Larus michahellis (yellow-legged gull): 141744595
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Entry
141744595 CDS
T11135
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141744595 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lmic04121
]
141744595 (TRIP12)
Enzymes [BR:
lmic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
141744595 (TRIP12)
Ubiquitin system [BR:
lmic04121
]
Ubiquitin ligases (E3)
HECT type E3
141744595 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
141744595
NCBI-ProteinID:
XP_074446987
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All DBs
Position
6:complement(24129363..24208393)
Genome browser
AA seq
2070 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPENRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQEGDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHTKTKRRHLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSGSAVESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSSAVASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSKTSGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASKQSSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLL
QMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEML
SRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQ
RLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFI
MVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTS
LICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQV
GEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQ
LMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHA
VSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTS
PPKVCTNGSGTLGTATTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKR
KRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNM
EPARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQR
LCTATEQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDTVSR
DIRLKRFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSG
NGTGSSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYL
VVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQA
VRQYSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGSKDCVGGKRGRAQTA
PTKTSPRNSKKHDELWHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLLRVLHAIS
RYWYYLYDNAICKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFF
PFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQA
ESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKG
SQEGTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPF
YKWMLRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTM
NGCSVEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFR
DGFESVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEI
LSSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNY
LKLPDYSTIEIMREKLLIAAREGQQSFHLS
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagaatagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaagaaggagatccagagagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctagaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggaaactaacaagccacatactaaaactaagagaagacacttagaccaagaa
cagccgaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
ggttcagcagttgaatcaactggcgctgaagagaagtcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttctacatcatcctcctcctcttctgctgttgcctctgcttcttctactgttcctcag
ggtgccagagtgaaacagggaaaggaccagaataaggctagacgttcccgttctgcatcc
agccccagtccaagaaggagtagcagggacaaagaaccgagtaaaacaagtggctcttca
aagtttgactgggctgctcgattcagcccaaaagtcagtctgcctaaaacaaaactgtct
ctaccaggctcttccaagtcagagacatcaaaacctggaccttcaggactacaggctaag
ctagcaagtctaagaaaatccacaaagaagcgcagtgaatcaccacctgctgagctcccc
agtttgcggcggagcacacggcaaaagaccacgggctcctgtgctagcaccagtcggcga
ggctctggcctgggcaaaagaggagcagctgaagctcgccgacaggagaagatggctgat
cctgacaacaaccaggatggagttaactcttcagctgcgcgtacagatgaggctccccag
ggagctgcagcttctagttctgttgctggggctgtaggtatgacaacctctggagaaagt
gagtcagatgattctgagatgggaagactacaagctctattagaggctaggggtcttcct
cctcacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattgga
agtggagctagtaagcaaagttctaaagcccaacagcttttacaaggtctccaagccact
gatgaaagtcagcaacttcaggcagtgattgagatgtgccagctgttggtcatgggcaat
gaagaaacattaggaggatttccagtcaagagtgttgtaccagctttgataacactgctg
cagatggagcacaactttgacattatgaaccatgcatgtcgggccttaacatatatgatg
gaagcacttcccagatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaag
ctgcaagttattcagtgcattgatgtggcagagcaggcgcttacagcgctggagatgtta
tctcgcagacatagtaaagccattctgcaggcaggtgggttggcagactgtttgctgtat
ctggaattcttcagcataaatgcacagaggaatgcgctagctattgctgccaactgctgc
