Larus michahellis (yellow-legged gull): 141742311
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Entry
141742311 CDS
T11135
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmic03036
]
141742311 (WDHD1)
Chromosome and associated proteins [BR:
lmic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
141742311 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
WD40
HMG_WDHD1
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
HMG_box
eIF2A
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
NBCH_WD40
HMG_box_2
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
141742311
NCBI-ProteinID:
XP_074440351
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All DBs
Position
4:42134153..42163403
Genome browser
AA seq
1122 aa
AA seq
DB search
MPSEQKPMRYGHTEGHTDVCFDDTGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGRLITAVSNNTVQIHTFPEGAPDGILTRFTTNANHVIFNCDGTKIAAGSSDFMVKV
VEVTDSSKQKTFRGHDAPVLSLSFDPRDVYLASASCDGSVRVWKIADQTCTTSWPLLQKC
NDVINAKSICRLGWQPGSGKFLAIPVDKVVKLYKRETWDSQFNLSDTFITQPLNVVAWSP
CGQYLAAGSVDGSIVVWNVETQECIERMKHEKNYTICGLAWHPKYRQIAYTDTEGNLGLL
ENVGDGKKPNDKVASTVTKDYNDLFDGEDGDYLNGDMIEPQSSPKAGANEDDGDDDDLMR
TSGHPRRANIDDDDNSLDIGMIKANANLLEKEDDDDDQTDGFPALPPSSTQQPFYDGPMP
TPKQKPFQSGSTPAHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSIHHATHLPNSLN
HTMADLSTEAILLACESTEELASKLHCIHFSSWDANKEWTVDMPKDEDIEAICLGQGWAA
CATSALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMIIYHRGTGFDGDQCLGVQLMEL
GKKKKQILHGDPLSLTKKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWIPVCNTRE
HCKGKFDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQVTTEKGQME
EQYWRSVVFHNHVDYLSKNGYELDENANSQSVKEQQELLMKLFALSCKLEREFRCVELAD
LMTQNVVNLAIKYASRSRKLNLAQRLSEMAVEKASELATALEDEEEEEDFRKHLNAGYRN
SAMEWGQLPVRNVQWDQEMEDAEETDACEEAEETSEVHKQRPNPFSKGVTSAEVTTPKPA
VIASSSQGRVNPFKVSSNKRDPVVPSVNVLDTMSKYSKKTLSSNRAVNKQNPPVIKPLIP
KPKSKQASAASFFQPRTSNSSEKTVEEREENAGNESHDVKVTAQENTENRRPKTGFQMWL
EENRANILTDNPDLNEAEVIKEGMSRFRMLSSEERMVWTEKAKGGTVNDLTEDKKRKRPA
ADEDEVKKNQEQKSEDSNLSKKTKPLDQSTNVRLSAFAFKQS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgagcaaaagccaatgcggtacggccacaccgagggacacacggatgtctgc
tttgatgacactggaagctgtattgtaacttgtggcagtgatggagatgttaggatttgg
gaaaacctggatgatgatgatccaaagtccattaatgtgggagaaaaggcctattcctgc
gctctaaagaatggaagactgatcacagcagtatcaaacaatactgttcagatacataca
tttcctgaaggagccccagatggcatccttactcgtttcaccacgaatgcaaaccacgtc
atctttaattgtgatggtaccaaaattgctgctggatctagtgactttatggtcaaagtg
gtggaagtgactgatagcagcaagcagaaaacattccgaggacacgacgctcctgtttta
agcctgtcttttgaccccagggatgtttatctggcatcggcgagctgtgatggttctgtc
agagtatggaaaatagcagatcagacgtgcacaacaagctggccactgctgcagaaatgt
aatgatgtgataaatgctaaatcaatttgcaggcttggctggcaacctggcagtgggaag
ttcctggcaattcctgtagataaagtcgttaaactatacaaaagagaaacctgggatagt
cagttcaatctatcggatacattcatcacacagcccttgaatgttgtggcctggtctcct
