Larus michahellis (yellow-legged gull): 141741919
Help
Entry
141741919 CDS
T11135
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmic03036
]
141741919 (CHD9)
Chromosome and associated proteins [BR:
lmic03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
141741919 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
141741919
NCBI-ProteinID:
XP_074439222
LinkDB
All DBs
Position
4:17618725..17713386
Genome browser
AA seq
2892 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NSQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPIHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALYQANEPQHQCASLRSQQ
SRNNAGQDALSQPKDFMEVNVSTSHRVSVNHPPPVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVNNSQQFSSPYSYSNNHISPTSLLQSTTALSTTQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSSSFQMLHSAHPQGNFSSSKLSPVNISFPAS
AGSASQISHFADPIESNGFTSLDDNLLHQVETHNEPFSGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHITPPQVTQSSDLVGAQSQSQIHPWHSSVSNQHLQGRSRVTLQGQP
PSSKKTDGSGSYTKLQNTQARAMSEKKQKKKADSESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKESKKPKTASSSKMKEKTKIGKLIITLGK
KQKRKNESSDELSDAKQTPQRPVKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVETEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LAGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNEFQKVFDGIDSSEIDVWVPEPDHSEVPAEWWDADADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAM
FKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQ
IPPAFPIQTSMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALAASPLTPQSRLSDAKMNAFE
DTKAKNENLKEDPQSSEEESMSTEETQTIMKSEPLSPKNGTPIQNTDHKPSMKTETDRRM
VAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVA
SLSTTQDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDSNTVASFYTTKLLDSPGAAADYTEPSAPTPPLAGVKEEYDQSPQMSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQSASETSLVNFP
KSLPESGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFINRNKQPNHVNPGINS
CQAAAGINPALTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVE
DSGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSETAKA
TAAAAAATAASVSVNPLLANGLLPGVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTAG
GEAKNMAAMFPMLLSGMAGLPNLLGMGGLLAKSTESISEEKKGSDSKEADIKKERTEEQN
TDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFD
VQNSESNDTGSAKPTEEKEENSRARDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTS
SSSEDSDSSDED
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgacgccaatctttttagtgagactttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcattgaaccatgtgcaagatgctcaa
aattcacaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaaacttcac
tcagtaaatcagtcttttaatagctcagctgacaacgtcttatcaccacactctcaattc
aattgctcaccaattcatccgcaaaaccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcaccaaactgccacaactgtttcgaatcaaaatgggtccccc
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatatcaggctaatgaaccgcagcatcagtgtgcctcgctacggtcgcaacaa
agcagaaacaacgcagggcaagatgctctgagccagccaaaagacttcatggaagttaat
gtatctacttctcacagagtcagtgttaaccacccacctccggtttctaatccatcaact
tcacagcagcctctgtctgttcaacagttttctcaaactgcaagtgcttcgatacatttt
tgtgggaatcaagaaggaaatttcgacggacagtccccaactattactccatgttctgtc
aataatagccaacaattttcatctccttattcttactctaataaccacatttctccaacc
agccttcttcagtctacaacagctctttctactacccaacagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
atgttgaatcctaatacgcctttgaattcaagtagttttcaaatgttgcattctgcacat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattagttttccggcttct
gctggttctgcttctcagataagccatttcgctgaccctattgaaagcaacggttttaca
tctttagatgataacttacttcatcaagtcgagactcataatgaaccgttttcaggactt
gacccggatgacctccttcaggaagaccttctgccacagtttgatgattctgcatttgtt
caggatagcacaagccatgttttagagcatgacctggaacatcatataacgccaccccaa
gtaacacagtcgtctgatcttgttggggcacagtctcagagtcagatccatccttggcat
