Larus michahellis (yellow-legged gull): 141743769
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Entry
141743769 CDS
T11135
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141743769 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmic03019
]
141743769 (NUP54)
Messenger RNA biogenesis [BR:
lmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141743769 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
141743769
NCBI-ProteinID:
XP_074444788
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All DBs
Position
5:10618221..10632983
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AA seq
529 aa
AA seq
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MRGPLSGGRHGRPPSAPFGVSSAAGGRPVPAELPSAGLWSPLVGGAGAFGGFGTTTTTAA
PAFSFSAPTNTGTSGLFGATQNKGFGFGTSFGTGTGTGLGSGLGTGLGFGCFGTQQQQTT
LGGGLFSQPAQAPAQSNQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNN
IAPVEFTQENPFCRFKAVGYSLMPNNKDEDGLVVLVFNRKETDIRSQQQQLVESLHKILG
GNQTLTVNVEGVKTMPDDQTEVIIYVVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLG
VSLSMARTELSPAQVKQLLQNPPAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLK
VQDQMTKQHQTRLDIISEDISELQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRK
SGYAIQADEEQLRVQLDTIQCELNAPTQFKGRLNELMSQIRMQNHFGTVRAEERYYIDAD
LLREIKQHLKQQQEGLSHLISIIKDDLEDIKLIEHGLNESIPIRGGVFS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccccctcagcggcgggaggcacgggcggcccccctcagcgccattcggcgtc
tcctcagcggcgggcgggaggccggtccccgcagagctgccctcggccgggctttggtcg
cctcttgtcggcggagccggtgcttttggaggatttgggacaactaccaccactgcggca
ccagcattcagtttttctgctcccaccaatacaggcaccagcgggctctttggtgctacc
cagaacaaaggctttggctttggtactagttttggcacaggaactggaactggcttgggt
agtgggttgggaacggggctgggctttggatgctttggtacccagcagcaacagaccaca
ttaggaggcggcttgttcagccagcctgctcaggcacctgcccagtcgaaccagctcatc
aacacggccagtgccctctcggctccgacactcttaggagatgagagagatgctattttg
gcaaaatggaaccagcttcaggccttctggggaacaggcaaagggtacttcaacaataac
attgccccagtggagttcacgcaggaaaaccccttttgcaggtttaaggctgtgggttac
agtttaatgcccaacaacaaagatgaagatggtctcgtggtcttggtctttaacagaaaa
gaaacagatattcgaagccagcagcagcagcttgtagaatcgctacacaaaattctgggg
ggaaaccagaccctcactgtcaacgtagaaggtgttaaaacgatgccagatgaccagaca
gaagtgatcatttacgttgttgagcgctcgcccaacggcacttcaaggagagttcccgca
acgaccctctacgcccactttgaacaagccaacataaaatcgtccttgcagcagctgggg
gtcagcctctccatggccaggacagagctgtccccagcacaagtcaaacagctcctgcag
aaccctcctgccggtgtcgatcctattatatgggaacaagctaaagttgacaatcctgat
cctgacaagcttattccggtgccaatggtgggtttcaaggaactgttgagaagattgaag
gtccaagatcagatgaccaaacagcatcaaactcgattagatataatatcagaagatatc
agtgagctgcagaaaaaccaaacgacaactatggcaaaaattgcgcagtacaaaaggaaa
ctgatggcgctttctcacagaacattacaggtgttaataaagcaggagatccaaaggaaa
agtggttatgccattcaagcagatgaagagcagcttcgtgtacagttagatacaattcag
tgtgaacttaacgcacctacacagttcaagggcagactgaatgagctcatgtcccagatc
aggatgcaaaaccactttggaacagtgcgggctgaagagcgctattacatagatgcagac
ctcttaagggaaatcaaacaacatctgaagcagcagcaagaaggcctgagtcacctaatt
agcattataaaggatgatttggaggacatcaaacttatagaacatgggctgaacgagagc
atccccatcagaggaggagtcttcagttga
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