Larus michahellis (yellow-legged gull): 141740420
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Entry
141740420 CDS
T11135
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lmic03012
]
141740420 (DHX57)
Enzymes [BR:
lmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141740420 (DHX57)
Translation factors [BR:
lmic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
141740420 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
DEAD
HA2_C
HA2_N
zf-CCCH_4
Torus
AAA_22
zf_CCCH_4
nSTAND3
zf-CCCH
UBA
zf-CCCH_2
AAA_19
NPHP3_N
AAA_14
NB-ARC
FtsK_SpoIIIE
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-GeneID:
141740420
NCBI-ProteinID:
XP_074435207
LinkDB
All DBs
Position
3:22813912..22835170
Genome browser
AA seq
1371 aa
AA seq
DB search
MSSAGRRRGKPNRGGGRGRGGGGRGRAGGRGGGSSGHSNKSQLGGNRKCSSKIWDNGDDF
CLFEEPRLESRSNAPARRGGQTKQRPEAKMPLQTIHMTSENQRRVKELLQELQAQELAPE
SEVAGCGEDDDEADYLDDEQCWSTDQEVSDIIPRSSAEPAEHRIVESEVSSFAVHKLSRY
GFDSERCRTVLRSCNGNIGASLEYLLLQCFTDKYGEKMQVSATAAEASQEECLEQRQEEA
FALRSIYGEKFVERIQNRVWTFSLELEYLANKFSKSKQKGGCTKDTAKQTSKEICKFYLQ
GGCRFGSKCRFGHEFPPNHPLKPARNPVDDAHLRANSDGPVYELEVRFPEENKYPLQAPL
VAFYSTDENLPLACRLHIAEFLFGKALIAAESHEPVVYTLVTCLEDESEISELLKNTHHK
YSVPPMSQLATPSVKLQTESTSGSNRISEASTVSEPQEEEVAAEEEEENEPEQVVVENES
YVHLKKKLSKKYDVQAKSLYNENVKICTQFRLKKSSRHFQSMLYERQKLPAWQERETILD
LLKSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPSRVANIICTQPRRISAISVAERVAK
ERTERIGHTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTE
ESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDV
IAMTRYVLEDSSPYRRKTKQESKQNGRHKRTAFEEVEEDLRRAGILEGTDTGVRDSDPDQ
KLTLKQLLTRYKGVNKTVLKTMSVMDLDKVNLELIEALLEWIVAGRHSYPPGAVLIFLPG
LAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIA
ETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSKANALQRKGRAGRVASGVCFHL
FSSHHYNHQLIKEQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSRLIEPPRTESLWAS
KLRLQDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSP
FVSPWDKREEANKKKLEFAVGNSDYLALLQAYKGWRLSIQEGSQASYNYCRENFLSGRVL
QEIASLKRQFTELLSDIGFVKEGLRARDIEKKWSQGGDGVLDATGEEANSNAENIKLISA
MLCAALYPNVVQVKKPESKYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRH
FESPYLVYHEKIKTSRVFIRDCSMVSVYPLILLGGGQVHMQLQKGEFVISLDDGWIRFVA
ASHQVAELVKELRCELDQLLQDKIKNPSMDLCMCPRGSRIIGMIVKLVTTQ
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagcagggaggagaagaggaaagcccaacagaggaggaggaagagggagagga
ggaggaggaagaggaagggcaggaggaagaggaggcggcagcagtggccattcaaacaaa
tctcaacttggtggaaataggaaatgttcaagcaaaatctgggacaatggagatgatttt
tgtctctttgaggaaccaaggctggaatccagatcaaacgcccctgccagaagaggaggg
caaacgaaacagagacccgaagcgaaaatgcctctgcagaccatacacatgacgtcagag
aatcagagaagagtgaaagaacttcttcaagagcttcaagcacaggagctggctcctgaa
tcagaagtagctggttgtggtgaagacgatgacgaagctgattaccttgatgatgaacaa
tgctggtcaacagatcaggaagtttctgacataataccaaggtcgtctgctgagccagct
gagcacagaattgtggaaagtgaagtgtcttcgtttgctgtgcacaaactctccaggtat
ggttttgacagcgagcgttgtaggacagtgctgagatcctgcaatggtaacattggggca
tccttggagtatttgctattgcagtgctttactgacaaatatggagagaagatgcaggtt
tctgcaacagctgctgaagccagtcaagaagaatgtttagaacagagacaagaagaggct
tttgccctccggtcaatctatggagaaaaatttgtagaaagaattcaaaatcgagtttgg
acttttagtttggaattggagtacctagcaaacaagttcagcaaatctaaacaaaagggt
ggttgtactaaggacacagcaaagcagacttcaaaggaaatatgtaaattttatctccaa
ggaggctgcaggtttggttcaaaatgcagattcggacatgagttccctccaaaccaccca