tcttcagtttctaatcagcacctgcaaggccgaagccgtgtaaccttacaaggacagcct
ccttcctccaagaagactgatggttcaggatcatatactaagttgcagaatacccaggcg
agggcaatgtctgaaaagaagcagaagaaaaaagcagactcggaaagtaaacaagagaag
gcaaatcgcataatatctgaagcgattgcaaaagcaaaagaaagaggagagagaaacatt
ccacgagtaatgagtcctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaag
aagggtagaaaagttaaatccaaaccaaaggacaaggagagcaaaaaaccgaaaactgct
tcctcatccaaaatgaaagagaaaacaaaaattggaaagctaatcatcaccctgggtaag
aagcagaaaagaaaaaatgaatcttcagatgaattgtctgatgctaagcagactccacag
cggccagtgaaagatgaagactcacagaagagaagatcaaatcgtcaagttaaaaggaaa
aaatatgctgaagaaggagaaggaaaacaatcggaagaagaagcaaaagtttctgtgaaa
atcaaaaagaattctgcccctttacctgctgaacagcctttacagttatttgtggaaaat
ccaagtgaagaagatgcagcgattgtagacaaaatcttatcctccagggtaataaagaaa
gaaatatctgctgggatgacagtagaaacagaagagttttttgtaaagtacaagaactac
tcttatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccag
cagaaaataaaacgtttcaaactaaggcaagcacaaagagctcacttttttgcagatatg
gaagaagaaccttttaatcctgactatgttgaagtagaccgggtattagaagtatctctt
tgtgaagataaggacactggtgagcctgttatttactatttagtaaaatggtgttcattg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaac
tcctggaagaagatagagcagtccagggaatataaaaatggcaatcagctcagggaatat
caactggaaggacttaactggctcctattcaactggtacaataggcgaaattgcatttta
gcggatgaaatgggtctcggcaaaaccattcagtcaattacattcctctatgaaatcctc
ctggctggtataagagggccttttctgatcatagctccgctttccactataaccaactgg
gaaagagaatttcgcacgtggactgaccttaacgttgtagtgtatcatggaagtatgatc
agcaggcagatgattcagcagtacgaaatgtatttcagggactcccagggacgtatcgtt
cgaggtacctacagattccaagccattatcacaacttttgaaatgattcttggtgggtgt
ccagagttaaatgcaattgaatggcgctgcgttattattgatgaagctcacagactgaag
aacaaaaactgcaaactgttggaaggactaaaattaatgaatcttgagcataaagtgctg
ttaacgggtaccccactgcagaacacagtagaagaattatttagcctccttcattttctc
gaaccattgcgctttcctgctgaatctacattcatgcaagaattcggagaccttaaaaca
gaggaacaggttcagaaactacaagctatcctgaaacccatgatgctcagacgattaaag
gaagatgtagaaaaaaagctggctcctaaggaggaaactataattgaagtagagctaact
aatattcagaagaaatactatcgagcgattttggagaaaaattttgctttcttatccaaa
ggagcggggcaagcaaatgtacccaatctggttaacactatgatggaactcagaaagtgt
tgtaatcacccttacctcatcaaaggtgctgaagagaaaattctgggagagtttaaagaa
acgtatagcccaagtgctcctgacttccatctgcaagcaatgatccagtctgctggtaaa
ttggttcttattgataaacttcttccaaaaatgaaagcaggaggccacaaggtccttatc
ttctctcagatggtacgctgccttgatattttggaggattaccttatacataaaagatat
ttatatgaacgaattgacgggcgagtgcgagggaatctcagacaagctgccattgaccgg
ttcagcaaaccagattccgatcgctttgtcttccttctgtgcaccagagctggtggtttg
ggcattaatttaactgcagcagacacatgtataatttttgattctgactggaatcctcaa
aatgatctgcaggctcaagcgcgttgtcacaggatcggtcagaacaaagcagtgaaggtc
tacaggctgataacgcgcaactcttacgagagagagatgtttgacagagcaagtctgaaa
ctggggctggataaggctgtcctacagagtatgagcggaagagagaacagtgtcggtggt
atccaacaactctccaaaaaagaaatagaagacttgcttcgaagaggtgcgtatggtgcc
attatggatgaagaggatgaaggctctaaattctgtgaggaggacattgaccaaattttg
cagcgtcgtactaaaactatcacaattgaatcagaaggaaggggctccacatttgccaag
gctagttttgttgcatctggaaacaggactgatatttcactagatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaatagatatagacgctatcagtggtagaaacagcctg
gttattgataccccaagaatcaggaaacaaacacggccctttagtgctacaaaagatgag
ctggccgagttgtctgaggtggagagcgaaggtgatgacaaaccaaaactccgcaggcct
tgtgaccgttccaatggatatggaagaacagagtgctttcgggtggaaaaaaacttgctg
gtctatgggtggggtcgatggagagaaattctgtcacacggtcgcttcaagaggcagctg
aatgaacaggacgtggagataatttgccgagctctgttagcctattgccttgttcactac
agaggggatgagaaaataaaaagttttatatgggatctcattaccccaacagaggatggg
caaacacgagagttacagaatcaccttggcttatcggcccctgtgcctagaggaagaaaa
ggaaaaaaagtgaagacccaggctagcacttttgatatacacaaagcagaatggcttcga
aaatacaatccagaacatctgttgcaagatgaaggatacaaaaagcacataaaacaccat
tgcaacaaggtcttgcttcgagtaaggatgctgtattacttaaaacaagaagtcattggt
aatgaattccaaaaggtgtttgatggaattgattccagtgaaattgatgtttgggtccct
gagccagatcactctgaagttcctgccgagtggtgggatgcagatgcagataaatccctt
