Larus michahellis (yellow-legged gull): 141745446
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Entry
141745446 CDS
T11135
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X1
KO
K07603
collagen type XVII alpha
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141745446 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF5006
DUF4869
Motif
Other DBs
NCBI-GeneID:
141745446
NCBI-ProteinID:
XP_074449306
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Position
6:complement(60053329..60095165)
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AA seq
1558 aa
AA seq
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MDSVTKKTRQDGSEVTERLITETVTTRLTSLPPKGGSSSGLKTSSHTGGSGVEKRSYTHG
SSYVTSSGSGRLNSSSSTSGYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSS
PEFPRKEFASASTRGRSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRS
PSSTLPIPKKAVVETKMVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNSS
SLINAMSHSTGSVFGVPNNLAPSNHTLNAGLSTSSTVFGVQNNLSPSASSLTQNVTAASA
AYGMKNTSQNNTAASTGVSASAGGTVLTSQGDDILRKDCKFLLLEKENAPAKKEMELLIM
TKDSGKVFSASTTGLNGGSFVEDTLKKEKQGFSSSYATDTGLKSDANGALKSVPTRDKAT
YAEIRNGDAGGAIGSAPSWCPCRSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRKLK
SRVENLEKINGGLLTINQGNPKIEKDVSRVDFLHGISPSSTFPYENEESVWLMVKSRLNK
EVERGYFRGERGEPGEKGDMGMQGPRGERGLPGVPGIPGPIGHQGPEGPKGQKGSMGDPG
MEGPMGQRGREGLPGPRGEPGPPGFGEKGDRGAVGEPGPPGPPGPPGSAGLKGLMGSPGP
QGPPGPPGLQGFRGEAGLPGAKGEKGASGAPGPKGDQGEKGSRGMTGEQGSRGMPGPPGE
PGAKGPVGQAGRDGQPGEKGEPGLMGMPGVRGPPGPTGDAGQPGLTGPQGPPGLPGNPGR
PGAKGETGAPGKVISAEGSSTIALPGPPGPPGPAGPTGPPGVPGPVGPAGLPGQQGPRGE
KGSPGEAVIETIKTEVSSLASQMMADLQGRAGPPGPPGPPGESVQGPPGPRGPPGEGLPG
PPGPPGRPSSSMSTSETFLTGPPGPPGPPGPKGDQGERGPRGFTGEPGEPGLSAFSSHGD
RVTMQGPPGVPGPPGPPGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPGGS
SSQEIQQYITDYLKSDNVRHYLTGAQGPPGPPGPPGVITTADGTNLDYAELATRIMSYMT
SSSDRSQSFASSVSTTSVLYQELLDMLQREEIRRYLIGPQGPPGPPGPGGDGMSLSLDYD
ELTRRFISYLTNSGMSIGLPGPPGPPGTPGISYSDVTAYLRNSEFSGLVGPPGPAGPPGP
PGIPGSPGTSLEDVSAYLQSVGYSSFSGVQGPPGPPGPPGPPGFSGTGLLSYADITHSDE
FRSELIQYLKSDEVRSYISGPPGPPGPRGPPGPKGDSGLVSGSMSSSYQGLRTSERLHGG
SLDSEGSDRGSLGTGSSYGSSMSSMSSYSASMGSDGSYDASMGNDGSFDGLLTEEESHRR
SASSSRSYSSSFSGSLDYNELALRVSESLQSQGILQDLMSYTAQGPAGPPGPPGPPGISR
VFAAYGNVTADLMDFFRTYGTIQGPPGEKGERGYPGPKGDPGPMGPPGRHGPRGPKGEKG
EKGKNICHPQESRVYLSGSGGFPRHQSIFGNCWKPTRPHFFLFYFGSFVFFPPHELLK
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaacaaagaaaacgcggcaagatggatcagaagttactgaaagacttatt
acagagactgtaaccacaagattgacgtccttaccacccaaaggaggtagcagcagtggg
ctcaaaacatcatcccacactggaggaagcggagtggaaaagaggtcttacacccatggc
agcagctatgtgacttcaagtggaagtggtagactgaattcatcatcatcaacatcgggc
tacagacaaacccagtctcccagctctactctcacgaaatcacctggctcaacatttgaa
agaaaaacctatgtcaaccgccatgcaacgtatgaagggagctccagtgccaactcttct
cctgagttccccagaaaagagtttgcatctgcctccacgagagggagaagccaaagtcga
gagagtgaaatacgagtccgactgcagagtgcatctccctctggtagatggacagagttg
gatgatgtgaaacgtttgctgaaaggaagtcgatcagccagctgcagccctactcgatca
ccgtcaagtacactcccgataccgaaaaaggctgtggtggagacgaagatggttactgag
agctctcagtcagtgtcagggacatatgatacaactatactgaataccgccctcccttca
tacatgtggtcctccactctgcctgctgggtcttcccttggtggataccataacagctct
tccttgatcaatgctatgtctcactctacaggatcagtttttggtgttccaaataacctg
gctcccagcaatcatactctgaacgcaggcctgagcacttcctctacagtgtttggagtt
caaaacaacctgtctccaagtgcttcatccttgacccagaatgttactgcagcctccgca
gcatatgggatgaagaacacgtctcagaacaacactgcagcaagtactggtgtgtctgcc
tcagcagggggaactgttttgacctcccagggagatgacattctgcgcaaagactgcaag
ttcctgttgctggagaaggagaatgccccagcaaagaaggagatggagctcttgatcatg
acaaaggacagtggcaaagtctttagtgcctccaccactgggcttaatggaggatccttt
gtagaagacaccttgaagaaagagaagcagggattttcctcctcttacgctacagatact
