Larus michahellis (yellow-legged gull): 141744641
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Entry
141744641 CDS
T11135
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141744641 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lmic04990
]
141744641 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
lmic04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
141744641 (LDB3)
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
141744641
NCBI-ProteinID:
XP_074447116
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All DBs
Position
6:42782462..42911924
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AA seq
811 aa
AA seq
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MAYSVTLNGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMNQGDLVVAIDGVNTDSM
THLEAQNKIKSASHNLSLTLQKSKRPVPVSTTAPRIDSPRAVIPHQKEPAWEINGNRTTF
SPLTNTATGPMSSILETNGTFSGYLNKQEISFSNSSSYLKTTTVRTSMSSQSVTPDISPA
KSNLGSKVSPVLTDGNSPLQQLSPARQYNNPIGLYSAETLREMAEMHKLSLNRRASQGGL
PRGTLPLKDPHVDSASPVYQAVLKTQNKPEDETEDWSRRSANLQSRSFRILAQMTGTEYM
QDPDEEALRRSRDKENVAAASENRPTATTHAPQYVTSSIWHSPKSFTTDANTDNAKPVAS
KGSLRLGAGTSQREASFVTTGQKVPLTSSSNQSTPVEHAPVSTSSASAPAPHASAHQPAT
AAQNTASLMTPPATTSVAQESFSSSFQRVLAAPSSLSQPKPSHGSKNMSLAASTISSAIS
SQSSFNRHSSTSISYQSKKRNANQPYTPMPVSGSYGESPAASATSKPRVVTTASIKPSVY
QPAPAPVHSYTPANAEPASRPPWVTDDSFSQKFAPGKTTTTVTKNILPRGASVPSPASTS
AYPSPVSTSSQAPAIARGTVQRAERFPASSRTPLCGHCNSIIRGPFLVAMGRSWHPEEFN
CAYCKTSLADMCFVEEQNSVYCERCYEQFFAPTCARCHTKIMGEVMHALRQTWHTSCFVC
AACKMPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDYPVEAGDKFIEALGHTWHDTCFI
CAVCHVNLEGQPFYSKKDKPLCKKHAHAINI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagcgtgactctgaatggacctggaccctggggtttccggctgcaagggggc
aaggacttcaacatgcccttgactatctccagaatcactcctggcagcaaggcagcacag
tcacagatgaaccaaggggaccttgtggtagccattgatggagtcaacactgacagcatg
acccacttagaggcccagaacaagatcaagtcagccagccacaacctgagcctcactctt
cagaaatctaaacgaccagtgccagtttcaaccacagcacctagaattgactctcccagg
gctgtaattcctcaccagaaggaacctgcttgggaaatcaatggcaacagaacaaccttc
agtcctctaactaacacggcgactgggcctatgagtagtattttagaaaccaatggaacg
ttttcaggctacctcaacaagcaagagatcagcttttcaaatagctcttcctacttaaag
actaccacagttagaacttccatgtcctctcagtctgtgactcccgacatttcacctgca
aagagtaacctaggttccaaagtaagccccgtcttgactgatggcaatagccctttacag
cagctgagccctgcaaggcagtataacaaccccattggcctttactcagcagagactctc
agggaaatggctgagatgcataaattaagtctcaaccgaagggcttcacaaggcggactt
cctagaggtacccttcctcttaaagatcctcacgtagacagtgcctctccggtgtatcag
gctgtgcttaaaactcagaacaagcctgaagatgaaaccgaagactggagtcgccgttct
gccaatttgcagtctaggtctttccgcatcctagcccagatgactggaacggagtacatg
caagacccagatgaagaagccctgaggaggtcaagagacaaggaaaatgttgcagcagca
tcagaaaacaggcctacagctactacacacgcgccacagtatgtgacctcaagtatttgg
cattctcctaaatcattcaccacggatgccaacactgacaatgctaagccagtggcttcc
aagggctctctgaggcttggagcgggtacaagtcagagggaggccagtttcgtcactact
ggccagaaagtccctctcacttcatccagtaatcaaagtacccctgttgagcatgctccg
gtgtctaccagttctgcctctgctcctgcaccacatgcttcagcacatcagcctgctact
gctgctcaaaatacagccagtctgatgacaccaccagcaaccacctcagtagcgcaagag
tctttctcatcctccttccaaagagtgcttgcagcccccagctctctttcacagcctaag
ccttcccatgggtccaagaacatgtccttagcagcttccaccatttcatctgctatctca
tctcagtctagtttcaaccggcattcttccacctccatcagctaccagtcaaagaagaga
aatgcaaaccagccatatacaccaatgccagtttctggaagctacggtgaaagtcctgct
gcttctgctacttcaaaaccaagagttgttactactgccagcataaagccctctgtctac
cagccagcaccagcaccagttcattcctacacgcctgccaacgctgagcctgcaagtcgc
cctccctgggtaacagatgactccttttcccagaaatttgcacctggaaaaaccaccacc
actgtcacaaagaacatcctaccaagaggtgcttcagtaccatctcctgcctcaacatct
gcttacccatctccagtttcaacttcttcacaggctcctgcaatagcccggggaacagtt
cagagggctgagcgttttccagctagcagccgaactcctctctgtgggcactgtaacagc
ataattcggggtcctttcctggtagccatgggtcgctcttggcacccagaagaattcaat
tgtgcttactgcaagacatccttggctgatatgtgctttgtggaagagcagaatagtgtg
tactgtgaacgctgttatgaacagttctttgcaccaacctgtgccagatgccacactaag
atcatgggggaagtgatgcatgccctaagacagacttggcacacaagttgctttgtctgt
gctgcttgtaagatgccgtttgggaatagcctctttcacatggaggatggggaaccttac
tgtgagaaagattatattgctttgttcagcacaaaatgccatggctgtgattatcctgtt
gaagctggagataaattcattgaagctcttggacacacttggcatgatacctgcttcatt
tgtgctgtatgccatgtgaatttggaaggtcagccattctactccaagaaggataagcca
ctgtgcaagaagcatgcccatgccatcaatatttaa
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