Larus michahellis (yellow-legged gull): 141745229
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Entry
141745229 CDS
T11135
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141745229 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lmic04131
]
141745229 (VPS8)
Membrane trafficking [BR:
lmic04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
141745229 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_11
Beta-prop_WDR5
Beta-prop_WDR3_1st
zf-RING_2
WDR55
Beta-prop_HPS5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
141745229
NCBI-ProteinID:
XP_074448676
LinkDB
All DBs
Position
6:12357086..12438877
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AA seq
1390 aa
AA seq
DB search
MEAVPEQGGCPAGAEAEPCPEPPAHRLSVAELDRELDSRSELIDDKEFDIPQVDTPPTLE
SILNETDDEEESFILEDPFLLNVDNTDTHSYDTSSVASSDSGDRTHLKRKKKLPDTLSLH
GSVIRLSLLKGISAQIVSAADKVDAGLPTAIAASNLIAVGTSHGLALIFDQNQALRLCLG
STAVGAQYGAVSALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHPPGTAILHIK
FTDDPTLAICNDSGGSVFELSFKRVMGVRTCESRCLFSGSKGEVCCIEPLHAKVELRDHP
ITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVQNSVNPMLAF
CRGDVVHFLLVKRDDTGAIHVTKQRQLHLHYDLINFTWINSRTAVLLDSVEKLHVIDRQT
QEELETIEISEVQLVYNSSHFKSLATGGNVSEALALVGEKACYQSISSCGGQVFYLGTKS
VHVMTLRSWRERVDHLLKQERLTDALALAWSFYEGLSGDTSKRKAVIADRMVEILLHYAD
RTLKKCPDQGKIQVMEQHFQDVVPVIVDYSLLLQRTDLLFNQIYDKMSENSVAKGVFLEC
LEPYILSDKLMGITAQVMKDLLLHFQDKNRLENLEACIVHMDITSLDIQQVVLLCWENHL
YDAMIYVYNSGMNDFISPMEKLFKVIAPPLNAGKSLTDEQVVMGNKLLVYISCCLAGRAY
PLGDIPEDLVPLVKNQVFEFLIRLHSTEGSVDEEVYPYVRTLLHFDTREFLNVLALTFED
FKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPNNTLFVNRTLFDQ
VLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEETRLIQMAEKAEFYQICEFMYERQLR
YDKIIGCYLRDPVRKEEVFNYIHNILSMPGYSAEEKQSVWQKALEHIEELLLLSPCKAAD
LVAIHFSEQIESIITNLQDQFLLFQFLRSLLDPREGINQDLIHLPPCVTEQFIELLCQYS
PDQVLETLKVLEYCRLEETIQITQKHQLHEASSYLLEKKGDIHGAFLVMLERLQSKLLTL
TQEDESSAELPLLESIEDTLMKTIALCQRNSHNLDQQQQEALWFPLLEAMMSPQKLSGSS
QCRYSESLKSLTMQVLNNMAAFIALPSILQRILQDPVYGKGKLGEIQGLVLGMLDTFNYE
QTLLETTTSLLNHDLHWSLCNLRASVTRGLTPKQDYCCVCLQQYKRRQETADEIIVFSCG
HLYHSLCLLSKECGTVTKGLMRWMCYKCNSSNKGGKLSENFSELKKGSGASLAQTSSETL
LDPQQIQAFDQLCRLNRGTSRLALLTELSRSHGGEKHGLLSVSQGDPATSSVFQNENFQL
HLAPPPLAED
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggtcccggagcagggcggctgcccggcgggagcggaggccgagccctgcccg
gagccgcccgctcaccggctgagcgtggcggagctcgaccgcgagctggactcccgcagc
gagctgatcgatgacaaagaattcgacattcctcaagttgatacccctccaacactggag
agcatcttaaatgagactgatgatgaagaggagtctttcattttggaagatccctttctc
ttgaacgttgataatacagatacgcactcctacgacacatcttctgtagcaagctctgac
agcggggaccggacacacctcaaaaggaagaaaaaactcccagatactctctcactccat
ggatcagttatacggctctcgcttctgaaagggatttctgcccaaatagtgtctgccgca
gacaaagtggatgctggcttgcccactgcaattgcagcatcaaatctgatagcagtgggg
acttcccatgggttagcactgatatttgatcaaaaccaggctcttcggctttgtctgggc
agcactgctgttggggcccaatatggggctgtctctgctctcagcatcaacaacgactgt
tcaaggctcctgtgtggctttgcgaaaggacagatcacgatgtgggatctggccagtggg
aagctgctacgatcaataacagatgcccacccaccaggaacagccattttgcacatcaag
tttacagatgacccgacgcttgcaatttgcaatgacagcggaggctccgtatttgaactg
tcatttaagagggttatgggagtgagaacctgtgagtctcgatgtctcttcagtggctca
aagggggaagtttgctgtattgaaccgttacacgcaaaagttgagctgagagaccatcct
atcacccagtattccctgctggccatggcctccctaacaaagatactggttattggcctg
aagccatctctgaaagtgtggatgacttttccctatggtcgtatggacccttctagtgtc
