Larus michahellis (yellow-legged gull): 141738420
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Entry
141738420 CDS
T11135
Name
(RefSeq) transcription factor SOX-17-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141738420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmic03000
]
141738420
Transcription factors [BR:
lmic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141738420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
141738420
NCBI-ProteinID:
XP_074429720
LinkDB
All DBs
Position
2:126651229..126653491
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AA seq
408 aa
AA seq
DB search
MSSPDAGYASSDDQAQGRCSLPIMMPAVGPCPWAESLSPLGEAKAKGEAAPSGAAGGRSK
SEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLSEKRPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRLKRVESGFLQHGLAEAAGPGLGSEAGGGGGGRMCVE
GLGLPYAEQGYAAAGAGHYRDCPPLGAGFDGYSLPTPDPSPLDAAESEAPFFAAGLQEEC
SLVPYGYAPHPAAEYPPAAAAAASESPAGAALRRHLPPGEALVPGGSLQGLLGCPAPLHA
YYGQACQPPGPGRGPPPLPPGAVGQPSPPPEAAPCREQLEHLPQEELLGEVDRTEFEQYL
RFACKPELGLPFAGHEASGLAAPEGAGPISSAVSDASTAVYYCGYPDV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctatgccagcagcgacgaccaggcgcaggggcggtgctcg
ctgcccatcatgatgccggccgtgggtccctgcccctgggcagagtcgctgagcccgctg
ggcgaggcgaaggcgaagggcgaggcggcgccgtcgggggcggcgggcggccggagcaag
agcgaggcgcggatccggaggcccatgaacgccttcatggtgtgggcgaaggacgagcgc
aagcggctggcgcagcagaacccggacctgcacaacgccgagctcagcaagatgctgggt
aaatcgtggaaggcgctgtcgctgtcggagaagcgtccgttcgtggaggaggcggagcgg
ctgcgggtgcagcacatgcaggaccaccccaactacaagtaccggccgcggcggcggaag
caggtgaagcgcctgaagcgggtggagagcggcttcctgcagcacggcctggcggaggcg
gcggggcccgggctgggcagcgaggccggcggcggcggcggcggcaggatgtgcgtggag
ggcctgggcctgccctacgcggagcagggctacgcggcggcgggcgcgggccactaccgg
gactgtccgccgctgggcgccgggttcgacggctacagcctgccgacgccggacccgtcg
ccgctggacgcggcggagagcgaggcgccgttcttcgcggcggggctgcaggaggagtgc
tcgctggtgccctacggctacgccccgcacccggcggccgagtacccgccggcggcggcg
gcggcggcgtccgagagcccggcgggcgcggcgctgcggcggcacctgccgcccggcgag
gcgctggtcccgggcgggtcgctgcagggtctgctgggctgcccggcgccgctgcacgcc
tactacggtcaggcgtgccagccgccgggcccggggcgcgggccgccgccgctgccgccg
ggggcggtggggcagccgtcgccgccgcccgaggcggcgccgtgccgggagcagctggag
cacttgccgcaggaggagctgctgggcgaggtggaccgcaccgagttcgagcagtacctg
cgcttcgcctgcaagcccgagctggggctgcccttcgcgggccacgaggcgtccgggctg
gcggcgcccgagggcgcggggcccatctcctcggccgtgtcggacgccagcacggccgtc
tactactgcggctaccccgacgtgtga
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