Larus michahellis (yellow-legged gull): 141744331
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Entry
141744331 CDS
T11135
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
141744331 (SHOC2)
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Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_NLRC4
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
141744331
NCBI-ProteinID:
XP_074446102
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Position
6:62413360..62485266
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AA seq
582 aa
AA seq
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MSSNLGKEKDCKEKDPKVPSSKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSST
QPGVAFSVDNTIKRPNPATGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHMLPSAIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLSSLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIP
KSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaatctagggaaagaaaaggactgtaaagagaaggatccaaaagtcccatcg
tcaaaagaaagggagaaggaggccaaagcctctggaggatttgggaaagagagcaaagaa
aaggagcctaagaccaaagggaaagatgccaaagatggaaagaaggactccagtagcacg
cagcctggggtagctttttcagtggacaatacgataaaaagacctaatccagccacaggt
acccgcaaaaaatccagcaatgctgaagtgatcaaagagctaaataaatgccgggaagag
aattcaatgcgcttggacttgtccaagaggtctatacacatgcttccatcagctatcaaa
gagctaacgcagttaacagaactttatttatacagtaacaaactgcagtccctaccagca
gaggtgggctgtcttgtgaacctgatgacactggccctgagtgaaaactctcttaccagt
ttgcctgactctcttgataacttgaagaaactgcgcatgcttgacctgcggcataacaaa
cttagagaaatcccttcggtggtgtataggctaagctctctcgccactctttacctacgc
tttaatcgtataactactgtggaaaaggatatcaaaaacttgtcaaaactcaccatgctt
agcatacgagagaacaaaatcaagcaactacctgctgaaattggtgagttgtgtaacctc
ataacgctggatgtagcgcacaatcagcttgaacatcttccagaagagattggaagctgc
acgcagatcaccaaccttgacttgcagcacaatgagctcttggacctgccagaaaccata
ggaaatctgtccagtctaagtcgtcttggcctgaggtacaataggctgtcagcaattccg
aagtctttagcaaaatgcagtgaacttgatgaactgaacctggagaacaacaacatttct
actttaccagagggtcttttatccagccttgtcaaactgactagtttaacgctggccagg
aactgcttccagtcctatcctgtgggtggcccgtcccagttctccacaatctactctctc
aatatggagcacaaccgcatcaataaaatcccctttggaattttttctagagctaaagta
ttaagtaagctgaacatgaaggacaatcagctgacctctctccccttggactttgggact
tggactagtatggtagaactgaacttagcgactaatcagctcacaaaaatccctgaggat
gtatctgggcttgtttctcttgaggttcttatcttgtcaaacaatctactaaagaaactt
ccccatggaattggaaatctacggaaactccgagagctagatctagaggaaaacaaactg
gaatccttgccaaatgaaatagcttacctcaaggatctgcagaaattggttctgactaat
aatcagttgactacccttcccagaggtatcggtcaccttaccaatctgacgcaccttggg
ctcggagagaatcttctcacacaccttcctgaggaaattggtacactggagaatctggaa
gaactgtatttgaatgacaaccccaatctgcacagccttccctttgagctggctctttgc
agcaaactgtcaataatgagtattgagaactgcccgctcagccaccttccacctcagatt
gttgcaggaggaccctccttcatcattcagttcctaaaaatgcagggaccataccgggcc
atggtctga
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