Larus michahellis (yellow-legged gull): 141741066
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Entry
141741066 CDS
T11135
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03082
ATP-dependent chromatin remodeling
lmic03083
Polycomb repressive complex
lmic04110
Cell cycle
lmic04330
Notch signaling pathway
lmic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141741066 (HDAC2)
03083 Polycomb repressive complex
141741066 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
141741066 (HDAC2)
04350 TGF-beta signaling pathway
141741066 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141741066 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmic03036
]
141741066 (HDAC2)
Enzymes [BR:
lmic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
141741066 (HDAC2)
Chromosome and associated proteins [BR:
lmic03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
141741066 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
141741066 (HDAC2)
BRAF-HDAC complex
141741066 (HDAC2)
REST complex
141741066 (HDAC2)
SHIP complex
141741066 (HDAC2)
MiDAC complex
141741066 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
141741066 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
141741066 (HDAC2)
Chromatin remodeling factors
NuRD complex
141741066 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
141741066
NCBI-ProteinID:
XP_074437021
LinkDB
All DBs
Position
3:78922920..78947899
Genome browser
AA seq
594 aa
AA seq
DB search
MRVKGQEKQDRAGSRSHASSHSSLSRAEPRRRRRIRHVRLASPPRLAADGRARSRCPWPG
VASSRSPASAFSRPFPPPPPPSVPARRSPRPPVPSPRLRLGPGGGPMAYSQGGGKKKVCY
YYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYI
KFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAV
NWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRV
MTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQ
PSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWT
YETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRML
PHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGEGGRRN
VADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDAKGAKSEQLSNP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgagagttaagggccaggagaagcaggatagagccgggtctcgctcgcacgcctcctct
cactcttctctctcccgcgccgaaccccggcggcggcggcggattaggcacgtccggctt
gcttcccccccccgcctcgctgccgatggtagggcccgctcgcgctgcccgtggcccggc
gtcgcgagttcccgctctcccgcgtccgccttctcccgccccttccctcctccgcctcct
ccctccgtgccggctcggcggtcgcctcggcctcccgttccctccccccggctccggctc
ggccccggcggcggccctatggcgtacagtcagggcggcggcaagaagaaagtctgctac
tattatgacggtgatatcggaaactattactatggacaaggacatccaatgaaacctcat
aggatccgaatgacccacaacttgctgctaaattatggcttgtatagaaaaatggaaatt
taccgaccccacaaagctactgctgaggaaatgaccaagtatcatagtgatgaatacatc
aaatttctccgatcgataaggcctgataatatgtctgagtacagcaagcaaatgcagaga
tttaatgttggagaagattgtcctgtatttgatggcctgtttgagttttgtcagctgtca
actggaggctctgttgctggggcggtaaaattgaacagacaacagacagacatggctgtt
aattgggctggaggacttcaccatgccaagaaatcggaggcatctggtttctgttatgtc
aatgatattgtgcttgccatccttgagttactgaagtatcaccaaagagtgttgtatatt
gatattgatatccatcatggtgatggtgttgaagaagcattttataccacagatcgtgtc
atgacagtatcattccataagtatggtgaatattttccgggcacaggggatcttagggac
attggtgctggaaaaggtaaatactatgctgtcaactttccaatgagggatggtatagat
gatgaatcatatggacagatattcaaaccaattatatccaaagtaatggagatgtaccag
cccagtgctgtggtattacagtgtggagcagattcactgtctggtgacaggctgggatgc
tttaatcttactgttaaaggtcatgctaaatgtgtggaagttgtaaagacttttaacttg
ccattgctgatgttaggaggaggaggatacactattcgtaatgttgctcgatgctggacg
tatgaaactgctgttgccttagattgtgaaattcctaatgagttgccatacaatgactac
tttgagtatttcggaccagacttcaagcttcatattagtccttcaaatatgactaatcag
aatacgccagaatatatggagaagatcaagcaacgtttatttgaaaacttgcgcatgtta
cctcacgcacctggtgtacagatgcaggccattcctgaagatgctgttcatgaagacagt
ggagatgaggatggagaagatccagacaaacgcatttctattcgagcatctgataagcgc
atagcctgtgatgaagaattttcagattctgaagatgaaggggaaggtggacgacgaaat
gttgcagatcataagaaaggagcaaagaaagccaggatagaggaagacaaaaaagagacg
gaggacaagaaagcagatgttaaggaggaggataaatccaaggacagcagtggtgaaaag
acagatgccaaaggagcaaaatcagaacagctcagcaatccttga
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