ctaaaaccagccaggaaccctgtcgatgatgctcatctcagagctaacagtgatggtcct
gtatatgaactcgaagtaagatttcctgaagaaaacaagtatccactccaggcacctctt
gtggcattttattccaccgatgagaatctacctcttgcttgtcgtttacacattgctgaa
ttcctctttggaaaggccttgatagctgcagagtctcatgaaccagtggtgtacacctta
gtgacttgcttagaagatgaatctgaaataagcgagttacttaaaaatactcaccacaag
tacagtgttcctcctatgtcccagttggcaacaccttcggtaaagctacagacagagagt
acgtctggttcaaatcgaatatccgaagcctcaacagtgtcagagcctcaggaagaagag
gtggcggcagaagaggaggaggaaaatgagcctgaacaagttgttgtggagaacgagagt
tatgtccacctcaagaaaaagctttccaaaaagtatgatgtgcaggcaaagtctctatat
aatgaaaatgttaaaatctgcacacaatttcggctgaaaaagtcttctaggcacttccag
tccatgttgtatgaaagacagaagctccctgcatggcaagagagagaaacaattcttgat
ttgctgaagagccaccaagttcttgttgtgagcggcatgacgggatgtgggaaaaccact
cagattcctcagtttattttggatgcttcattgcaaggatctccaagcagagttgcaaac
atcatctgcacccagcctcgcaggatctctgccatttctgtggctgaacgtgtagccaaa
gaaagaacagaaaggattggacacactgttggatatcagatccgtctagaaagtgtaaag
tcctcagctacccgactcttgtactgcactactggtgtgctgttgagaaggctggaagga
gatctgactttgcagggaatcacacatgttattgttgatgaagttcacgaaagaacagaa
gaaagtgacttcttgctgctggttttgaaggatataatggttcagaggccagacctgcgc
attatactaatgagtgccaccttgaatgcagagcttttttctcaatactttcactcctgt
ccaattattaacataccaggtcgaacatttcctgtggatcagttttttctggaagatgtg
attgcaatgacaaggtacgttttagaggacagtagtccctacaggcgcaagacaaagcaa
gaaagcaaacaaaatggaagacacaaaagaactgcatttgaagaagtagaggaggacttg
agacgtgctggcattttggaaggcaccgacacaggtgtcagagattcagatccagaccaa
aaattaactctgaagcagctgcttacacgatataaaggagttaacaagacagtgttgaaa
acaatgtctgtcatggacttggacaaagttaatctggaattaattgaagccttgctggag
tggatagttgctggcagacattcataccccccaggtgctgtgttgatatttttgcctggt
ctagcagaaatcaagatgctttatgagcagctccagtctaatgctctttttaacaacagg
cacagcaagaggtgtgtggtttatccccttcattcttcactgtctagtgaagaacagcag
tctgtgttcctcaggcctcctgcaggagttatcaaaatcatcatttctacaaacattgca
gaaacatctgtcaccattgatgatgtggtctatgtgattgattctggaaaaatgaaagag
aagaggtacgacccaagcaaaggaatggaaagtctggaagacacatttgtgtccaaggcc
aatgctctgcagaggaaagggcgagcaggccgtgtagcctcaggtgtctgctttcacctt
ttcagtagccatcactataaccatcagcttataaaagaacagttaccagaaatacaaaga
gtgcccttggagcagctttgtctaagaattaagattctggagatgttttctgcacagagt
cttcactctgtcttatcacgactaattgagccccctagaactgagtctttgtgggcatca
aagctgcgactgcaagacttaggagcattgactccagacgaaaagctcactcctctggga
tatcacttggcttcgctgcctgttgatgtcaggattggcaagctcatgctgtttggcacc
atcttccgctgcctggatcctgcactaactatagcagccagtctggcctttaaatcacct
tttgtgtcgccatgggataaaagggaggaagcaaacaaaaagaagctggagtttgcagta
gggaacagcgactacctggctcttctccaggcctataagggatggcgtttaagtatccaa
gagggttctcaggcaagctacaactactgcagggagaactttttgtcaggaagagttctt
caggaaattgccagcctcaaacggcaattcacggagctgctttctgacattgggtttgtg
aaagagggattaagagccagggacattgagaagaagtggtcccaaggaggcgatggcgtg
ttggatgccacaggagaagaggcaaattccaatgcggagaacatcaagctgatctcagct
atgttgtgtgctgcgctgtatcccaatgttgtccaggtgaaaaagccagagagcaaatac
cagaagaccagcacaggagcggtcaaaatgcaaccaaaagcagaagagctgaagtttgtt
accaaaaatgatggttatgttcacattcacccttcatctgtgaattatcagacgaggcac
tttgagagcccctacctggtatatcacgagaaaatcaagaccagccgcgtgttcattcgg
gactgcagcatggtgtcggtgtacccgctgatcctgctcggaggcgggcaggtgcacatg
cagctgcagaagggagaatttgtcatttctctggatgatggatggatacggtttgtggct
gcctctcaccaggtggctgagctggtgaaagagctgcgctgtgaactagaccagctgctg
caagataaaatcaagaatcccagcatggatttatgcatgtgcccccgtggctcccggatc
atcggtatgattgtaaagcttgtgaccacgcagtaa
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