Larus michahellis (yellow-legged gull): 141743288
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Entry
141743288 CDS
T11135
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04140
Autophagy - animal
lmic04148
Efferocytosis
lmic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141743288 (VPS16)
04148 Efferocytosis
141743288 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141743288 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmic04131
]
141743288 (VPS16)
Membrane trafficking [BR:
lmic04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
141743288 (VPS16)
Hops complex
141743288 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
141743288
NCBI-ProteinID:
XP_074443199
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All DBs
Position
5:complement(45852926..45863326)
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AA seq
838 aa
AA seq
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MDCYTANWNPLGEEAFYRKFELYTMEWNLKEDLRDCLVAAAPYGGPIALLKNNARKEKSP
SARPLLEIYSASGLLLASIPWKSGQLVQLGWTASEDLLCIQEDGTVLIYNLFCEFKRHFS
MGNEVLQNHVLEAKVFHTEYGTGVAILTGAHRFSLTTNIDDLKLRRMPEVPGLQKPPSCW
AVLSQDRVTIVLLAVGQDLYLLDNTSCSVVTPPGMSPSAGAYLQMAVSFNYRCLALFTDT
GYIWMGLATLKEKLCEFNSSIRSPPKQMVWCMRPRSRQRAVVVAWDRQLMVAGNSTECIQ
FVLDEDSYLVPELDGVRILSRTSHEFLHEIPEASQEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIKDQKLLPEAVSQCIEAAGYEHEPDTQKSLLRAASFGKCFIDKFPPESFVR
MCQDLRVLNAIRDYQIGIPLTFTQYKRLTIEVLLDRLVLRRLYPLAIRICEYLRLSEIQG
VSRILAHWACYKVQQKDKSDEEVAHAINQKLGDTPGISYSEIAARAYDCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVYTVVLHLKNELNRGTFFMTLQNQPVA
LSLYRQFCKHQERETLKDLYNQDDNHQELGNFHVHSSYSEKRIEGRVGALQNALDEYYKA
KNEFAAKATEDQIKLLRLQRHLQEDFDKPYLDLSLHDTVSNLILDGHHKRAEQLYRDFKI
PDKRYWWLKISALANRGDWEEMEKFSKSKKSPIGYLPFVEISVKHHNRYEAKKYAPRVTP
EQRVKAFVLVGDLDQAADAAIEHKNETEMNFVLSKCTASTDTAVVEKLNRARAQLLKK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacacggccaactggaacccgctgggcgaggaggccttctaccggaagttc
gagctgtacaccatggagtggaacctgaaggaggacctgcgggactgcctggtggcggcc
gccccgtatgggggacccatagctctgctgaagaacaacgcccggaaggagaaatccccc
agtgcccgcccgctgctggagatctactcagcctcggggcttctcctggccagcatcccg
tggaagagtggccagttggtgcagctgggctggacggccagcgaggacctgctgtgcatc
caggaggatggcaccgttctcatctacaacctcttctgcgagttcaagcgccacttcagc
atgggcaatgaggtgctgcagaaccacgtgctggaggcgaaggtcttccacacggagtac
ggcaccggcgtggccatcctcactggggcacaccgcttctccctgaccaccaacatcgac
gacctgaagctgcgcaggatgcccgaggttcccggtcttcagaagcctccttcctgctgg
gctgtgctgtcgcaggacagagtcaccattgtcctgctggcagtcggacaggacctctac
ctcctggacaacacctcctgctctgtggtgacgccccctggcatgagcccctctgctggc
gcctatctgcaaatggccgtgtccttcaactaccgctgcctggcgctcttcaccgacacc
ggctacatctggatggggctggccacgctgaaggagaagctctgcgagttcaacagcagc
atccgatccccacccaagcagatggtttggtgcatgcgtccccggagccggcagcgtgcc
gtggtggtggcctgggaccggcagctgatggtggcagggaactccacggagtgcatccag
tttgtcctggatgaagactcctacctggtccccgagctggacggggtccggatcttgtct
cgcacctcccacgagttcctgcatgagatcccagaggccagccaggagatcttcaagatc
gcctccatggccccgggagcactcctgctggaggcacagaaggagtacgagaaggagagc
cagaaggcagatgagtacttgcgggagatcaaggaccagaagctgctcccggaggcagtg
agccagtgcatcgaggcggctggctacgagcacgagccggacacccagaagtcactgctg
agggcagcctccttcgggaagtgcttcatcgacaagttccccccggagagcttcgtgcgc
atgtgccaggacctgcgggtgctcaacgccatccgggactaccagatcggcatccccctc
accttcacccaatataagcggctcaccattgaggtcctactggacaggctggtcctgcgg
cggctctaccccttggccatcaggatctgcgagtacctgcgcctctcggagatccagggc
gtcagccgcatcctggcccactgggcctgctacaaggtgcagcagaaggacaagtccgat
gaggaggtggcccacgccatcaaccagaagctgggcgacacgccgggcatctcctactct
gagattgccgcccgggcttatgactgcggcaggacagagctggccatcaagctgctggag
tatgagccacgctctggggagcaggtcccgctgctgctgaagatgaagcggagcaagctg
gccctcagcaaagccatcgagagtggggacactgatctggtctataccgtcgtgctccac
ctgaagaatgagctgaatcgtggcaccttcttcatgacgctgcagaaccagccggtggct
ctgagcctgtaccgccagttctgcaagcaccaggagcgggagacgctgaaggacctgtat
aaccaggacgacaatcaccaggaacttggcaacttccacgttcactccagctactcggag
aagcgcatcgagggccgagtaggagctctgcagaatgccctggacgagtactacaaagcc
aagaatgagtttgctgccaaggccacagaggatcagatcaagctcctgcggctccagcga
cacctccaggaagactttgacaagccttatctcgacctctcactgcacgatactgtctcc
aacctcatcctggacggccaccacaagcgagcggagcagctctaccgggacttcaagatc
cctgataagaggtactggtggctgaagatcagtgccctggccaaccgcggcgactgggag
gagatggagaagttctccaagagcaagaaatcgcctatcgggtacctgccttttgtggag
atctcggtgaagcaccacaaccgctacgaggccaagaagtacgcgccccgagtgacccct
gagcagcgtgtcaaggccttcgtcctggtgggggacctggaccaggcggccgatgctgcc
atcgagcacaagaatgagacagagatgaactttgtgctgtccaagtgcacggccagcacc
gacacagccgtggtggagaagctgaaccgggcccgagcccagctcctgaagaagtga
DBGET
integrated database retrieval system
