Larus michahellis (yellow-legged gull): 141743929
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Entry
141743929 CDS
T11135
Symbol
PCDH10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
lmic Larus michahellis (yellow-legged gull)
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lmic04515
]
141743929 (PCDH10)
Cell adhesion molecules [BR:
lmic04515
]
Cadherins
Protocadherins
141743929 (PCDH10)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
141743929
NCBI-ProteinID:
XP_074445105
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Position
5:complement(19109283..19305193)
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AA seq
1074 aa
AA seq
DB search
MVVLFLFALLWMVEGALCQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTAPNSR
SPYLELNLETGVLYVNEKIDREQICKQSPSCLLHLEVFLENPLELFRVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRTYEITPNSYFSLDVQTQGDGNRF
AELVLDKPLDREQQAVHRYVLTAVDGGQPQQRTGTALLTIRVLDSNDNVPAFEQPVYTVS
LPENSPPGTLVLQLNATDPDEGQNGEVIYSFSSHISARARELFGIAPRTGRLEVSGELDY
EESSVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEAAAPGTVVA
LFSVSDRDSEENGQVQCELLQGDAPFRLKSSFKNYYTIVTEGPLDREQPGGDAYTLTVVA
RDRGQPPLSTSKSIQVRVSDVNDNAPRFSQPVYQVYVSENNVPGAYIYAVSATDRDQGAN
AQLAYSILESQIQGMSVFTYVSINSENGFLYALRSFDYEQLKEFSFQVEARDAGEEPQPL
AGNATVNIVVVDQNDNAPAIVSPLPGRNGTPAREALPRGAEPGYLVSRVAAVDADDGENA
RLTYSILRGNEASLFRMDWRTGELRTARRVPAKRDPQRPYELVIEVRDHGQPPLSSTAAI
QVVLVDGAAERPGGGGGLGAGAGAGGGGGGGGSGEHRPSRSGGDTSLDLTLILIIALGSV
SFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLGCCCCCPCCSRQARARKKKLSKSDIML
VQSSNVPSNPAQVPVEESGSFGSHHHNQNYCYQVCLTPESAKTDLMFLKPCSPSRSTDAE
HNPCGAIVTGYADQQPDIISNGSILSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSK
DSGHGDSEQGDSDHDATNRGQSSVSFSLMLAGMDLFSNCTEECKALGHSDRCWMPSFVPS
DGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHNTLERKELDGL
LSNTRAPYKPPYLKHGWQQSNPHPTSPSPSRGSHPLPGCTTTKALAISGSQSGL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgctattcctctttgccttgctctggatggtggagggggccctttgccagctc
cattacacggtgcaggaagagcaggagcatggcacgttcgtggggaatatcgccgaggac
ctgggcttggacattacaaaactttcggctcgccgcttccagacggcgcccaactcccgc
agcccttacctggagctcaacctggaaaccggggtgctctacgtgaacgagaagatcgac
cgggagcagatctgcaagcagagcccctcctgcctgctgcacctggaggtcttcctggag
aaccccctcgagctgttccgggtggagatcgaggtgctggacatcaacgacaacccgccc
tccttcccggagcccgacctgacggtggagatctcggagagcgcgacgccggggacccgc
ttccccctggagagcgccttcgaccccgacgtgggcaccaactccctgcgcacctacgag
atcacccccaacagctacttctccctcgacgtgcagacgcagggggacggcaaccgcttc
gccgagctggtgctggacaagcccctggaccgggagcagcaagcggtgcaccgctacgtg
ctgacggccgtggacggcgggcagccccagcagcgcaccggcaccgccctgctcaccatc
agggtgctggactccaacgacaacgtccccgccttcgagcagcccgtctacaccgtgtcg
