Larus michahellis (yellow-legged gull): 141742284
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Entry
141742284 CDS
T11135
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141742284 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141742284 (CPSF2)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141742284 (CPSF2)
U7-dependent histone pre-mRNA processing factors
141742284 (CPSF2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
141742284
NCBI-ProteinID:
XP_074440284
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Position
4:complement(40501851..40516511)
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AA seq
803 aa
AA seq
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MKHFLPPSRLVLLEIKRLESKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEN
FSMDIIDSLRKHVHQVDAVLLSHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMY
DLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTI
WKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQL
LTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEF
SKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHSLSDLARVSSPKVVLASQPDLECGFSR
DLFIQWCQDSKNSIILTYRTTPGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKE
KLKKEAAKKLEQSKEADIDSSDESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKK
SYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVP
TKCISASESMEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCR
AFGGKDIKVYVPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRV
SKVDTGVILEEGELREDEDLEMQVDMPSSDSSVIAQQKAMKSLFGDDDKEMCEETEIIPT
LEPLPPHEVLGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIG
LEGCLCQDFYRIRDLLYEQYAIV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaaacattttcttcctccatccagattagttcttttggagattaaacgcttggagagc
aaaatgacgtcgattatcaagttgactacgctttcaggggtgcaggaggaatctgccctt
tgctatctcttgcaagtagatgaatttcgttttcttttggactgtggctgggatgaaaac
ttttctatggatattattgattccctgaggaaacatgtacaccaggttgatgctgttctt
ctttctcaccctgaccctctacaccttggtgctcttccatatgcagttggaaaaatgggg
ttgaattgtgccatttatgcaactattcctgtatataaaatgggacagatgtttatgtat
gatctctaccagtcccgccataatactgaagatttcacactctttacattggatgatgta
gatgcagcctttgataagatacaacagctgaagttttctcagattgtgaacttaaaaggc
aaaggacacggtttgtcaatcacaccattgccagctggccacatgataggaggcacaatt
tggaagattgtcaaggatggagaggaagaaattgtttatgcagtggatttcaaccacaag
agggagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgcttatt
acagactcatttaatgctacttatgtacaacccaggaggaagcaaagggatgaacagcta
ctgactaatgttttggagacattacgaggtgatggaaacgtattaatagccgtggataca
gcaggcagagttctggaacttgctcaacttcttgatcagatctggagaacgaaagacgca
ggattaggagtctactctctagcacttttgaataacgtcagctacaatgtagtggagttc
tctaaatcacaggttgaatggatgagtgacaagttgatgaggtgctttgaagacaagaga
aacaatccttttcagttccgccatctctccttatgtcacagtctgtctgatctggctcga
gtgtctagtccaaaagttgttcttgccagtcaacctgacttagagtgtggtttttctaga
gatcttttcattcagtggtgccaggattctaaaaactctataattttaacttatcgcact
acgcctggaacattagcacgattcctgattgataatccttctgaaaaagttatagatatt
gagttgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggag
aaactaaagaaagaagcagctaagaagctagaacagtctaaagaggcagatattgattct
agtgatgagagcgatgctgaagaggatattgatcagccaaccgtacataagaccaaacat
gatttgatgatgaaaggtgaaggtagtcggaaaggaagcttcttcaaacaggcaaagaaa
tcttatccaatgtttccagcccctgaagaaagaattaaatgggatgaatatggcgagatt
atcaaacctgaggattttctagttccagaacttcaagcaacagaagaagaaaaaagcaaa
ttagaatctggtttgacaaatggagaagagcctatggaccaggatttatcagatgttcct
accaaatgtatttctgcatcagaatcgatggaaattaaagccagggttacgtacattgac
tatgaaggacgctcagatggggactcaattaaaaaaataattaaccaaatgaaaccaaga
caactgatcattgtccatggaccacctgaggccagtcaggaccttgcagaatgttgcaga
gcttttggtggaaaagatattaaagtttacgtgccgaaactgcatgaaactgtagatgca
accagcgaaactcacatttaccaggtcaggttaaaagattctcttgtcagctcccttcag
ttctgtaaagccaaggatgctgagttggcttggatagatggtgttctggacatgcgagtt
tccaaagtggatactggagttattttggaagagggagagctgagggaagatgaagactta
gaaatgcaagtggatatgccttcttcagactctagtgtcattgcacaacagaaggccatg
aaaagcctctttggtgatgatgacaaggagatgtgtgaggagaccgagatcattcctact
ttggaacctctgccgcctcatgaggttcttggacatcagtctgtgtttatgaatgagccg
agactgtctgacttcaagcaagttctcctgcgagaaggtatacaggctgaatttgtagga
ggagtgcttgtgtgcaacaacctggtggctgttcgcaggactgaaacagggcgcattgga
ttggaaggctgcctctgtcaagacttctataggataagagaccttttgtatgagcaatac
gctattgtctaa
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