Larus michahellis (yellow-legged gull): 141744287
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Entry
141744287 CDS
T11135
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04010
MAPK signaling pathway
lmic04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141744287 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
141744287 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmic03000
]
141744287 (NFKB2)
Transcription factors [BR:
lmic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
141744287 (NFKB2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
141744287
NCBI-ProteinID:
XP_074445953
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All DBs
Position
6:51509913..51521608
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AA seq
968 aa
AA seq
DB search
MLGLDGLLRPASSSPAGGRPRADMDEQFQPCLDGIDYDFNFSSHMMEQKEPLMETVEGPY
LVIIEQPKQRGFRFRYGCEGPSHGGLPGASSEKGRKTYPTVKICNFTGMARIEVDLVTHS
DPPRVHAHSLVGKQCNEAGNCVAIVGPKDMTAQFSNLGVLHVTKKNMMEIMKEKLKQQKM
RNRSHQLTEAELREIELEAKELKKVMDLSIVRLRFTAYLRDSSGNFTLALQPVISDPIHD
SKSPGASNLKISRMDKTAGSVRGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPT
DVHKQYAIVFRTPPYHKPKIDRPVTVFLQLKRKRGGDVSESKQFTYYPVVEDKEEVERKR
KKVLPQFPQHFGGGSHMGGAGGGAGGFGSGGGEWGCLFPLPARAAMARSWGLPTPLWPHP
APPCFTGGNLSFPYSPGLAYNSIYSPGPHPVGGYQGGVQMKGPEMEGPGSDRQAPAESTY
CKELQKQAQLYQLWMLALARRNAHALLDYSITADPRMLLAVQRHLAASQDENGDTPLHLA
IIHEQTAVIKQLIEVIVSIPSQQIINISNNLQQTPLHLAVITKQPQVVQLLLQARADPTL
LDRYGNSLLHLALQAGDEEMLKTLLAHLGSAAPYLLHLPNFHGLLPVHLAVKAKSLACLD
LLVRMGADVNAVERQGGRTPLHLAVEMENLNMATHLVKKLGADVNSQTFAGNTPLHLAAG
LGSPTLTKLLLKAGADMLCENDEPVSPSSSEASSDTDVDPEEQELAMELGEPAPAMECGT
SPERPTQGHGQAGHRQRRCHTPLDLTRSQKVREILLQASQQGPEAELPTAPRPGNVLSLD
NEVLQGLEQLLNQDCSGSDWIELAKRLGLCSLVETYKDTPSPSVSLLRSYELAGGSLGGL
LEALDSMGLHKAVRMLHKTEALEKLQSTELKEDSAYGSESVEEEQAPALALKPGRGGELP
HSQQPQVH
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgctggggctggacgggttgctgagaccagcctcttcctccccggccggcggccggccc
cgcgcagatatggacgagcaattccagccctgcctggatgggattgactacgacttcaat
ttcagctcccacatgatggagcagaaggagcccctgatggagacggtggaaggtccctac
cttgtcatcatcgagcagccaaagcagcggggattccggtttcggtatggctgcgagggc
ccttcgcatggggggctgccaggagcatccagcgagaaggggcgcaagacctatcccacc
gttaagatctgcaacttcacggggatggcccggatcgaggtggacctggtgacacacagc
gaccctccccgcgtgcatgcccacagcctggtgggcaagcagtgcaatgaggctggcaac
tgcgtcgcgatcgtgggacccaaggacatgacggctcagttcagcaacttgggtgtgctc
cacgtcaccaagaagaacatgatggagatcatgaaggaaaagctgaagcagcagaagatg
cgcaacaggagccatcagctgacggaagcggagctgcgtgagattgagctggaggcaaag
gagctgaagaaggtgatggacctgagcatcgtgcggttgcgcttcactgcctacctccgt
gacagcagcgggaacttcacgctggccctccagcccgtcatttccgaccccatccacgat
agcaagtctccgggagcttccaacctgaagatctcacggatggataagacggcaggctca
gtgcggggaggggacgaagtctacttgctgtgtgataaagttcagaaagatgacatcgag
gtgcgtttctatgaggatgacgagaatggctggcaggccttcggggacttctctccgact
gatgtgcacaagcagtatgccatcgtcttccgcacgcccccctaccacaagcccaagatc
gaccgtcccgtcaccgtcttcctgcagctgaagcggaagcgggggggcgacgtgagcgag
tccaagcagttcacctactaccccgtggtggaagataaggaagaagtggagaggaagcgc
aagaaagtcctgcctcagtttccccagcactttggcgggggctcgcacatggggggcgcc
ggtgggggggctgggggcttcggctctggaggaggtgagtggggatgcctcttccccctc
cctgctcgggctgccatggcccggtcctggggtctccccactcccctctggcctcacccg
gcccccccttgcttcacaggcgggaacctcagcttcccctactcccccgggctggcctac
aacagcatctactcgcccggcccccaccctgtggggggctaccaggggggtgtgcagatg
aaaggccccgagatggagggtcccgggagcgacaggcaggcgcctgcggagagcacctac
tgcaaggagctgcagaagcaggctcagctctaccagctgtggatgctggcactggcccgt
cgcaatgcccatgccctgctcgactactccatcacggccgacccccgcatgctgctggcc
gtccagaggcatctggctgcctcgcaggacgagaatggagacacgcctttgcaccttgct
attatccatgagcagacagctgtgatcaagcagctgatcgaggtcattgtcagcatcccc
agccagcagatcatcaacatctccaacaacctgcagcagacgccgctgcatctggcagtc
atcaccaagcagccccaagtggtccagctcctgctgcaagcccgtgccgaccccaccttg
ctggaccgctacggcaattccttgctgcacctggcgctccaggctggcgatgaagagatg
ctgaagacgcttttggcccacctgggctcggctgccccttacctactccatctccccaat
ttccatggcctcctgcctgtgcatttggccgtgaaggcaaagagtttggcctgcctggac
ctgctggtcaggatgggagcggacgtgaacgcggtggagaggcagggtgggaggacccca
ctgcaccttgccgtggagatggagaacctgaacatggccacccacctggtgaagaagctg
ggagcagatgtcaacagccagaccttcgctgggaatacccccctgcacctggctgccggc
ctgggctcccccactctcaccaaactgctcctcaaagctggggcagatatgctgtgcgag
aacgacgagcccgtgagcccatcctcgtcggaggccagcagtgacacagatgttgaccct
gaggagcaggagctggccatggagctgggggagccagccccggccatggagtgcggcacc
agtcccgagcgccccacgcaggggcatgggcaggcagggcacaggcagcgccgctgccac
acgcccctggatctgactcggagccagaaggtgcgggagatcctgctgcaggcctcccag
cagggccctgaggcagagctgcccactgccccccgaccagggaacgttctgtcgctggac
aatgaggtgctgcaggggctggagcagctgctgaaccaggactgcagtgggtcagactgg
attgagctggccaagcgcctggggctctgcagcctggtggagacctacaaggacaccccc
tcgcccagcgtcagcctcctgcgcagttacgagctggcagggggcagcctgggggggctg
ctggaagcgctggactccatggggctccacaaggctgtgaggatgctccacaaaaccgag
gcgctggagaagctgcaaagcacagagctgaaggaagacagtgcctacggcagcgagtcg
gtggaggaagagcaggcgcctgcgctggccctgaagccagggcgggggggtgagctgccc
cacagccagcagccacaggtgcactga
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