cctcttctggcgtggcactttgtggctgtacagaactctgtgaaccccatgcttgcattt
tgtcgaggagacgttgttcattttcttctggtaaagagagatgatactggtgcaatacat
gtcactaagcagaggcagcttcatctacactatgacctcatcaactttacttggataaac
tcacggacagcagtgcttctggacagtgtggagaaactgcatgttatagatcgtcagacg
caggaggagctggagaccatagagatctcggaagttcagctagtctacaacagcagccac
ttcaaatcgctggctacgggaggcaacgtcagcgaagccctggcattggttggagagaaa
gcttgttatcagtccatcagcagctgtggcggtcaggtcttttaccttggaacgaagtct
gttcacgtcatgacattgagaagctggagagagagagttgatcacctgctgaaacaagag
cgtctcactgatgccctggctctagcttggtctttttatgaaggcttgtctggggacacg
agcaagcggaaagcagtcattgcagaccgaatggttgaaatccttctccattacgccgat
cggactttgaagaaatgtcctgaccaaggaaaaatccaggttatggaacaacattttcag
gacgtggtgcctgtcatagttgattacagtctcttactccagcgcacggatctgttattt
aaccagatatatgataagatgagtgagaattctgtagctaaaggcgtctttctggagtgc
ttggagccatatatcttaagtgataagctgatgggaatcacagctcaagtgatgaaagac
ttgctgcttcacttccaagacaagaacaggttggagaacttggaagcctgcattgtgcat
atggatatcaccagcttagacatacagcaggtagttcttctatgctgggaaaaccatctc
tatgatgccatgatctacgtctacaacagtgggatgaatgacttcattagtcctatggag
aagctgttcaaagtcattgctcctccactgaacgctgggaagtctctcacagatgagcag
gtggtaatgggcaacaagctgcttgtatatataagctgctgcttggcaggccgggcatat
ccattgggcgatattcctgaagatctggtacctttggttaaaaatcaggtctttgaattt
ctcatccggctgcattcaactgagggatccgtggacgaagaggtctacccttatgttcgt
accttgctgcacttcgatactcgggaattccttaatgttcttgctctgacttttgaagac
tttaagaatgacaagcaagctgtggaatatcaacagagaattgtggacatacttctgaaa
gtcatggtagagaattctgacttcaccccatcgcaggttggctgtctctttaccttcctt
gcccgtcagctcgccaagcccaacaacacgttgtttgtgaacaggacgctttttgatcag
gtccttgagtttctctgcagtccggatgatgactcccgccattcggagaggcagcaggtc
cttttagaattgctccaggcaggagggatagtacagtttgaagagacccgtcttatccaa
atggcagaaaaagcagaattctatcagatttgcgagttcatgtatgaacgacagcttcgc
tatgacaaaataattggctgttacctgcgtgatccagtgagaaaagaagaagttttcaac
tatattcacaacatcctgtccatgcctggctacagcgctgaagaaaagcagtcggtgtgg
cagaaagctttggaacatatagaggagttgctgttgctgagcccgtgtaaagcagccgac
ttggtagccattcactttagtgagcagattgagagcatcatcacgaacctccaggaccag
tttttactcttccagtttctgaggagtctccttgatccgagagaaggcattaaccaagac
ctgatccacttaccaccctgtgtcacggagcagttcattgagctgctgtgtcagtacagc
ccagaccaggttttggagacgcttaaagttctggaatactgcagactggaagaaaccatc
cagataacccagaaacatcagctccatgaagcttcttcatatttactggagaagaaggga
gatatccacggtgcctttttggttatgcttgagcgactgcagagcaagttgctgacgctt
acacaagaggatgaaagctcagctgaactccccttgctagaaagcattgaagatacctta
atgaaaacaattgccctttgccagagaaattcacacaatttagaccagcaacagcaagag
gccctgtggtttcccctgctggaggctatgatgtccccacagaaattatctggttcttca
cagtgtcgatactctgaatctttgaagagtttgacgatgcaagtgctgaacaacatggct
gcatttattgctcttccttcaatcctgcagagaattctacaggatccagtttatggaaaa
gggaaacttggagaaattcaaggtctcgtcctgggaatgctggacacttttaactatgaa
caaacccttttagagacaactacgagtcttttaaaccatgatctccactggtccctgtgt
aacctaagagcttctgtcactagagggcttaccccaaagcaggattactgctgcgtttgt
ctacagcagtacaaaagaaggcaagaaactgctgatgaaatcattgttttcagctgtggc
cacttgtaccattcgctgtgtctgctgagtaaagagtgtgggacggtaaccaaaggcctg
atgaggtggatgtgctacaaatgcaactcaagtaacaaaggaggaaaactgagcgagaac
ttctcagagctaaaaaaaggaagtggagcatccttggcacagacaagttcagagactctg
ttggatcctcagcaaatccaagcttttgaccaactctgccgactgaaccgaggaacctcc
agactagctctcctgacagagctgtctcgtagccatggcggtgaaaagcacgggctgctc
agcgtttcccaaggtgacccggccaccagcagcgtcttccagaatgagaacttccagctc
catctggccccccctccgctggctgaagactag
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integrated database retrieval system
