Larus michahellis (yellow-legged gull): 141744500
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Entry
141744500 CDS
T11135
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04110
Cell cycle
lmic04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141744500 (SMC3)
04114 Oocyte meiosis
141744500 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmic03036
]
141744500 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lmic00535
]
141744500 (SMC3)
Chromosome and associated proteins [BR:
lmic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141744500 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
141744500 (SMC3)
Proteoglycans [BR:
lmic00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
141744500 (SMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
141744500
NCBI-ProteinID:
XP_074446658
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All DBs
Position
6:62206297..62232343
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctcaaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
agactggctttgttacatgaaggtacaggtcctcgtgtcatttcagcgtttgtggaaatt
atttttgacaattcagacaacaggttaccaattgataaagaggaagtctcacttcgcaga
gtcattggagccaagaaggaccagtatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaatcttcttgaaagtgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcaaagactgaagttactaaga
gaagtagctggtaccagagtgtatgatgaacgtaaagaagagagtatttcactaatgaaa
gaaacagagggcaagcgagagaagatcaatgagttgttgaaatacattgaagagcgactg
cataccctagaagaggagaaagaggagctggctcagtaccagaaatgggataaaatgagg
agagcattagaatacactatttataatcaggagcttaatgaaacccgagctaagcttgat
gagctttctgccaaacgagagacaagtggagagaaatccagacagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagacaaag
atttcggcaatgaaagaagagaaagaacaacttagtgctgaaagacaggagcaaattaaa
cagaggactaaattagagctgaaggcgaaagacctgcaggatgaattagctggcaacagt
gaacaaaggaaaagactattaaaagagaggcaaaagcttcttgagaaaattgaggagaag
cagaaagaattagcagaaacagagccgaaattcaacagtgtaaaagaaaaagaagagagg
ggaattgctagacttgcacaggctacacaggaaagaacagatctttatgcaaaacaaggt
cgaggaagccagtttacttccaaagaagaaagggataagtggataaagaaagaactgaaa
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggattta
gaggatacagaggcaaacaaggagaaaaatttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagagctggacagaaaatactatgaagtgaaaaat
aaaaaggatgaactacagagcgaaagaaattatctatggagagaagagaatgcagaacaa
caagctcttgctgcaaagcgggaggatttagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaacggtatagacagcataaacaaagttttggaacacttccgt
cgaaaaggcataaatcagcatgttctaaatggctatcatggcattgttatgaataacttt
gaatgtgaaccagctttctacacctgtgttgaagttactgcagggaacaggttgttttat
cacattgtggattctgatgaggtcagtacaaagatcctaatggaatttaacaaaatgaac
cttcctggagaagttactttcctccctctgaacaagctggatgttagagatactgcttat
cctgagactaatgatgctattcctatgatcagtaaactgagatacaatccacgatttgac
aaagctttcaaacatgtttttggaaagactctaatttgtcgtagcatggaagtgtctacc
cagctggccagagctttcactatggattgtattactctggaaggtgatcaagtcagccat
cgtggtgctttgactggaggttattacgacacaaggaagtctcgtcttgaattgcaaaaa
gatgttagaaaggcagaagaagaacttggtgaacttgaagcaaaacttaatgagaattta
cgccgaaacattgagaggattaataatgagattgaccagctaatgaaccaaatgcagcaa
attgagacacagcagagaaagttcaaagcctctcgagacagtattttgtcagaaatgaaa
atgctgaaggagaaaaggcagcagtctgaaaagacatttatgcctaagcaacgcagtttg
cagagcttggaggcaagtttacatgcaatggagtcaacgagagaatcattaaaagcagaa
ctggggactgatttattgtctcagctcagtcttgaagaccagaaacgtgtggatgctctc
aatgacgaaattcgacaactacagcaagaaaacaggcagcttttgaatgaaaggattaaa
ctagaaggcattatcacaagagttgaaacataccttaatgagaacctgagaaaacgctta
gaccaagtggaacaagaactgaatgagcttcgagaaacagaaggtggcacagttcttact
gccacaacatcagaacttgaggctatcaacaaacgagtgaaagatacactggcacggtca
gatgatctggataattctattgacaaaacagaagcaggaattaaagagcttcaaaagagc
atggaacgctggaagaacatggagaaggagcatatggatgctattaaccacgatacaaaa
gaacttgaaaaaatgactaacaggcaaggcatgctcctcaagaagaaagaggaatgcatg
aagaaaatccgagagttgggttcacttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaaactggagcagtgtaatacggaactgaagaaatacagt
catgttaataaaaaagctttagatcagtttgtgaatttctcggagcagaaggaaaaatta
ataaaaagacaagaggaacttgacaggggctacaaatccatcatggagctgatgaatgtc
cttgagctcagaaagtatgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtattccagaagttagtccctggtgggaaggccacgttagtgatgaagaaagga
gatgtggagggcagtcagtcccaggatgaaggtgaaggcagcactgagagtgaaagagga
tctggatctcagagcagcgttccatctgtagaccagttcactggagttggcataagggta
tcgttcacagggaagcagggtgaaatgagagaaatgcagcaactttcaggtggacagaaa
tccttagtggccctagccctgatatttgctatccagaaatgtgatccagctccattttac
ttatttgatgaaatcgaccaagccttggatgctcagcacagaaaagctgtctcagatatg
attatggaactagctgaacacgctcagtttattacaacgacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaaattcagaaacaaggttagtcatattgatgtg
atcacagcagaaatggccaaagactttgtagaagatgacaccacgcatggttaa
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