cagagtataacacctgatgagtttcactttgtggcagactctttgccactgcttacacaa
aggttaacgcatcaggacaaaaagtctgttgaaagcacttgtctctgttttgcacggcta
gtggacaacttccagcatgaggagaacttgctccagcaggttgcttccaaggacttgtta
acaaatatccagcaactcttggtagtgacgcctcctatcctgagctcaggaatgttcatc
atggtggtgcgcatgttttccttaatgtgctccaattgtcctacacttgcagtccaactt
atgaagcaaaatattgcagaaacgcttcatttcctcctttgtggagcctcaaatgggagc
tgtcaagaacaaattgaccttgttccacgaagtcctcaagaactttatgagcttacttct
cttatctgtgaactgatgccttgcctgccaaaagagggaatctttgctgttgatactatg
ctgaagaaaggaaacgcacaaaatacagatggtgcgatatggcaatggcgagatgacagg
ggcctttggcatccctataacaggattgatagtcgaataatagaggcagctcatcaggtt
ggtgaggatgaaataagcctgtctacgcttgggcgtgtctatactattgattttaactct
atgcagcaaataaatgaggatactggaacagcacgtgccattcagcgaaaaccaaaccct
ttagccaatacaaacactagtggacattcagaattgaagaaggatgatgctcgagcacaa
ctaatgaaagaggacccagaactggcaaaatcctttatcaaaacattgttcggtgttctt
tatgaagtatatagttcttcagctggacctgctgttagacacaagtgccttagagcaatt
cttaggataatttattttgctgatgctgaacttctgaaggatgtgctgaaaaaccatgct
gtttctagtcatattgcctccatgctgtcgagtcaagaccttaagatagtagttggagcc
ctgcagatggcagagattttaatgcaaaagttacctgacatttttagtgtttacttcaga
agagaaggggtgatgcatcaagtgaaaaacttagcagagtctgaggctttgttaacaagc
ccaccgaaagtatgcactaatggatcaggaacgctgggtaccgctacaacgataagtact
ggaacagcaactgctgccagtaatgcagcagcggatttgggctctcctagcttacaacac
agccgggaggattctttggatcttagcccacagggacgactgagtgatgttctaaagaga
aaaagattgccaaaacgagggccaaggagaccaaaatactctcctccaagagacgatgac
aaagtagacaatcaagctaaaagccctacaactactcaatctcctaaatcttccttcttg
gcaagtttaaatcccaaaacgtggggaagattaagcacacagtccaacagtaataatatg
gaaccagcacgaacagcaggagtaagtggtcttgcaagggctgcttccaaggataccatt
tccaataacagagaaaaaattaagggctggattaaggagcaagcccataaatttgtagaa
cgttattttagttctgaaaacatggatggaagcaatcctgcactaaatgtattacagaga
ctttgcactgcaactgaacaactcaacctccaggtggatggtggaacagagtgccttgta
gaaatccgtagcattgtctcggagtctgacgtctcctcatttgaaatccagcatagtggg
tttgttaaacaactgctgctttatttgacatctaaaagtgagaaagatactgtaagcagg
gatatcagattgaaaagatttcttcatgtatttttttcttctccacttcctggagaagaa
ccccttggaagattagagccattagaaaatgcacctttgttggcgttagtccataaaatg
aacaattgcctcagtcagatggaacagtttcctgtcaaagtgcatgacttcccaagtgga
aatggaacagggagcagtttttctcttaacagaggatcccaagctttaaaattcttcaat
acacaccaattaaaatgccaactgcaaagacatccagactgtgctaatgtgaaacagtgg
aaaggtggacctgtgaagattgacccgctggctttggtacaagccattgaaagatacctt
gtagttagaggctatggaagagttagagaagatgatgaggatagtgatgatgatgggtca
gatgaagaaatagatgaatctttggctgctcaattcttaaattcagggaatgtgagacat
agactgcagttttacattggagatcacttactgccatacaatatgactgtgtatcaagca
gtcaggcagtacagtttgcaagctgaggaggagagggagtctacagatgatgaaagcaac
ccattaggaagagctgggatttggacaaaaacgcatacaatttggtacaaacctgtgcga
gaggatgaagatggtagtaaggactgcgttggtggtaaaagaggaagagcacaaactgct
cccacaaaaacctcccctagaaattctaaaaagcatgatgaattgtggcatgatggtgtg
tgcccttcggtattaaatcctctagaagtttacctcatatctactccacctgaaaacata
acatttgaagatccctcattagacgttattcttcttttgagagttttacatgctatcagt
cgatactggtattacttgtatgataatgcaatctgcaaggagataattccaacctcagag
tttatcaacagtaaactgacagcaaaagcaaacaggcagcttcaggatcctttggtaatt
atgacaggaaacataccaacctggctgacagaacttggaaaaacatgcccgtttttcttt
ccatttgatacccgtcaaatgctgttttatgtaactgcttttgatcgtgatcgagccatg
caaagactgctggatactaatccagaaatcaatcaatcagattctcaggatagcagagtg
gcaccacgactggacaggaaaaaacgcactgtgaacagagatgagctgttgaaacaggca
gaatctgtgatgcaggatctaggcagttcaagagccatgttggaaatccagtatgagaat
gaagttggcacaggccttggccccacgctagagttctatgcacttgtatctcaggaacta
cagagagcagacttaggcctttggaggggagaagaagtgactttagccaatccaaaagga
agccaggaaggtaccaagtatatccataaccttcaaggcctttttgcacttccttttggt
agaacagccaagccagctcacattgcaaaagttaaaatgaagttccgctttctgggaaaa
ctaatggccaaggcaatcatggattttagactggtggaccttcctcttggacttcctttt
tataaatggatgctacgacaggaaacttccttgacatcacatgatttgttcagtattgat
ccagtagtcgccaaatcaatatatcaccttgaagatattgtaagacaaaagaaaagactt
gaacaggacaaaacacagaccaaagaaagtctacagtatgcattggaggctctgacaatg
aatggctgctcagtggaagatttagggctggacttcacacttcctgggtttcctaatata
gaactgaaaaaagggggaaaagatacaccggtcaccatccacaatttagaggagtacctc
agattggttatattctgggcactaaatgaaggtgttgccagacagtttgactcattcaga
gatggatttgaatcagtcttccccctcagtcatcttcagtacttctatcctgaggagttg
gagcagcttttgtgcggcagtaaaacggacacttgggatgcaaagactttaatggaatgt
tgcaggccagatcacggttatacacatgacagtcgagcagtgaagtatctctttgaaatt
ctcagtagctttgatagtgagcagcaaagactgtttcttcagtttgtgacgggtagcccc
agactgcctgtaggaggctttcgaagtttgaatcctccattgacaattgtgcgcaagaca
tttgagtctacagagaatccggatgatttcttgccctcagtaatgacttgtgtgaactat
ctcaaattgccggactattcaactattgagataatgcgtgaaaaactattgatagctgca
agagaagggcagcagtcattccatctgtcctga
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