ggcctaaaatcagatgcaaatggagcactgaaatctgtgccaacaagggacaaagcaact
tacgcagaaatacgaaatggtgatgcagggggtgcaattggatcagcaccatcctggtgt
ccctgtcgttcctgctgcagctggtggaaatggctcctgggtttgcttctggcctggttg
cttctccttggattgctttttggcctcattgctctggcggaagaagtgagaaagctgaaa
tctcgtgtggaaaacctggaaaaaatcaatggcggcctcctgacaattaaccaagggaat
ccaaaaatagaaaaggatgtttcaagagtagactttcttcatggtatttcaccctcctca
accttcccttatgaaaatgaagagtcagtttggttgatggtgaagagcagactgaacaag
gaagtagaacgaggctacttccgaggggagagaggagaacctggtgagaaaggtgacatg
ggaatgcaaggtcccagaggagagcgaggacttcctggtgtcccaggcattcctggtcca
attgggcaccaaggaccagagggaccgaaaggacagaaaggcagcatgggtgatcctggc
atggaaggtcccatgggacaaagaggtcgagaagggctaccagggcctcgaggggagcct
ggacccccaggatttggagaaaaaggagacagaggtgcggttggtgagccaggtcctcca
gggccacctggtcccccaggttctgctggccttaaaggtctgatgggttctccaggccca
caaggtcctccaggtcctcccggcctacaaggatttagaggagaagcaggtctcccaggt
gctaaaggtgagaaaggagccagtggagcccctggacccaaaggtgatcagggtgagaag
ggttctcgtggaatgacaggtgaacaaggctcaagaggaatgcctggtcctccaggagag
ccaggggctaaaggacctgtaggacaagctggccgtgatggacagccaggtgaaaaaggt
gaaccaggtcttatgggaatgccaggagtccgaggccctccaggacccactggcgatgca
ggacagccaggtctcacaggaccccaaggaccaccaggacttccaggcaacccaggccga
ccaggggctaaaggagaaactggagctccaggaaaagtcataagtgctgagggttcgtca
actattgctctgccaggcccaccaggtcccccaggcccagccggccccactggaccccca
ggtgttccaggtcctgttggaccagctggtctccctggacagcaaggtccacggggtgag
aagggatccccaggtgaagctgtgatagaaactatcaaaacagaagtctcatcattagca
tctcaaatgatggcagatttacaagggcgagcaggaccaccaggtccccctggaccacca
ggtgaatctgtgcagggaccccctggacctcgtggccccccaggagagggattgccagga
cctccaggcccaccagggagaccatcatcttccatgtccacctcagaaacattcctcaca
ggcccaccaggtccaccaggcccaccaggcccgaagggagaccaaggcgaacgaggtcca
cggggattcacaggagaaccgggtgagcctggcctttcagcgttctcctcccacggtgac
agagttaccatgcagggacctccaggagttccaggtccgccaggcccacctgggcccaaa
ggtgatgcaggtgtcccaggcgctcctggcatcccaggagcatctcgaggtggatccaga
caaattcagggacctccaggacctcctgggccacccggtcctcctggcccaggtggaagt
tcatctcaagagattcagcagtacatcactgactacctaaagagtgacaacgtaaggcat
tatttgactggtgcccaaggcccaccaggccctccaggcccacctggagtcatcaccact
gcggatgggacaaacttggattatgcggagctggctacccgtattatgagctatatgaca
agctcttcagatcgctctcagtcatttgccagttcagtatcaactacatccgttttgtac
caagaacttctggacatgctgcagagagaagaaattcgtcggtatctaattggacctcag
ggcccaccgggacctcctggaccagggggagatggcatgtctctgtcactggattatgat
gagctgaccagacggtttatcagctacttgacaaattctgggatgagcattgggctccct
ggaccacctgggcctccagggacacctggtatatcttacagtgacgtgacagcatacctg
cgaaactctgaattcagtggtcttgttgggccccctggtcctgcagggcccccaggccct
ccagggatccctggatcacctggcacctctctggaggacgtctctgcttacctacaaagt
gtgggatactcctccttctctggagtccagggtccacctggtcctcctggccctccagga
ccaccaggcttctcaggaaccggcctcctgtcctatgctgacatcacccacagtgacgag
ttcaggagtgagctgatccagtacctgaagagtgatgaagttcggagctatatctcaggg
ccacctgggccccctggaccacgaggaccaccaggacccaaaggagatagtggcttggtg
tctgggtctatgtcgtcatcataccaagggttacggacttccgagcggttgcatggagga
tcccttgattctgagggatccgacaggggatcactgggcacaggcagctcatatggcagc
tccatgagcagcatgtcatcttacagtgcctcgatgggcagtgatggctcctatgatgcc
tccatgggcaatgatgggtctttcgatgggttgctgacagaagaggaatcacacaggaga
tcagccagttcaagtagatcctacagcagctccttcagtggttccctggattacaacgag
ctggcactccgcgtgtcagagagcctacagagccaaggtattctccaggacctgatgtct
tacactgcacagggacctgcaggtcctccaggccctcctggtccccctggcatcagcagg
gtctttgcagcctatggcaatgtcaccgcagacctcatggacttctttagaacatatggt
accatccaggggccacccggtgaaaagggagagaggggttatcctggacccaaaggtgac
cctggaccgatggggccgccaggacgccatgggcccaggggaccgaaaggagagaaagga
gagaaaggtaagaacatctgccatccccaggagagcagggtttacctgtcagggagtgga
ggcttccccaggcaccagtccatctttgggaactgctggaaacctacaaggcctcatttt
tttttattttattttggttcttttgtcttttttcccccacatgaacttttaaaataa
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integrated database retrieval system
