Larus michahellis (yellow-legged gull): 141738930
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Entry
141738930 CDS
T11135
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141738930 (TRIM71)
04121 Ubiquitin system [BR:
lmic04121
]
141738930 (TRIM71)
Enzymes [BR:
lmic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141738930 (TRIM71)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141738930 (TRIM71)
Ubiquitin system [BR:
lmic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
141738930 (TRIM71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-B_box_Trim66
zf-C3HC4
CRLF3_N
zf-RING_UBOX
DUF4094
Motif
Other DBs
NCBI-GeneID:
141738930
NCBI-ProteinID:
XP_074431219
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All DBs
Position
2:complement(46234099..46289936)
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AA seq
885 aa
AA seq
DB search
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSSSSGGGGGGGGGSSCGGPPRR
LHVLPCLHAFCRQCLEAQRHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLL
DVVVVAAAAEEQKNGRAAGAGPAAGSAAGAGGGGGNNRHHGRPPPPHRAAGSSPAAAASA
APSSTTSSSSSSGGGSAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRA
HQRVRLTKDHFIERFAAAGPGPAGGPAAPLALSPPYTTASPYNILSVFPDRASYCQHHDD
EVLHFYCDTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSI
EQAQAVAEQVEMKAKVVQSEVKAVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEK
LRQNLNKLDNTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTP
PDQALYMAIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYDHDGEPRLSGGDM
ISAVVMGPDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVVVKSG
RSYIGIGLPGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGTFHHKF
GTLGSRPGQFDRPAGVACDVSRRIVVADKDNHRIQIFTFEGQFILKFGEKGTKNGQFNYP
WDVAVNAEGKILVSDTRNHRVQLFGPDGVFLNKYGFEGALWKHFDSPRGVTFNHEGHLVV
TDFNNHRLLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFES
NGSFLCKFGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttcccgagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctctcctccaactcctccacctcctcctcctcctcgcagacctccagc
tcctccggggggggcggcggcggtggcggcggctcctcctgcgggggcccgccgcggcgg
ctccacgtcctgccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcac
cccggcgcgggggacgccctcaagctgcgctgccccatctgcgaccagaaggtggtgatc
tcggagccctcgggcatggacgcgctgccctcctccaacttcctcctcagcaacctgctg
gacgtcgtcgtcgtggccgccgccgccgaggagcagaagaacggccgagccgccggggcc
ggccccgccgccggctccgctgcgggagcaggaggcggcggtggtaacaaccgccaccac
ggccgcccgccgccgcctcaccgcgccgccggctcctcgcccgccgccgccgcctcggcc
gcgccctcctcgacgacgtcgtcctcctcctcctcgggcggcggctcggcggcgctcctg
ctgcggcggccccacagccggcagggcgagccccgctgcagctcctgcgacgagggcaac
gccgccagctcccgctgcctcgactgccaggagcacctgtgcgacaactgcgtgcgggcg
caccagcgcgtccgcctcaccaaggaccacttcatcgagcgcttcgccgccgccggaccc
ggcccggctggcggccccgccgcgccgctcgccctcagcccgccctataccaccgcctcg
ccctacaacatcctctccgtcttccccgaccgggccagctactgccagcaccacgacgac
gaggtactgcatttctactgtgatacctgttctgtccccatatgtcgggaatgtaccatg
ggacgacatgtgggtcacagctttatctacctccaagatgccctccaagattccaggact
ctcaccattcagctcctggcagatgctcagcaaggacgacaggctattcaactgagtatt
gaacaggcccaggctgtggcagagcaggttgagatgaaggcgaaggtggtacagtctgaa
gttaaagcagtgactactagacataagaaagccttggaggagcgggagtgtgagctgctc
tggaaggtggaaaagattcgtcaagtcaaggctaagtcactctacttgcaagttgaaaag
ttacgtcagaacctaaataagctggacaacaccattagtgctgttcagcaggtcctggag
gagggtcgtaccatggatattcttctggctcgggaccgcatgctggctcaggtgcaggag
ctgaagaatgtgagaggccttctccagccacaggaagatgacaggatcatgttcactccc
cctgaccaggcattgtatatggccattaaatcaatgggctttgtcagcagtggggctttt
gctcctctgaccaaagccactggggaaggcctcaagcgtgcgctgcagggcaaagtggcc
tctttcacagtcataggttatgaccacgatggtgagcctcgcctttcaggtggtgacatg
atctctgcagtggtgatgggcccggatggaaacctttttggggcagacgtcagtgatcag
cagaatgggacctacctggtcagctaccgtccacaactagagggagagcacctggtatct
gtgatgatgtgcaaccaacacattgagaacagccccttcaaagttgtggtgaaatctggg
cgcagctacataggtattgggctgccaggactctcttttggcagcgagggagacagcgat
ggcaagctctgccgcccctggggggttagtgtagacaaagaaggctacatcattgttgct
gatcgcagtaataaccgcatccaggtgttcaaaccatgcgggaccttccatcacaagttt
ggcacactggggtcccggcctggccagttcgatcgccctgctggtgtggcctgtgacgtc
tcgcgtaggatcgtggtggctgacaaggacaatcatcgcatccagatcttcacgtttgag
gggcagttcatcctgaagtttggggagaaaggaacaaagaacgggcaattcaattaccca
tgggatgtggccgtcaatgcagagggcaagatcctggtctctgacacaaggaaccatcgc
gttcagctgtttgggcctgatggtgtgtttcttaacaagtatggcttcgaaggggcactc
tggaagcactttgattcccccagaggtgtgactttcaatcatgagggccacttggtcgtg
actgacttcaacaaccatcgccttctggtcatccatccagattgccagtcagcacgcttt
ctgggctcggaaggcaccgggaatggccagttcctgcgcccgcagggagtggcggtggat
caagaggggcgcatcatcgtggccgattccaggaaccaccgggtgcagatatttgagtca
aatggtagctttttatgcaagttcggcactcagggaagcggctttggtcagatggaccgt
ccttcaggtatagccgtcacccctgatggcatgattgttgtggtcgactttggaaacaat
cgaattctcgtcttctaa
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