIHSDHR
SSSEYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHK
STPEHTWSSRKT
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagcataagaaacagtagtgcagagtcaagccaatca
gatgatgattccgggtcagcatcaggttctggatctggttcaagctctggaagcagtagt
gacggaagcagcagccagtcaggcagcagtgactctgactctggttcagagtcaggcact
cagtcagaatcagagtctgacacgtctagagagaagaaacaaattcaagcgaaaccgcca
aaagttgatggatccgagttttggaagtctagtccaagtatacttgctgtgcaaagatca
gcagtgctaaagaagcaacagcaacaacaaaaggcagcctcatcagacagtggctcagaa
gaggactcatcaagtagtgaagattctgcagatgactcatccagtgaaaccaagaagaaa
aaacataaagatgaagactggcaaatgtcgggatcagggtcagtatcgggaactggttcc
gactctgaatcagaggaagatggggagaaaagcagttgcgaagagagcgaatctgactat
gagccaaaaaacaaggttaaaagccgtaaacctccaaccagaattaagtcaaaaagtggg
aaaaagggtgcagtactgaaaaagaggcagcttgattcatcagaggatgaggaagaggag
gaggaggatgatgatgatgattatgataagagaggatctcgtcgccaggcaacggtcaac
attagttacaaagaagctgaagaaaccaagacagattctgatgatctgcttgaagtttgt
ggagaagatgtcccacaacctgaagaagatgaatttgaaactatagagaagttcatggat
agtcgagttggccgaaaaggagccacgggtgctgcaaccaccatctatgcagttgaggca
gatggtgacccaaatgctgggtttgaaaagtcaaaggagccaggagaaatacaatatctt
attaaatggaaaggttggtcacacatccataacacttgggaaactgaggaaacgctcaag
caacaaaatgttaaaggaatgaagaaactggacaactataagaaaaaggatcaggaaaca
aaacgatggctgaaaaatgcttctccagaagatgtggaatattacaactgccagcaggag
cttacagatgatctgcataaacagtaccagatagtggaaagaataattgctcattcaaat
cagaaatcagcggctggttatccagactactactgtaagtggcagggtctgccttattca
gaatgtagctgggaagatggtgcgctcattgccaaaaagtttcaggcacgcattgacgag
tactttagcagaaatcaatccaagaccactccctttaaggactgcaaggttttaaagcag
aggccaaggtttgttgcactaaagaaacaaccatcatacattggaggacatgaaagttta
gagttaagagattatcagctaaatggattgaattggcttgctcactcctggtgcaaaggg
aatagctgtattcttgcagatgaaatgggcctgggtaaaacaatacaaacaatttctttt
ctgaactacctgtttcacgaacatcaattgtatggccctttcttgctggttgtgccactt
tctaccttgacatcttggcaaagagagattcaaacttgggctcctcagatgaatgctgta
gtttacttaggagatataactagcagaaatatgataagaactcatgaatggatgcatcca
cagaccaaacgattaaaatttaacatacttctaacaacatacgaaattttgctgaaggat
aagtcattccttggtggtctgaattgggcattcataggagttgacgaagctcatcgttta
aaaaatgatgactctcttctgtacaagactttaattgactttaagtctaaccatcgtctt
cttattactggaacgcctctgcaaaactccctcaaagagctttggtctttgttgcacttc
atcatgccagaaaagttttcctcctgggaagattttgaagaggagcatggcaaagggaga
gagtatggttatgcaagtcttcacaaagaacttgaaccgtttctactgagaagagttaaa
aaagatgtagaaaagtctttacctgctaaagttgagcaaattctgagaatggaaatgagt
gcattgcagaagcaatattataagtggattttaaccaggaattataaagccctcagtaaa
ggttcaaaaggcagtacctcaggctttttgaacataatgatggaactcaagaagtgttgt
aaccattgctacctcattaaaccaccagatgataatgaattctataataaacaggaggcc
ttacagcatttaatacgtagcagcgggaaactaatccttcttgacaagctactgattcgt
ctgcgagaacgtggcaacagagttctgattttctcacagatggtgaggatgctggacatc
ctcgcagaatatctgaagtatcgtcagtttccctttcagagacttgatggatcaataaaa
ggagaattgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttctgc
tttttactgtctaccagagctgggggattaggcatcaacttggcatctgctgacactgta
gttatatttgattctgactggaatccacagaatgatctacaagcacaggctagagcgcat
