Larus michahellis (yellow-legged gull): 141741431
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Entry
141741431 CDS
T11135
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic00100
Steroid biosynthesis
lmic01100
Metabolic pathways
Module
lmic_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
141741431 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lmic01006
]
141741431 (FDFT1)
Enzymes [BR:
lmic01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
141741431 (FDFT1)
Prenyltransferases [BR:
lmic01006
]
Terpene biosynthesis
Squalene/phytoene synthase
141741431 (FDFT1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
141741431
NCBI-ProteinID:
XP_074438201
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Position
3:complement(128132475..128146985)
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AA seq
456 aa
AA seq
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MAASTKAVSLFKRTLALSPPRGPPRALGRLRGGGRRVQQQQQCGGGVAAAPPAPPPAAPR
LQPPPGTSLCPQDSLGRGLRTCYRYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDT
IEDDMSISLDVKVPMLHEFHSYLYQPEWKYMESKEKDRQVLEDFPTISMEFRNLSKVYQE
VISDICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLVGIGLSRLFSASELEDPIVGQDT
ELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRYAKKLSDLAKPENIDMAVQCLNE
LITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACYNNKQVFRGVVKIRKGQA
VTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSSNKTQQVIASIRAMSLPGGPMASRHH
YSPIYLSCAMLLAALSWQYLSTITKATEEYVQAGEN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagcaccaaagccgtgtccctcttcaagcggaccctggccttgtccccgccg
cggggtcccccccgggcgctggggcggctgcggggcggcgggcggagggtgcagcagcag
cagcagtgtggggggggtgtcgccgccgcccccccggccccgccgccggccgccccccgc
ctccagccgccccccggcacctcgctctgcccgcaggactcgctgggacgcggcctccgg
acctgctaccgctacctcaaccagacgagccgcagcttcgccgccgttatccaggccctg
gacggagagctgcgacacgccgtctgtatattctacctagttctccgtgccctggacact
atagaggatgacatgtccatcagcttagatgtgaaggtcccgatgctgcacgagtttcac
tcctatctctatcaacccgagtggaaatacatggagagcaaggagaaggaccggcaggtg
ctcgaagacttcccaacgatctccatggagttcaggaacttgtcaaaggtttaccaggag
gtgatttcagatatttgccacaagatgggcgtcgggatggcagagttcttggagaagaag
gttgactctcagcatgagtgggataagtattgtcactacgttgctgggctggtggggatc
ggcctttcccgtctcttctctgcatcagagctagaagatcctatcgtcgggcaggacacg
gagctggccaactccatgggcctcttcctgcagaaaaccaacatcatccgtgactatctg
gaggaccagctggagggaagggagttctggcccagagaggtttggagcagatacgcaaag
aagctctcggatcttgccaaaccagagaacatcgatatggctgtccagtgtctgaatgag
ctcatcaccaacgccctccaccatgtccctgatgtcctcacatacttatcccgcctgaaa
aaccaaagcgtcttcaacttctgtgctatcccccaggtgatggctattgccacgttggct
gcctgctataacaacaagcaggtgttcaggggtgttgtgaagatccggaagggacaagcc
gtcactctaatgatggatgccacaaacatacaagctgtcaaagccatcatgtaccagtat
gtggaagagatctaccagaagatcccaagcacagacccgtcatccaacaagacgcagcag
gtcatcgcctccatccgcgccatgagcttgcctggcggccccatggcatcgcgccaccac
tactcccccatctacctgtcgtgcgccatgctcctggctgccctgagctggcagtacctg
agcaccatcaccaaggccaccgaggagtatgtccaggcgggcgagaactga
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