tgtgggcagtatctggcagctggaagtgtggatgggagtatagtggtgtggaatgtggaa
acccaggagtgcatagagaggatgaagcatgagaaaaattacacaatctgtggactggcg
tggcaccccaaatataggcaaatcgcttatacagatactgagggaaatctggggctgttg
gaaaatgtcggtgatggaaagaaaccaaatgacaaggttgccagtacagtgacaaaagac
tacaatgatctctttgatggagaagatggtgactatttaaatggagatatgattgagcca
cagtcttccccaaaggctggagctaatgaagatgacggtgatgatgatgaccttatgcga
acttcaggccatccgagacgggcaaatattgatgatgatgataactcactagatattggg
atgataaaagctaatgccaatcttcttgaaaaggaagatgacgatgatgatcagactgat
ggctttccagctttaccaccatcatctacacagcagcctttctatgatgggccaatgcca
acccccaagcaaaagccgttccagtctggctccactcctgcacatctcatgcatcgtttc
atggtatggaattctgttggtattattcgctgttacaatgatgagcaagacaatgctata
gatatagaatttcatgatacttccatacatcatgcaacacacctgccgaactctctgaat
cacacgatggctgacctctccactgaagcgattttactggcctgtgagagtacagaggaa
cttgcaagcaagctccactgcattcattttagctcctgggatgcaaacaaggagtggaca
gtagatatgccaaaggacgaagacattgaggccatctgtctgggtcaaggctgggctgct
tgtgccaccagtgccttgctggttcgtgtgtttacagttggaggagttcagaaagagatc
ttcagtctcccaggtcccgtggtctctatggcaggacatggagagcagttgatgattatt
tatcatagaggtactgggtttgatggggaccagtgcctcggagtacagctgatggagcta
ggaaaaaagaaaaaacaaattttgcatggagaccctctttctcttacaaagaaatcctat
ttggtatgggttggattctccgcagaaggtaccccgtgttacgtggattctgagggaatt
gtgcggatgttgaaccgaggacttgggaatacttggattccagtgtgtaacacgagagag
cattgcaaaggaaaatttgatcattattgggtagttggcatccacgaaaatccccagcag
ctcaggtgtattccttgtaaaggatcccgattccctcctacgctaccacgacctgctgtg
gcaatattatcttttaaacttccttactgtcaagttacaacagaaaagggacagatggag
gagcagtactggcgttctgttgtatttcacaaccatgtggattacttatcaaaaaatggc
tacgagcttgatgaaaatgctaacagtcagtcagtgaaagaacagcaagaacttttaatg
aagctgtttgccctttcttgtaaactggagcgcgaatttcgttgtgtggaacttgctgac
ctcatgacacaaaacgttgtgaatttagctatcaagtatgcttctcgctctcgaaaacta
aatttagctcagcgacttagtgaaatggctgtagaaaaagcaagtgagttggcaacagca
ctggaagatgaagaggaggaagaggatttccgaaagcacttgaacgccggttacagaaac
tctgctatggaatggggtcagctgccagtcagaaatgttcagtgggaccaagaaatggaa
gatgcagaggaaactgatgcctgtgaggaagcagaagaaacatcagaagtgcataaacag
aggccaaatcctttctccaaaggagtcacttcagcggaggtgactactccgaagcctgct
gtaattgcatcaagcagccaaggacgagtgaatccctttaaggtgtcatctaacaaaagg
gacccagtggtcccctcagtgaatgttctagacactatgagcaaatactcaaagaaaact
ttgtctagcaatcgagccgtaaacaagcagaaccctccagttataaagcctctgattccc
aaacccaagtccaagcaggcttcagcagcctccttcttccagcctcgtacatctaactct
agtgaaaaaacagtggaagaaagagaagaaaacgcgggaaacgagtcccatgatgtcaaa
gtcactgcacaggagaacactgaaaacagaaggccaaagacaggattccagatgtggcta
gaagagaacagagcaaacattttgacagataatcctgatctgaatgaagcagaagtaata
aaagaaggcatgagtcggtttagaatgctgtcgtccgaagaaagaatggtgtggactgag
aaagcaaaaggaggaacagtcaatgatttaacagaagataaaaagcgaaagcgtcccgca
gctgatgaagatgaagtgaaaaagaatcaggagcaaaaatcggaggactcaaatttatcc
aaaaaaacgaaacctttagatcaatctacaaatgtcagattgtcagcttttgcgttcaag
caaagctaa
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