Larus michahellis (yellow-legged gull): 141743692
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Entry
141743692 CDS
T11135
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141743692 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmic04990
]
141743692 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
lmic04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
141743692 (SYNPO2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Calsarcin
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
141743692
NCBI-ProteinID:
XP_074444582
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Position
5:complement(7222083..7310116)
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AA seq
1273 aa
AA seq
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MLPNRTGKMGTGDYLCIAMSGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDE
VVSINGKPCGDLTYAEVIVLMESLTDVLQMLVKRSSNGINETLSAERENGKHDNIKNEDY
RESTTLQINTAKEIPHGDLCITEIYSETHHGAEESNTHFSEMKQETTQSHRITPKVIGTS
KVLVTDEAAFRGKTEERRPGTMVELQLSLSNEVHKGINAPAVTLSGAEKCTSSGRGPSVQ
QDGTSPVIAIPLGVKEGNIQWSSKVVQFSSGKEVKRIQGAAPSLPRVEVILDCSDREKEA
PRSLAERGCVDSQVEGGQSEAPPSLLSFAISSEGTEQGEDDQHSERDHRPLKHRARHARL
RRSESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELE
RDEDEREEGEGEEGDKENTFEVSLLATSESEIDEDFFSDIDNDGKIVTFDWDSGLLEVEK
KTKSGDEMQTLPESTGKGALMFAKRRQRMDQITAEQEEMKARTVHTEERREATMSENFQK
VSSSVYQTKEEEMSRQQTCVSKSYTDVSQNHSKMVQQNGFGLAPDTNLSFQSSAGQKAAS
LNKTAKPFPSGVQNRAAAPFSPVRNVTSPLSDIPAPPPYCSISPPLEALYRPVSAPVANR
AAPTVWSPTEPAEHIASRDERIAVPAKRTGILQEAKRRSTSKPMFTFKEAPKVSPNPALL
SLVHNAEGKKGTGAGFESGPEEDYLSLGAEACNFMQTQASKQKAPPPVAPKPSLKVSPTA
GTPVSPVWSPPAVSSNKAPSFPAPASPQAAYPAPPKSPQYPHSPVHPPSTLDLAGPFKGP
QATLASPNHTPKTPVTPSAGETKPPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQAN
MARASSPTPSLPASWKYSSNVRAPPPVAYNPIHCPSYPPAATKPSSKSTAATKNTKRKPK
KGLNALDIMKHQPYQLDASLFTFQPPSNKESLAIKQTSKLSPSKQALPFRPPSAGSPTNA
RASSVYSVPAYSSQPSFQSNASLPVNESYSPTSYSAFSKPETTTSSLFTAPRPKFSAKKA
GVTAQERSSGRSLSLPGRPSSFISRAMSPTSPLIFQPAPDYFSKPDTAADRPGKRPTPWE
AAARSPLGLVDEAFGPQNIQESIAANIVSAARRKTLPEPPDGWKQKVSYEPPAPSGSVAL
LGGKQSGIVSPPKSSLSAPGATTRAGSQLKSPYCSQRSRTDPDIMSVDSRSDYCLSTADS
NYNPQPRGWRRPT
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctaaccgcaccgggaaaatgggcacaggggattatctctgcattgctatgagt
ggaggggcgccttggggctttagattgcaaggtggcaaggagcaaaagcagcctttgcaa
atcgccaaggttcgcagcaagagcaaagcagctaaggctggactgtgtgagggagatgag
gtggtgtctatcaatggcaagccttgtggagacttaacgtatgctgaagttattgttctg
atggaaagcctgactgacgtcctgcagatgctcgtcaagagatcctccaatggaataaat
gaaaccttgagcgctgaaagagaaaatggaaagcacgataacataaaaaatgaggactac
agggagagtactacactgcaaattaatacagcgaaagagattccccatggagatctatgc
atcacagagatatacagtgagactcaccacggagcagaagaaagcaacacacacttttct
gaaatgaaacaagagaccacacaaagccacagaattactcctaaagtgataggcacctcc
aaagtgctcgtgacagatgaggcagctttcagagggaagacagaagaaagaaggccaggt
actatggtcgagctgcagttatccctctcaaatgaagtgcacaagggcatcaatgctcct
gctgtgactctctcaggggcagaaaaatgcacctcttcaggaagaggacccagtgtacaa
caagacgggactagccctgtaatcgcaattcccctgggtgtgaaagagggcaacatccag
tggtcaagcaaagtagtccagttttctagtggcaaagaggtcaagaggatccaaggtgcg
gctccatcgctccccagggtggaggtgatcctagactgttcggacagggagaaggaagca