aggattggacagaagaaacaggttaatatttatcgactcgtcacaaaaggatccgtagaa
gaagatattcttgaaagagccaagaaaaagatggtgttagatcatttagtaattcagaga
atggacactacagggaaaaccatactacatacaggctctactccttcaagctcaacacct
tttaataaggaggagttatcagcaattttaaagtttggtgctgaggaactttttaaagaa
cctgaaggggaagaacaagagccgcaggaaatggatatagatgaaatcttgaagagggca
gaaactcgggaaaatgagccaggtccattaactgtaggagatgagttgctttcacagttc
aaggtggccaacttttccaacatggatgaagatgatattgagttggaaccagaaagaaat
tcaagaaattgggaagaaataattccggaactccagcggcgtagaatagaagaggaggaa
agacaaaaagaacttgaagaaatatatatgctcccaaggatgaggaactgtgcaaaacag
atcagctttaatggaagtgaagggaggcgcagtaggagcagaagatactctgggtctgat
agtgactccatctcagaaagaaaacggccgaaaaaacgtggaagaccacgaactattcct
cgagaaaatattaaaggatttagtgatgcagagatcaggcggtttatcaagagttacaag
aaatttggtggccctcttgaaaggttagatgctgtagctagagatgctgagctagttgat
aaatcagagacagatctcagacgtttgggagagcttgtacataatggatgcattaaagct
ttaaaggacaattcatctggacaagaaagagcaggaggtagacttgggaaagttaaaggc
ccaacattccgaatctcaggagtgcaggtgaatgcaaagctagtcatctctcatgaagaa
gagttggcaccattgcacaaatccattccttcagatccagaagaaagaaaaagatacgtc
atcccatgccacaccaaggctgctcattttgatatagactggggtaaggaagatgattcc
aatctgttaataggcatctatgaatatggttatggcagctgggaaatgataaaaatggat
cctgatctcagtttgacacagaagattttgcctgatgatccagataagaaaccccaggcg
aagcagttacaaactcgtgcagactacctcattaaattactgaataaagaccttgcaagg
aaggaagcacaaaggcttgctggtgcaggcaactcaaagaggaggaaagcaagaactaag
aagaataaagtgacaaaggctgcaaaaataaaagaagaaataaaaagtgattcttcaccg
caaccctcagaaaaatctgatgaagatgatgatgaggataacaaggatgagattgtttca
gtgaaacaaccacataaaaaaattaaagcagaaaaagaaaatgaagaaaagcctgagcca
gatattggtataaagaaggaagctgaagaaaaaagagagacaaaagaaaaggaaaataag
agggatttgaaaagggagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagat
attaaagaaaagagagaaaacaaagtaaaagaatccacacagaaagaaaaagaagtaaag
gaagagaaggtaaatgaaatcaaatctgaaaataaagaaaaaactaaaaaaatgccattg
ttggatactccagttcatattactgcaaccagtgaaccagttcctatattggaagaatca
gaagaactggatcagaaaacttttagcgtgtgcaaggaaagaatgaggcctgtcaaagca
gcattgaaacagctggaccgaccagagaagggcctttctgaaagagagcagctggaacat
actagacagtgtcttatcaaaattggggatcacattactgaatgtctaaaggagtacaca
aatcctgaacaaattaaacagtggagaaaaaacttgtggatttttgtctctaagtttaca
gaatttgatgccagaaagctgcacaaactgtataaacatgcaatcaaaaaacgccaagaa
tctcagcaacaaaatgaccagaatattagcagcaatgtgaatacacacgtaattagaaat
ccagatgtggaaaggctgaaggagaatacaaaccatgatgacagtagcagggacagttat
tcttctgatagacatttgtcacaataccacgatcatcataaagacaggcatcagggagat
gcttacaagaaaagtgactctaggaaaaggccctattcagccttcagcaatggaaaagat
cacagagactgggatcactacaaacaagacagcagatactacagtgacagtaaacataga
aagttagatgactacaggagcagagaccacaggtcaaacctggaaggaagtttaaaagac
agccgggctcattcagaccaccgttcccattcagaccacaggatacattcagatcatcgt
tcctcttcagagtacagccatcataaatcttctagggattataggtaccactcagactgg
caaatggaccacagagcttcaggtagtggcccaaggtcaccattagatcagaggtctcct
tatggttcaagatctcccttaggacacagatctccatttgaacactcatcagatcacaaa
agtacacctgaacatacatggagtagccggaaaacataa
DBGET
integrated database retrieval system
