Larus michahellis (yellow-legged gull): 141740978
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Entry
141740978 CDS
T11135
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141740978 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141740978 (HBS1L)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141740978 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
GIP1_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
141740978
NCBI-ProteinID:
XP_074436767
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Position
3:69022312..69084855
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AA seq
687 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLEEEYG
YESTDDTADCFTSNHQLTEVDRARLNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKAL
DLVLSQGSKQNVKTKNEDAVIVGKTTKGKTRDSQSARMESEIVPKVTKMTVSGKKQSMGF
EVPCVIAEENGHANTPQKGPLTEDASVASGVLEAVSKSTLSSQVAQVSEEQNMVPTPVKK
SSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQ
ESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMIT
GAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQER
FQEITSKLGQFLKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDSF
KPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYIQVGDRLLAMPPNETCTAKGITLH
DEPVDWAAAGDHVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKG
FPVLLHYQTVSEPATIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYK
DFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcacaggaacgtccgagggtataactacgacgaagattttgaagatgatgat
gtgtatggccaatcagtagaagatgattattgcatttctccttcaacagcagctcagttt
atctactccagacgagacaaaccagcaacatttgctgagccactagaagaagaatatggc
tatgaaagtacagatgatactgctgattgttttacatccaaccatcagttgactgaagtt
gacagagcccgtcttaattcatgccttgatcaaatgagagaagttttggcagagtctgta
ccagagcaaacaatggtgcaagcagtactggatagtaaatttgatgtacagaaggctttg
gatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaatgaggatgctgtg
attgtaggaaagacgacaaaaggaaaaacaagggattcccagtcagccagaatggaatct
gaaattgtgccaaaggttaccaaaatgacagtgtctggaaagaaacaatctatgggattt
gaagttccatgtgtgattgctgaagaaaatggccatgctaacacacctcagaagggaccg
ttaactgaagatgccagtgtagcttctggggtacttgaggcagtctcaaaatctactctt
tcatcccaagtggcacaggtttcagaagagcagaatatggtgcctactccagtaaaaaag
tcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagagacaaggagga
aagcaactgcttaatttggtggtaataggacatgttgatgcaggtaaaagtactttaatg
ggtcatctactctaccttctgggaaatgtgaacaaaagaactatgcacaaatatgaacag
gaatctaagaaggctggcaaagcttcgtttgcctatgcatgggtcttggatgaaactggt
gaagaaagagaaaggggagtgacgatggatgtgggtatgaccaaatttgagacaaagact
aaagtaattacactgatggatgctccaggccacaaagacttcattccaaatatgatcaca
ggagctgcacaggctgatgtggctattctggttgtggatgctagcagaggagagtttgaa
gcagggtttgagacgggtggacaaactcgagaacatggattattagtgcgctctcttgga
gtgacacagctagctgttgcagtcaataaaatggaccaggtcaattggcaacaggaaaga
tttcaggaaattacgagtaagctcggccagtttcttaaacaagctggctttaaggaatca
gatgtggcttatattccaacaagtggccttggtggtgaaaatttggtcacaaggggtcag
tcaagtgacctcacgcagtggtataaaggaaagtgtttgttagaacaaattgattccttc
aagccaccacagagatcagtggataaaccatttaggttgtgtgttgctgatgtttttaaa
gaccaaggatcaggattttgcgtgactggtaaaatagaagcaggctatattcaagttgga
gatcgacttctggcgatgcctcccaatgaaacttgcactgcaaaaggaatcacactgcac
gatgaaccagttgattgggctgcagcaggagatcacgttagtctcactttgaccggcatg
gatatcatcaaaatcaatgttggctgtgtattttgtgatcccaaggaaccgattaaagtt
tgcactcgtttcagagctcgggttctcatctttaacattgaggttccaatcaccaaagga
tttcctgtgcttttacactatcaaaccgtaagtgaacctgctactattagaagactgttg
agtgtcctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagttcttgactaaa
ggacagaatgctctaatagaactacaaactcaaagacctgttgctctagagttgtataaa
gattttaaagagcttgggaggtttatgttacgctacagtggttctactattgctgcagga
gttgtcacagagattaaggaatga
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