cccaggtctctagctgaaagggggtgtgttgattctcaagtggaaggagggcagtcagaa
gcacctccttccctcctctcctttgcaatctcatcagaaggcacagagcagggagaagac
gaccagcactctgaaagggatcacagacctctcaagcacagggcgaggcacgcaaggctc
cggcgaagtgagagtctgtcggagaagcaggtcaaagaagccaaatctaaatgtaaaagt
attgcattgctgctgacagcagctcccaatccgaattccaagggggtgttgatgttcaag
aagcgtcgtcaaagggcgaggaaatatactttagttagctacggtactggggagttagaa
cgtgacgaagacgagcgggaagaaggtgaaggtgaagagggggacaaagaaaacactttt
gaagtgagtttgcttgcaacaagtgagtcagaaatagatgaagatttcttctctgacatt
gacaacgacggtaagattgtgacatttgactgggacagtggtttacttgaggttgaaaag
aagacaaaaagtggagacgagatgcagacgcttccagagagcacaggtaaaggggcactc
atgtttgccaagaggcgacagaggatggatcagattacagctgagcaagaggagatgaag
gcacgcacggtgcacacagaggaacgaagggaagccaccatgtcagagaacttccagaaa
gtaagctcttcagtctatcaaacaaaagaggaagaaatgtcgagacagcagacctgtgtg
agcaaaagctacacagacgtgagccaaaatcatagcaaaatggtacaacaaaatggcttt
ggcttagcaccagacacaaacctctcttttcagtcctctgcaggacaaaaagcagcgtct
ttgaataaaacagctaaacccttcccgtctggagttcaaaaccgggcagctgcaccattt
tcacccgtaagaaatgtcactagtcctctttcagatataccagcaccacctccttactgc
tctattagcccaccacttgaggctttatacagacctgtttcagctcctgtggcaaacaga
gctgccccaactgtgtggtcacccaccgagccagcagaacacatagcatccagagatgaa
aggattgcggtgccagccaaaagaactgggatactgcaagaggcaaagagaagaagcact
tcaaaacctatgttcactttcaaggaagcacccaaagtaagtcctaatcctgccctgttg
tcccttgtacacaatgcagagggcaaaaaaggtactggagctggttttgagtccggacct
gaagaagactacctcagtttgggagcagaagcttgcaatttcatgcagactcaagcgtct
aagcaaaaggcccctccccctgttgctccaaagccttcactcaaggtctctcctactgct
ggtactccagtgtcaccagtctggtcacctccagctgtgtcttctaacaaggctccttct
ttcccagcaccagcctcacctcaggcagcatatcctgcaccacccaaatctccacagtat
cctcattctcctgtccaccccccaagtactctcgacctagccggtcctttcaaagggcct
caggcaaccctagcgagtccaaaccacacacccaagacaccagtcacaccaagtgctgga
gaaacaaagccaccctttgagatgccaccagctatgagtggaaaaggagcacagttattt
gccagaaggcactctcgaatggagaagtacgtggtagattcagagactgtgcaggcaaac
atggcacgagcctcatctccaactccatctttaccagcctcttggaaatactcatctaat
gtccgagcacctccacctgttgcttataatcccatccactgcccatcttatcctcctgct
gctaccaagccttcctctaagtccactgctgctaccaaaaatacaaaaagaaaacctaag
aaaggtctcaatgctttggatattatgaaacaccaaccttatcagctcgatgcatcttta
tttacttttcaacctcctagtaataaggaaagccttgctattaagcagacgtcgaagttg
tccccttcaaagcaagctctacctttcagaccacctagtgctggctctcctactaatgcc
cgggcatcttcagtgtactccgtgccagcctacagttcgcaaccttcgttccagtcaaat
gcctctctcccagtaaatgaatcatattcacctacaagctactctgcattttctaagcca
gaaaccaccacatcttctttgtttactgctccgaggccaaaattttcagcaaagaaagct
ggcgtcactgcacaggaaagaagcagtggacgctcattatcacttcctgggagaccttct
tcattcatttctcgagccatgtctcctacttctcctcttatatttcagcctgctcctgat
tactttagcaagccagacacagcagccgacaggcctggcaagagaccgactccctgggaa
gcagcggcaagatcccctcttggcctagtggatgaagcttttgggccccaaaatatccag
gaatccattgctgctaacatagtatcagctgctcgcaggaaaacccttcctgagccacca
gatggatggaaacaaaaagtttcttatgagcctccagccccaagtggtagtgtagcctta
ttaggagggaagcaatcgggtattgtatcaccccccaaaagctccctgtctgccccaggt
gccaccacacgggctggctctcagctgaagtctccttactgcagtcagcggtccagaaca
gatcctgatataatgtccgtggattccaggtctgactattgcttgtcaacagctgattca
aactacaacccacagccaaggggatggaggcgtccaacatga
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