Larus michahellis (yellow-legged gull): 141745962
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Entry
141745962 CDS
T11135
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
lmic Larus michahellis (yellow-legged gull)
Pathway
lmic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lmic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141745962 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lmic03041
]
141745962 (SF3B1)
03036 Chromosome and associated proteins [BR:
lmic03036
]
141745962 (SF3B1)
Spliceosome [BR:
lmic03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
141745962 (SF3B1)
Complex B
141745962 (SF3B1)
Complex C
U2 SnRNP specific factors
141745962 (SF3B1)
Chromosome and associated proteins [BR:
lmic03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
141745962 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
141745962
NCBI-ProteinID:
XP_074449609
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Position
7:complement(26909960..26933363)
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AA seq
1301 aa
AA seq
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MAKIAKTHEDIEAQIREIQGKKPALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYPSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPQKIADREDEYKK
HRRMMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGEL
KVVNGAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGS
ETPGATPGSKIWDPTPSHTPAGAATPGRDTPGHATPGHGGATSSARKNRWDETPKTERDT
PGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTP
AMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVP
IRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVD
ESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPT
LEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKA
AGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHT
GIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIES
FDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEE
MKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANK
VGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQ
TTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMK
TCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPI
LKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGY
IAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNV
QNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFG
CEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRD
VYWKIYNSIYIGSQDALIAHYPRIYNDEKNTYIRYELDYIL
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagacccacgaagatattgaagcacaaattcgagaaattcaaggg
aagaagcctgctcttgatgaagcacaaggagtaggccttgattccacaggatattatgat
caagaaatttatggtggcagtgacagcaggtttgctggatacgtcacttctattgcagca
actgaattggaagacgatgatgatgactacccttctacaagtttgcttggccagaagaag
ccagggtaccatgctccagtggcattgcttaatgacataccacaatctaccgaacagtat
gatccttttgcagaacaccgtcctcaaaagattgcagatcgggaagatgagtacaaaaag
cacaggcggatgatgataatttcccctgagcgtcttgatccttttgcagatggagggaag
acaccagatcctaaaatgaatgccagaacatacatggatgttatgcgtgaacaacattta
acaaaagaagagagggagattaggcaacaactagctgaaaaagctaaagctggagagctt
aaagtcgtcaatggagctgcatctcagccaccttcaaaacgcaaacggcgttgggatcag
acagctgatcagactcctggtgctacacctaaaaaattatccagttgggatcaagcagag
actcctggacacacaccatctctgcgatgggatgaaactccaggccgtgcaaagggtagc
gaaactcctggtgccaccccaggctcaaaaatatgggatccgactcccagccatacacca