ctgccggagaactcgccgccgggcaccctggtgctgcagctcaacgccaccgacccggac
gagggccagaacggcgaggtcatctactccttcagcagccacatctcggcccgcgcccgg
gagctcttcggcatcgcgccgcgcaccgggcggctggaggtgagcggcgagctggactac
gaggagagcagcgtctaccaggtgtacgtgcaagccaaggacctggggcccaacgccgtg
ccggcccactgcaaggtgctggtgcgggtgctggacgccaacgacaacgcgcccgagatc
agcttctccaccgtcaaggaggcggtgagcgaggcggcggcgccgggcacggtggtggcc
ctcttcagcgtctcggaccgcgactcggaggagaacgggcaggtgcagtgcgagctgctg
cagggggacgcgccgttccgcctcaagagctccttcaagaactactacaccatcgtcacc
gaggggccgctggaccgcgagcagccgggcggcgacgcctacaccctcacggtggtggcc
cgcgaccgcggccagccgccgctgagcaccagcaagtccatccaggtgcgggtgagcgac
gtgaacgacaacgcgccgcgcttcagccagcccgtctaccaggtctacgtgagcgagaac
aacgtccccggcgcctacatctacgccgtcagcgccaccgacagggaccagggcgccaac
gcccagctcgcctactccatcctggagagccagatccagggcatgtccgtcttcacctac
gtctccatcaactccgagaacggcttcctctacgccctccgctccttcgactacgagcag
ctcaaggagttcagcttccaggtggaggcccgcgacgccggcgaggagccccagccgctg
gccggcaacgccaccgtcaacatcgtcgtggtggaccagaacgacaacgcccccgccatc
gtcagccccctgcccggccgcaacggcaccccggcccgggaggcgctgccccgcggcgcc
gagccgggctacctggtgagccgggtggcggcggtggacgccgacgacggggagaacgcc
cgcctcacctacagcatcctgcggggcaacgaggccagcctcttccgcatggactggcgc
accggcgagctgcggacggcccgccgggtgccggccaagcgcgacccccagcgcccctac
gagctggtcatcgaggtgcgcgaccacgggcagccgcccctctcctccaccgccgccatc
caggtggtgctggtggacggggcggccgagcggcccggcggcggcggcggcctgggagcg
ggggcgggcgcggggggaggcggcggcggcggcggctccggcgagcatcgccccagccgc
tccgggggggacacctcgctcgacctcaccctcatcctcatcatcgccctgggctccgtc
tccttcatcttcctgctggccatgatcgtcctggccgtgcgctgccagaaggagaagaag
ctcaacatctacacctgcctggccagcgactgctgcctgggctgctgctgctgctgcccc
tgctgcagccggcaggcgcgggcccgcaagaagaagctcagcaagtcggacatcatgctg
gtgcagagctccaacgtgcccagcaacccggcgcaggtgccggtggaggagtcgggcagc
ttcggctcccaccaccacaaccagaactactgctaccaggtctgcctcacccccgagtcc
gccaagaccgacctgatgttcctcaagccctgcagcccctcccgcagcaccgacgccgag
cacaacccctgcggggccatcgtcaccggctacgccgaccagcagcccgacatcatctcc
aacggcagcattttgtccagcgagacgaaacatcagcgtgctgagctcagttatctagtt
gacagaccccgacgagtaaacagttctgcattccaggaagcagacatagtaagctctaag
gacagtggtcatggagacagtgagcaaggagacagtgatcatgatgccactaatcgaggt
caatcctctgtttctttttctctcatgcttgcaggcatggatctcttctccaattgcacg
gaggaatgtaaagcactgggccactcagatcggtgctggatgccttcctttgttccatct
gatggacgccaagctgcagattaccgcagcaatctgcacgtacctggcatggactccgtt
ccagacactgaagtgtttgaaacaccagaagcccagccgggggcagaaaggtccttctcc
accttcggcaaagagaaggcccttcacaacactctggagaggaaggagttggatggactg
ctgtctaatacacgagcgccttacaaaccaccatatttgaaacatgggtggcagcagagt
aatccccatcctacatcccccagccccagccgtgggtctcaccccttacctggatgcacc
actacaaaggcacttgccatctctggatctcaaagtggattataa
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