Larus michahellis (yellow-legged gull): 141740263
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Entry
141740263 CDS
T11135
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lmic03037
]
141740263 (NPHP1)
Cilium and associated proteins [BR:
lmic03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
141740263 (NPHP1)
BRITE hierarchy
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GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
Trypan_PARP
NOA36
Motif
Other DBs
NCBI-GeneID:
141740263
NCBI-ProteinID:
XP_074434740
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Position
3:complement(13057028..13077462)
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AA seq
678 aa
AA seq
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MSGRRARGPLQRVQRRSRELQAQVEALRAESAAPAPGQRKALSQRCIQLKKLVDENTNAL
HDLKKADEPAPVGNYNQRKEEEEKLLLKLSQQLQKLVLVLDQDNVTTNYAVDEEHQKDPQ
TEDENEEEDESEDEESSEEEDSEEADDDEEDKLLDDPNVKECIAVGNFNAQQEGDLTFMK
GEVLLIHDKKADGWWVAENSKGERGLVPRTYLVVRNEEEENQEESGEHIEVVDETADGTE
IKKRKGSHWSAVRRAITENDKVEVLATIGAVPAGFRPSTLFQLLEEGNQFRASYFLQPEF
TPSQLAFKDLVWNSEKNTIYPRPTRVSLIVTLCSCKMIPLPGASIQVLSRHVRLCLFDGN
RVLSNIHTVRATWQPKNPQSWTFSPRVTGILPSLLDGDCFVRSNSLYSDVGILFELGITY
IRNSTGERGELSCGWAFLKLFTSDGIPVPSKMYELLLNGGTPYERGIEVDPSISRRGSGV
FHQFITLKKQPVLVVKLRSLSAQSKDILNLLPETLIGSMCCIHLLIFYRQILGDVLLKDR
ISMQSTDLICNPILATFPQLMDQPDLMDALRSAWADRERTLKRSEKRDGEFLKSLFVLVY
HDSVFPLLRSTLLPDYKWAEEEPEASRWKVIADFLKKSRENDGALQYLLSSENTHKPFDI
SELAYDFLGEVRENNPGV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcggcgggcgcggggcccgttgcagcgggtgcagcgccggagccgggagctg
caggcccaggtggaggcgctgcgggcggagagcgcggccccggcccccgggcagcggaag
gctctttcgcagagatgtatacagctgaagaaattggtggatgagaatacaaatgccctt
catgatttgaaaaaagctgatgagcccgcacctgtggggaattataatcagaggaaagaa
gaagaagaaaagctactgctaaaactctctcagcaactgcagaaacttgttcttgtcttg
gatcaggataatgtgactacgaattatgcagtggatgaggaacatcagaaagatcctcaa
acagaagatgaaaatgaagaagaggatgagagtgaagatgaagaaagtagtgaggaggaa
gacagtgaagaagcagatgatgatgaggaggataaattgttggatgatccaaatgttaaa
gaatgtattgcagttggaaattttaatgcccagcaggaaggggatctcacatttatgaaa
ggtgaagtcctactcatccatgacaagaaagcggatggctggtgggtagctgaaaactca
aaaggggagagaggcctcgttcctagaacctatcttgtggtccgtaatgaagaagaagaa
aaccaagaggaaagtggagaacacatagaagtggtggatgaaacagcagatggaactgaa
attaaaaaaagaaaaggctctcactggagtgctgtaagaagagctatcacagagaatgac
aaagtggaagtattggcaaccataggagcggttcctgcaggattccgtccatccacactt
ttccagctcttagaagaaggcaatcagtttcgagcaagttactttttgcagcctgaattt
actccatcgcagttggctttcaaagacttggtgtggaactcggaaaaaaatactatctat
cctagaccgactcgagtatccctgattgtaactttatgtagctgtaaaatgattcctctc
ccaggagccagtatacaggttctcagtagacatgttcgactctgtctgtttgatggcaat
cgcgtgctgagtaacattcacacagtgagagccacgtggcaacctaaaaatcctcaatcg
tggaccttttctccaagggtaacgggcattttacccagcttgctggatggtgactgtttt
gtcaggtccaactccctgtattcagacgttggtatattatttgaacttggcatcacttat
attcgcaattcaacaggtgaaagaggagagctaagctgtggctgggcatttctgaagctc
tttacttctgatggaatacctgttccttccaagatgtatgagctgctattaaatggtggt
actccctatgagagaggcattgaggttgacccatcgatatcaagaagaggtagtggtgtt
tttcatcagtttataacgctcaagaaacagcctgtgcttgtagtgaaactgaggtcttta
agtgcgcagtcaaaagacatcctgaatttgctaccagaaacgttaattggcagtatgtgc
tgcatccatctcttgatattttatcgacaaatacttggtgatgtgctcctgaaagacaga
ataagcatgcaaagtacagatttaatctgtaatcctattttagcaactttccctcaactc
atggatcaaccagacctgatggatgcacttcggagcgcttgggcagatagagaaagaacg
ttgaagagatctgagaagagagatggagaatttctgaagtctctgtttgtcctggtgtac
cacgactctgtcttccctctcctccggtccactctcctacccgactacaagtgggctgag
gaagagcctgaagcatctcgctggaaggtgattgctgacttcttgaaaaagagccgagag
aatgacggtgcgcttcagtatctgctgtcgtcagaaaacactcataagccctttgatatc
tcagagctggcttatgatttcttaggagaagtgagggaaaacaatcctggagtatga
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