ctaattggcgtttttaaacatggttatgaaaaatacaacaccatcagagcagacccagcg
ttgtgcttcttggagagggttggcaagccagatgaaaaagcagttgctgccgaacagaga
gcaaacgattatattgatggggatgtagaagatccagaatataaaccagcaccagcaatg
tttaaagatgacatagaggatgatgtttcatccccaggtgatctagtaatagcagatgga
gatggacaaatgatggaaggagacaaaatctattggcccactcagtctgccttaacaaca
cgtcttcgccgcttaataacagcttatcaacgaacaagtaaaaataggcaggcccagcag
atcccgccagcattcccaatacaaactagtatgatgcagcctccatatgaagaagcggct
ctaaatccaaagatggctgctaagattgaaagacagcaaaggtggacgagaagagaagaa
gctgacttttacagagttgtgtccacatttggagtggtgtttgatcctgaaaggggcaga
tttgattggaccaaatttcgagcgatggctaggctgcataagaaaactgatgagagctta
gagaagtacttgtatgcgtttatgtccatgtgccggagagtctgtcgtctcccctcaaaa
gaagaactcgtagacccaaacatctttatccagccgattacagaggagcgtgcttctcgg
acgttgtatcgcattgaactcctaaggaaagtgcgagaacaggctcttcgacacccacag
ttgtttgagcgactaaaactatgccagccaaacccagacttacctgtctggtgggagtgt
gggactcatgacagggatttacttattggagctgctaaacatggagtcagcaggacagat
tatcatattcttcgtgatcctgaactctcgtttatgtctgcccagaggaactataatcaa
aataaagtggcactctcaaggacttctactccactcttgcatcagtaccagatggcatta
gctgcttctcctcttacacctcagtcaagattgtcagatgctaaaatgaatgcttttgag
gacacaaaagctaaaaatgaaaacctgaaagaggaccctcagtcttctgaagaggaatct
atgtctacagaggagacacagacaataatgaaatctgaacctttgagtcccaaaaatggc
acaccaatacaaaatacagaccacaagcctagcatgaagactgaaacagacaggcgcatg
gtggcagcaaggacagagcctctaactccaaacccagcttccaaaaaacagagagtcagc
aaaagggggtctgactctagctctgactcagattctgactcagatagatcatcctgttct
tccaggtcatcttcttcatcctcttcatcttcctcatcttgttcacactctcgatcaggc
tctagctcttcatcatcttcatcttgttcttcagcatcttcttcatcctcctcttcatcc
tcatcatcgtcgtcgtcgtcgtcatcatcatctgaagagagtgatagtgatgaagaggag
gcacaaaaacgtgcagaaggaaccccgcatataaaagcgtatgatgaggagagcgtagcc
tctctgagcacaacacaagatgagacacaggacagtttccagatgaacaatgggacacca
aattccagttatctcctgcaaggtggatacatgttggctgcatcctactggccaaaggat
cgagttatgattaatcgacttgacagtatttgtcaaacagtgttgaaagggaaatggcct
tctgcccgaaggagctacgacagcaatacggtggcatctttctacacaaccaaacttctg
gatagcccaggtgcagctgcagattacactgagcccagcgcaccaacaccccctctcgca
ggtgttaaagaagagtatgatcaatcaccacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaag
cagggactgtctcagaaaaggccatttgaaagcgaggaaggtgcattgggacagcagcaa
tacctggctcggctacgtgagctccagagcgcttcagaaaccagccttgtcaacttccca
aaatcacttcctgaatcaggtacttccagtcacttaacagccagtgccaatggagtcata
gttgacagtcagcctgtagtcaaaaagagaagaggaagaaggaagaatgtggagggagtt
gatgtcctctttataaatcgaaataaacagcctaatcatgttaatccaggtatcaactcc
tgtcaagctgctgcaggaataaacccagcgctcacttacacacagtcccagggcatgctt
gatgcagagagtccggttcctgttattaacctcaaagatggaacgaggcttgcaggggat
gatgcccccaaaagaaaagatttagaaaggtggcttaaagaacatcctggatatgtggaa
gattcaggagcttgtattcctaggatgcagctgcacgatgggaggcccaaacaaaaaaga
caccgttgtcgaaacccaaataaactggatgttaatagtttgacgggtgaagaacgtgtc
cagctcataaatagaagaaatgcgagaaaggtggggggtgcatttgctccccctctgaag
gatttatgcaggttcttgaaagaaaatccagagtatggagtggctcctgaatggggagaa
gttgtaaaacagtctgggtttctcccagaaggtatgtttgaccgtattctcactggacct
gttgtgcgggaagaagtaagccggagaggaaggcgccccaaaagtgagactgcgaaggca
acagcagctgcagcagctgccactgctgcgagcgtatcggttaaccccctgctagctaac
ggattgcttccaggggtggatctgcctagtcttcaggccttacaacaaaacctgcaaaac
ctgcagtcgctgcaagtaacggcagggttgatgggaatgccagctggcttaactgctgga
ggagaagcaaagaacatggctgccatgttccccatgctgctgtcggggatggctggatta
ccaaacctgctgggcatgggaggacttctagcaaagtctacagaatctatttcagaggaa
aaaaagggaagcgattcaaaggaggcggatataaagaaagaaaggacagaagagcaaaat
acagatactggtggtgaaaactctgtttcaagttctccttcaacatcctctgctgctgca
gctgccaatcctctctctcttaacccattacttttgtccaacatactttacccagggatg
cttctcactccaggccttaatcttcatatcccagctttgtctcagtctaatatttttgat
gtacagaacagtgaaagcaatgacacaggctcagccaagcccacagaagaaaaggaggaa
aattctagggctagagatcaggaagacaaagggggaacagagccaagctctcacaacgaa
aacagcacagatgagggttcagagaaagcagacgcttcatctggatctgatagtacatcg
tcttcatctgaggattcagattctagcgatgaagactga
DBGET
integrated database retrieval system