gcaggagccgcaacacctggacgggatacgcctggtcatgcaacaccaggtcatggaggt
gccacttccagtgcacgtaaaaaccgatgggatgaaacacctaaaacagaaagagatacg
ccgggacatggcagtggatgggctgagacacctcgtacagatcgaggtggtgactccatt
ggtgagacaccaaccccaggagcaagtaaaagaaagtcacgatgggatgaaacacctgct
agccagatgggcggcagcactcctgttctgacacctggcaaaacacccattggtacacca
gctatgaacatggcaactcctacaccaggtcatatcatgagcatgactccagaacagctg
caggcttggcgttgggaaagggaaattgatgagagaaacagaccactttctgatgaagag
ttggatgctatgtttccagaaggatataaggttcttcccccaccagctggttatgtacct
attcgcactccagctcgtaagcttacagcaactccgacacctttgggtggtatgactgga
ttccacatgcagacagaagaccggactatgaagagtgttaatgaccagccctctggcaat
cttccattcttaaaaccagatgatatccaatactttgataaactgctggttgatgttgat
gaatcaactttgagtcctgaagaacagaaggagagaaaaataatgaaattacttttgaaa
ataaagaatggcacacctcccatgagaaaggctgcattgagacaaattactgataaagct
cgggaatttggagcagggccgttgtttaatcagattctgcccctgctcatgtcaccgaca
cttgaagatcaggagcgtcacttgcttgtcaaagtcatcgacaggattctttacaaactg
gatgacttggtccgaccatatgtccacaagatccttgttgtcattgaaccgctgctgatt
gatgaagactactatgctagagtggaaggcagagaaatcatttcaaacttggctaaggct
gctggtttggcaacaatgatctccacaatgcgacctgatattgataacatggatgaatat
gtccgaaatacaacagctcgagcctttgctgttgttgcctctgctttgggcattccttcc
ctgttacccttcttgaaagctgtgtgtaaaagcaaaaagtcctggcaagctaggcacact
ggcatcaagattgtacagcagattgctattcttatgggttgtgctatcttgcctcatctc
aggagcttggttgaaattattgaacatggtctggtggatgagcagcagaaagttcgcacc
atcagtgctttggctattgctgctttggctgaggcagctaccccctatggtattgagtca
tttgattctgttctgaagcctttatggaagggtatacgtcaacacagaggaaagggtttg
gctgcgtttttgaaggctattggttacctgattccactcatggatgctgagtatgcaaac
tattataccagagaagtcatgcttatccttatcagagagttccagtctcctgatgaagag
atgaaaaaaattgtgttgaaggtggtaaagcaatgttgtggtacggatggtgtggaagca
aactatattaaaacagaaatcttgccaccttttttcaaacacttctggcagcacagaatg
gcattggacagaagaaattacagacagttggttgatacaactgtggagctggcaaataaa
gttggagcagcagaaattatttctagaattgtggatgatctgaaagatgaggctgagcag
tacaggaaaatggtcatggaaacaattgagaagataatgggaaatctgggagctgcagac
attgatcataaactggaagaacaacttattgatggtatcttgtacgccttccaggaacag
accacagaggattctgtgatgctgaatggttttggcacagtggttaatgctctgggcaaa
agagtaaaaccctacttgccacaaatctgtggtacagttttgtggcgtttgaacaacaaa
tcagctaaagttaggcaacaggctgctgacctgatctctcgtactgcagttgtcatgaag
acttgtcaagaggaaaaactgatgggacacttgggtgttgtgctgtatgagtacctgggt
gaagaatatcccgaagtactgggcagcatacttggagcacttaaggctattgtgaatgtt
ataggtatgcacaagatgacaccaccaatcaaagatctgctgccacgacttacacctatt
ttgaagaacagacatgagaaagtacaggaaaactgtattgatcttgttgggcgtattgca
gacagaggtgcagaatatgtttctgcaagagaatggatgaggatctgctttgaattgctt
gaattattaaaagctcacaagaaggctatccgaagagccacagtgaacacttttggttat
attgcaaaagctattggacctcacgatgtattggctacactgctaaacaacttgaaagta
caggaaaggcagaacagagtatgtactacagtagcaattgctattgtagctgaaacatgc
tcacctttcacagtgctgcctgcactcatgaatgaatacagagttccagaactgaatgtc
cagaatggtgtgttaaaatctctttctttcctgtttgaatacattggcgagatgggaaaa
gattacatctacgctgttacaccgttgcttgaagatgctttaatggacagggatcttgta
cacagacaaacagccagtgccgtggtgcaacatatgtctcttggtgtttatgggtttggc
tgtgaagactctcttaatcatttgttaaattacgtatggcctaatgtgtttgaaacctct
cctcacgtcattcaggcagttatgggggctctggaaggcctcagagttgctatcggtccc
tgcagaatgctgcagtattgtttacagggtttgtttcaccctgccaggaaagtcagagat
gtttattggaagatctataattcaatctacatcggatcacaggatgctctgatagcacat
tatccaagaatttataacgatgaaaagaacacctatattcgctatgaacttgattacatc
ttataa
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